RNA–Protein interactions for RNA: ENST00000460299.1

PPP1R21-208, Transcript of protein phosphatase 1 regulatory subunit 21, humanhuman

TSL 2

Gene PPP1R21, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R21-208ENST00000460299 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
PPP1R21-208ENST00000460299 ABCC9O60706 1549 aa26.59■■□□□ 1.85
PPP1R21-208ENST00000460299 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
PPP1R21-208ENST00000460299 RB1CC1Q8TDY2 1594 aa25.32■■□□□ 1.64
PPP1R21-208ENST00000460299 NACADO15069 1562 aa25.18■■□□□ 1.62
PPP1R21-208ENST00000460299 DNAJC5BQ9UF47 199 aa25.03■■□□□ 1.6
PPP1R21-208ENST00000460299 DCAF8L2P0C7V8 631 aa24.99■■□□□ 1.59
PPP1R21-208ENST00000460299 MYO15BQ96JP2 1530 aa24.88■■□□□ 1.57
PPP1R21-208ENST00000460299 PABPN1Q86U42 306 aaKnown RBP eCLIP24.78■■□□□ 1.56
PPP1R21-208ENST00000460299 UNC13AQ9UPW8 1703 aa24.67■■□□□ 1.54
PPP1R21-208ENST00000460299 BICRAQ9NZM4 1560 aa24.59■■□□□ 1.53
PPP1R21-208ENST00000460299 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
PPP1R21-208ENST00000460299 DCAF1Q9Y4B6 1507 aa24.54■■□□□ 1.52
PPP1R21-208ENST00000460299 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
PPP1R21-208ENST00000460299 SCRIBQ14160 1630 aa24.17■■□□□ 1.46
PPP1R21-208ENST00000460299 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
PPP1R21-208ENST00000460299 CECR2Q9BXF3 1484 aa23.99■■□□□ 1.43
PPP1R21-208ENST00000460299 EIF4G1Q04637 1599 aaKnown RBP23.99■■□□□ 1.43
PPP1R21-208ENST00000460299 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
PPP1R21-208ENST00000460299 ATAD2BQ9ULI0 1458 aa23.17■■□□□ 1.3
PPP1R21-208ENST00000460299 SMARCA4P51532 1647 aa23.1■■□□□ 1.29
PPP1R21-208ENST00000460299 SMARCA2P51531 1590 aa23.09■■□□□ 1.29
PPP1R21-208ENST00000460299 HMGXB3Q12766 1538 aa23.06■■□□□ 1.28
PPP1R21-208ENST00000460299 DNAJC5Q9H3Z4 198 aa23.02■■□□□ 1.28
PPP1R21-208ENST00000460299 BAZ1AQ9NRL2 1556 aaPredicted RBP23.01■■□□□ 1.27
PPP1R21-208ENST00000460299 CUX2O14529 1486 aa22.98■■□□□ 1.27
PPP1R21-208ENST00000460299 ERCC6Q03468 1493 aa22.96■■□□□ 1.27
PPP1R21-208ENST00000460299 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
PPP1R21-208ENST00000460299 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
PPP1R21-208ENST00000460299 NESP48681 1621 aa22.84■■□□□ 1.25
PPP1R21-208ENST00000460299 MROH2BQ7Z745 1585 aa22.83■■□□□ 1.25
PPP1R21-208ENST00000460299 LAMC3Q9Y6N6 1575 aa22.7■■□□□ 1.22
PPP1R21-208ENST00000460299 THOC2Q8NI27 1593 aaKnown RBP22.61■■□□□ 1.21
PPP1R21-208ENST00000460299 PDS5BQ9NTI5 1447 aa22.6■■□□□ 1.21
PPP1R21-208ENST00000460299 CADPSQ9ULU8 1353 aa22.56■■□□□ 1.2
PPP1R21-208ENST00000460299 WIZO95785 1651 aa22.51■■□□□ 1.19
PPP1R21-208ENST00000460299 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
PPP1R21-208ENST00000460299 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.17
PPP1R21-208ENST00000460299 MRC2Q9UBG0 1479 aa22.38■■□□□ 1.17
PPP1R21-208ENST00000460299 WDR62O43379 1518 aa22.33■■□□□ 1.17
PPP1R21-208ENST00000460299 CFTRP13569 1480 aa22.29■■□□□ 1.16
PPP1R21-208ENST00000460299 CEP164Q9UPV0 1460 aa22.28■■□□□ 1.16
PPP1R21-208ENST00000460299 TOP2AP11388 1531 aaKnown RBP22.26■■□□□ 1.15
PPP1R21-208ENST00000460299 FANCD2Q9BXW9 1451 aa22.26■■□□□ 1.15
PPP1R21-208ENST00000460299 URB2Q14146 1524 aaKnown RBP22.08■■□□□ 1.13
PPP1R21-208ENST00000460299 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
PPP1R21-208ENST00000460299 PRDM2Q13029 1718 aa21.94■■□□□ 1.1
PPP1R21-208ENST00000460299 OSCARQ8IYS5 282 aa21.94■■□□□ 1.1
PPP1R21-208ENST00000460299 TRIM41Q8WV44 630 aa21.91■■□□□ 1.1
PPP1R21-208ENST00000460299 IFT140Q96RY7 1462 aa21.86■■□□□ 1.09
PPP1R21-208ENST00000460299 TOPBP1Q92547 1522 aa21.84■■□□□ 1.09
PPP1R21-208ENST00000460299 ABCC8Q09428 1581 aa21.82■■□□□ 1.08
PPP1R21-208ENST00000460299 ZNF608Q9ULD9 1512 aaPredicted RBP21.8■■□□□ 1.08
PPP1R21-208ENST00000460299 DNMBPQ6XZF7 1577 aa21.74■■□□□ 1.07
PPP1R21-208ENST00000460299 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
PPP1R21-208ENST00000460299 TARBP1Q13395 1621 aaKnown RBP21.64■■□□□ 1.05
PPP1R21-208ENST00000460299 AQRO60306 1485 aaKnown RBP eCLIP21.62■■□□□ 1.05
PPP1R21-208ENST00000460299 POLA1P09884 1462 aaPredicted RBP21.62■■□□□ 1.05
PPP1R21-208ENST00000460299 RIMBP3CA6NJZ7 1639 aa21.58■■□□□ 1.04
PPP1R21-208ENST00000460299 RIMBP3BA6NNM3 1639 aa21.58■■□□□ 1.04
PPP1R21-208ENST00000460299 RIMBP3Q9UFD9 1639 aa21.58■■□□□ 1.04
PPP1R21-208ENST00000460299 ARHGEF11O15085 1522 aa21.54■■□□□ 1.04
PPP1R21-208ENST00000460299 SOGA1O94964 1423 aa21.53■■□□□ 1.04
PPP1R21-208ENST00000460299 RAD54L2Q9Y4B4 1467 aa21.52■■□□□ 1.04
PPP1R21-208ENST00000460299 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
PPP1R21-208ENST00000460299 FGD5Q6ZNL6 1462 aa21.46■■□□□ 1.03
PPP1R21-208ENST00000460299 FBLN2P98095 1184 aa21.45■■□□□ 1.02
PPP1R21-208ENST00000460299 CHD1O14646 1710 aa21.45■■□□□ 1.02
PPP1R21-208ENST00000460299 CUX1P39880 1505 aa21.45■■□□□ 1.02
PPP1R21-208ENST00000460299 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
PPP1R21-208ENST00000460299 CYB5RLQ6IPT4 315 aa21.4■■□□□ 1.02
PPP1R21-208ENST00000460299 SNAPC4Q5SXM2 1469 aa21.37■■□□□ 1.01
PPP1R21-208ENST00000460299 MAGI1Q96QZ7 1491 aaPredicted RBP21.35■■□□□ 1.01
PPP1R21-208ENST00000460299 GRIN2BQ13224 1484 aa21.34■■□□□ 1.01
PPP1R21-208ENST00000460299 ARAP1Q96P48 1450 aa21.33■■□□□ 1.01
PPP1R21-208ENST00000460299 CHMP7Q8WUX9 453 aaPredicted RBP21.33■■□□□ 1.01
PPP1R21-208ENST00000460299 SUPT5HO00267 1087 aaKnown RBP21.32■■□□□ 1
PPP1R21-208ENST00000460299 CLASP1Q7Z460 1538 aa21.29■■□□□ 1
PPP1R21-208ENST00000460299 SYNJ2O15056 1496 aa21.27■■□□□ 1
PPP1R21-208ENST00000460299 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
PPP1R21-208ENST00000460299 ABCA10Q8WWZ4 1543 aa21.25■□□□□ 0.99
PPP1R21-208ENST00000460299 SYNJ1O43426 1573 aa21.25■□□□□ 0.99
PPP1R21-208ENST00000460299 ABCA5Q8WWZ7 1642 aa21.18■□□□□ 0.98
PPP1R21-208ENST00000460299 PBRM1Q86U86 1689 aa21.17■□□□□ 0.98
PPP1R21-208ENST00000460299 WRNQ14191 1432 aaPredicted RBP eCLIP21.16■□□□□ 0.98
PPP1R21-208ENST00000460299 TRHP20396 242 aaPredicted RBP21.13■□□□□ 0.97
PPP1R21-208ENST00000460299 TOP2BQ02880 1626 aa21.1■□□□□ 0.97
PPP1R21-208ENST00000460299 BIVM-ERCC5R4GMW8 1640 aa21.08■□□□□ 0.97
PPP1R21-208ENST00000460299 GRIN2AQ12879 1464 aa21.06■□□□□ 0.96
PPP1R21-208ENST00000460299 NUP160Q12769 1436 aa21.02■□□□□ 0.96
PPP1R21-208ENST00000460299 FHAD1B1AJZ9 1412 aa21.01■□□□□ 0.95
PPP1R21-208ENST00000460299 ADAMTS12P58397 1594 aa21.01■□□□□ 0.95
PPP1R21-208ENST00000460299 ERICH3Q5RHP9 1530 aa20.99■□□□□ 0.95
PPP1R21-208ENST00000460299 CEP170Q5SW79 1584 aa20.96■□□□□ 0.95
PPP1R21-208ENST00000460299 ERCC6L2Q5T890 1561 aa20.92■□□□□ 0.94
PPP1R21-208ENST00000460299 SHROOM2Q13796 1616 aa20.89■□□□□ 0.93
PPP1R21-208ENST00000460299 JPH4Q96JJ6 628 aa20.81■□□□□ 0.92
PPP1R21-208ENST00000460299 PRG4Q92954 1404 aaPredicted RBP20.79■□□□□ 0.92
PPP1R21-208ENST00000460299 IGF1RP08069 1367 aa20.74■□□□□ 0.91
PPP1R21-208ENST00000460299 RUSC2Q8N2Y8 1516 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms