RNA–Protein interactions for RNA: ENST00000460302.1

PRRC2A-203, Transcript of proline rich coiled-coil 2A, humanhuman

TSL 3

Gene PRRC2A, Length 697 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2A-203ENST00000460302 NISCHQ9Y2I1 1504 aa28.63■■■□□ 2.17
PRRC2A-203ENST00000460302 CCDC180Q9P1Z9 1646 aa25.6■■□□□ 1.69
PRRC2A-203ENST00000460302 ABCC9O60706 1549 aa25.11■■□□□ 1.61
PRRC2A-203ENST00000460302 RB1CC1Q8TDY2 1594 aa24.18■■□□□ 1.46
PRRC2A-203ENST00000460302 NACADO15069 1562 aa24.12■■□□□ 1.45
PRRC2A-203ENST00000460302 DCAF8L2P0C7V8 631 aa23.96■■□□□ 1.43
PRRC2A-203ENST00000460302 MYO15BQ96JP2 1530 aa23.95■■□□□ 1.43
PRRC2A-203ENST00000460302 ZCCHC6Q5VYS8 1495 aaKnown RBP23.79■■□□□ 1.4
PRRC2A-203ENST00000460302 DCAF1Q9Y4B6 1507 aa23.75■■□□□ 1.39
PRRC2A-203ENST00000460302 UNC13AQ9UPW8 1703 aa23.57■■□□□ 1.36
PRRC2A-203ENST00000460302 PABPN1Q86U42 306 aaKnown RBP eCLIP23.41■■□□□ 1.34
PRRC2A-203ENST00000460302 BICRAQ9NZM4 1560 aa23.37■■□□□ 1.33
PRRC2A-203ENST00000460302 SHROOM4Q9ULL8 1493 aa23.26■■□□□ 1.31
PRRC2A-203ENST00000460302 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
PRRC2A-203ENST00000460302 DNAJC5BQ9UF47 199 aa23.18■■□□□ 1.3
PRRC2A-203ENST00000460302 EIF4G1Q04637 1599 aaKnown RBP22.8■■□□□ 1.24
PRRC2A-203ENST00000460302 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
PRRC2A-203ENST00000460302 CECR2Q9BXF3 1484 aa22.63■■□□□ 1.21
PRRC2A-203ENST00000460302 SMARCA4P51532 1647 aa22.24■■□□□ 1.15
PRRC2A-203ENST00000460302 BAZ1AQ9NRL2 1556 aaPredicted RBP22.24■■□□□ 1.15
PRRC2A-203ENST00000460302 NCAPD3P42695 1498 aa22.23■■□□□ 1.15
PRRC2A-203ENST00000460302 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
PRRC2A-203ENST00000460302 ATAD2BQ9ULI0 1458 aa22.17■■□□□ 1.14
PRRC2A-203ENST00000460302 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
PRRC2A-203ENST00000460302 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.12
PRRC2A-203ENST00000460302 MROH2BQ7Z745 1585 aa22■■□□□ 1.11
PRRC2A-203ENST00000460302 BAZ1BQ9UIG0 1483 aaKnown RBP22■■□□□ 1.11
PRRC2A-203ENST00000460302 WIZO95785 1651 aa21.76■■□□□ 1.07
PRRC2A-203ENST00000460302 ERCC6Q03468 1493 aa21.72■■□□□ 1.07
PRRC2A-203ENST00000460302 RSF1Q96T23 1441 aaPredicted RBP21.71■■□□□ 1.07
PRRC2A-203ENST00000460302 LAMC3Q9Y6N6 1575 aa21.7■■□□□ 1.06
PRRC2A-203ENST00000460302 NESP48681 1621 aa21.65■■□□□ 1.06
PRRC2A-203ENST00000460302 CUX2O14529 1486 aa21.61■■□□□ 1.05
PRRC2A-203ENST00000460302 CADPSQ9ULU8 1353 aa21.57■■□□□ 1.04
PRRC2A-203ENST00000460302 PDS5BQ9NTI5 1447 aa21.56■■□□□ 1.04
PRRC2A-203ENST00000460302 TOP2AP11388 1531 aaKnown RBP21.56■■□□□ 1.04
PRRC2A-203ENST00000460302 KIF21AQ7Z4S6 1674 aa21.44■■□□□ 1.02
PRRC2A-203ENST00000460302 THOC2Q8NI27 1593 aaKnown RBP21.41■■□□□ 1.02
PRRC2A-203ENST00000460302 CFTRP13569 1480 aa21.39■■□□□ 1.02
PRRC2A-203ENST00000460302 MRC2Q9UBG0 1479 aa21.31■■□□□ 1
PRRC2A-203ENST00000460302 CEP164Q9UPV0 1460 aa21.31■■□□□ 1
PRRC2A-203ENST00000460302 FANCD2Q9BXW9 1451 aa21.29■■□□□ 1
PRRC2A-203ENST00000460302 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
PRRC2A-203ENST00000460302 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
PRRC2A-203ENST00000460302 WDR62O43379 1518 aa21.24■□□□□ 0.99
PRRC2A-203ENST00000460302 DNAJC5Q9H3Z4 198 aa21.15■□□□□ 0.98
PRRC2A-203ENST00000460302 URB2Q14146 1524 aaKnown RBP21.05■□□□□ 0.96
PRRC2A-203ENST00000460302 ABCC8Q09428 1581 aa21.03■□□□□ 0.96
PRRC2A-203ENST00000460302 SUPT5HO00267 1087 aaKnown RBP20.97■□□□□ 0.95
PRRC2A-203ENST00000460302 TOPBP1Q92547 1522 aa20.92■□□□□ 0.94
PRRC2A-203ENST00000460302 DNMBPQ6XZF7 1577 aa20.9■□□□□ 0.94
PRRC2A-203ENST00000460302 IFT140Q96RY7 1462 aa20.88■□□□□ 0.93
PRRC2A-203ENST00000460302 AEBP2Q6ZN18 517 aaPredicted RBP20.74■□□□□ 0.91
PRRC2A-203ENST00000460302 POLA1P09884 1462 aaPredicted RBP20.72■□□□□ 0.91
PRRC2A-203ENST00000460302 TARBP1Q13395 1621 aaKnown RBP20.71■□□□□ 0.91
PRRC2A-203ENST00000460302 ZNF608Q9ULD9 1512 aaPredicted RBP20.71■□□□□ 0.91
PRRC2A-203ENST00000460302 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
PRRC2A-203ENST00000460302 SOGA1O94964 1423 aa20.67■□□□□ 0.9
PRRC2A-203ENST00000460302 CUX1P39880 1505 aa20.67■□□□□ 0.9
PRRC2A-203ENST00000460302 EIF4G3O43432 1585 aaKnown RBP20.66■□□□□ 0.9
PRRC2A-203ENST00000460302 WDR97A6NE52 1622 aa20.64■□□□□ 0.9
PRRC2A-203ENST00000460302 FGD5Q6ZNL6 1462 aa20.64■□□□□ 0.89
PRRC2A-203ENST00000460302 AQRO60306 1485 aaKnown RBP eCLIP20.59■□□□□ 0.892e-10■■■■■ 36.8
PRRC2A-203ENST00000460302 RAD54L2Q9Y4B4 1467 aa20.59■□□□□ 0.89
PRRC2A-203ENST00000460302 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
PRRC2A-203ENST00000460302 WRNQ14191 1432 aaPredicted RBP eCLIP20.5■□□□□ 0.87
PRRC2A-203ENST00000460302 TOP2BQ02880 1626 aa20.49■□□□□ 0.87
PRRC2A-203ENST00000460302 BIVM-ERCC5R4GMW8 1640 aa20.49■□□□□ 0.87
PRRC2A-203ENST00000460302 ABCA10Q8WWZ4 1543 aa20.47■□□□□ 0.87
PRRC2A-203ENST00000460302 GRIN2BQ13224 1484 aa20.46■□□□□ 0.87
PRRC2A-203ENST00000460302 MAGI1Q96QZ7 1491 aaPredicted RBP20.45■□□□□ 0.86
PRRC2A-203ENST00000460302 CHD1O14646 1710 aa20.44■□□□□ 0.86
PRRC2A-203ENST00000460302 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
PRRC2A-203ENST00000460302 FBLN2P98095 1184 aa20.41■□□□□ 0.86
PRRC2A-203ENST00000460302 SYNJ1O43426 1573 aa20.4■□□□□ 0.86
PRRC2A-203ENST00000460302 SNAPC4Q5SXM2 1469 aa20.4■□□□□ 0.86
PRRC2A-203ENST00000460302 PBRM1Q86U86 1689 aa20.38■□□□□ 0.85
PRRC2A-203ENST00000460302 ABCA5Q8WWZ7 1642 aa20.38■□□□□ 0.85
PRRC2A-203ENST00000460302 CHMP7Q8WUX9 453 aaPredicted RBP20.37■□□□□ 0.85
PRRC2A-203ENST00000460302 SYNJ2O15056 1496 aa20.36■□□□□ 0.85
PRRC2A-203ENST00000460302 RIMBP3CA6NJZ7 1639 aa20.3■□□□□ 0.84
PRRC2A-203ENST00000460302 RIMBP3BA6NNM3 1639 aa20.3■□□□□ 0.84
PRRC2A-203ENST00000460302 RIMBP3Q9UFD9 1639 aa20.3■□□□□ 0.84
PRRC2A-203ENST00000460302 TRIM41Q8WV44 630 aa20.29■□□□□ 0.84
PRRC2A-203ENST00000460302 ARHGEF11O15085 1522 aa20.27■□□□□ 0.84
PRRC2A-203ENST00000460302 ERICH3Q5RHP9 1530 aa20.25■□□□□ 0.83
PRRC2A-203ENST00000460302 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
PRRC2A-203ENST00000460302 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
PRRC2A-203ENST00000460302 ADAMTS12P58397 1594 aa20.19■□□□□ 0.82
PRRC2A-203ENST00000460302 GRIN2AQ12879 1464 aa20.18■□□□□ 0.82
PRRC2A-203ENST00000460302 KIF27Q86VH2 1401 aa20.12■□□□□ 0.81
PRRC2A-203ENST00000460302 CYB5RLQ6IPT4 315 aa20.1■□□□□ 0.81
PRRC2A-203ENST00000460302 NUP160Q12769 1436 aa20.1■□□□□ 0.81
PRRC2A-203ENST00000460302 ARAP1Q96P48 1450 aa20.08■□□□□ 0.81
PRRC2A-203ENST00000460302 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
PRRC2A-203ENST00000460302 CUL7Q14999 1698 aa20.03■□□□□ 0.8
PRRC2A-203ENST00000460302 IGF1RP08069 1367 aa20.02■□□□□ 0.8
PRRC2A-203ENST00000460302 SHROOM2Q13796 1616 aa19.98■□□□□ 0.79
PRRC2A-203ENST00000460302 CARMIL1Q5VZK9 1371 aa19.92■□□□□ 0.78
PRRC2A-203ENST00000460302 JPH4Q96JJ6 628 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms