RNA–Protein interactions for RNA: ENST00000460207.1

RUNX1-209, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-209ENST00000460207 NISCHQ9Y2I1 1504 aa40.89■■■■■ 4.14
RUNX1-209ENST00000460207 CCDC180Q9P1Z9 1646 aa36.65■■■■□ 3.46
RUNX1-209ENST00000460207 ABCC9O60706 1549 aa36.6■■■■□ 3.45
RUNX1-209ENST00000460207 RB1CC1Q8TDY2 1594 aa34.91■■■■□ 3.18
RUNX1-209ENST00000460207 NACADO15069 1562 aa34.71■■■■□ 3.15
RUNX1-209ENST00000460207 DCAF8L2P0C7V8 631 aa34.53■■■■□ 3.12
RUNX1-209ENST00000460207 DNAJC5BQ9UF47 199 aa34.41■■■■□ 3.1
RUNX1-209ENST00000460207 MYO15BQ96JP2 1530 aa34.3■■■■□ 3.08
RUNX1-209ENST00000460207 PABPN1Q86U42 306 aaKnown RBP eCLIP34.13■■■■□ 3.05
RUNX1-209ENST00000460207 UNC13AQ9UPW8 1703 aa34.01■■■■□ 3.04
RUNX1-209ENST00000460207 ZCCHC6Q5VYS8 1495 aaKnown RBP33.86■■■■□ 3.01
RUNX1-209ENST00000460207 BICRAQ9NZM4 1560 aa33.85■■■■□ 3.01
RUNX1-209ENST00000460207 DCAF1Q9Y4B6 1507 aa33.84■■■■□ 3.01
RUNX1-209ENST00000460207 SHROOM4Q9ULL8 1493 aa33.5■■■□□ 2.95
RUNX1-209ENST00000460207 SCRIBQ14160 1630 aa33.31■■■□□ 2.92
RUNX1-209ENST00000460207 CC2D2AQ9P2K1 1620 aa33.08■■■□□ 2.89
RUNX1-209ENST00000460207 EIF4G1Q04637 1599 aaKnown RBP33.02■■■□□ 2.88
RUNX1-209ENST00000460207 CECR2Q9BXF3 1484 aa33.02■■■□□ 2.88
RUNX1-209ENST00000460207 NCAPD3P42695 1498 aa32.08■■■□□ 2.73
RUNX1-209ENST00000460207 ATAD2BQ9ULI0 1458 aa31.93■■■□□ 2.7
RUNX1-209ENST00000460207 SMARCA4P51532 1647 aa31.85■■■□□ 2.69
RUNX1-209ENST00000460207 SMARCA2P51531 1590 aa31.85■■■□□ 2.69
RUNX1-209ENST00000460207 HMGXB3Q12766 1538 aa31.77■■■□□ 2.68
RUNX1-209ENST00000460207 BAZ1AQ9NRL2 1556 aaPredicted RBP31.73■■■□□ 2.67
RUNX1-209ENST00000460207 DNAJC5Q9H3Z4 198 aa31.66■■■□□ 2.66
RUNX1-209ENST00000460207 ERCC6Q03468 1493 aa31.63■■■□□ 2.65
RUNX1-209ENST00000460207 CUX2O14529 1486 aa31.62■■■□□ 2.65
RUNX1-209ENST00000460207 PEG3Q9GZU2 1588 aa31.6■■■□□ 2.65
RUNX1-209ENST00000460207 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
RUNX1-209ENST00000460207 MROH2BQ7Z745 1585 aa31.47■■■□□ 2.63
RUNX1-209ENST00000460207 NESP48681 1621 aa31.44■■■□□ 2.62
RUNX1-209ENST00000460207 LAMC3Q9Y6N6 1575 aa31.29■■■□□ 2.6
RUNX1-209ENST00000460207 PDS5BQ9NTI5 1447 aa31.16■■■□□ 2.58
RUNX1-209ENST00000460207 CADPSQ9ULU8 1353 aa31.1■■■□□ 2.57
RUNX1-209ENST00000460207 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
RUNX1-209ENST00000460207 WIZO95785 1651 aa31.05■■■□□ 2.56
RUNX1-209ENST00000460207 KIF21AQ7Z4S6 1674 aa30.99■■■□□ 2.55
RUNX1-209ENST00000460207 RSF1Q96T23 1441 aaPredicted RBP30.88■■■□□ 2.53
RUNX1-209ENST00000460207 MRC2Q9UBG0 1479 aa30.82■■■□□ 2.52
RUNX1-209ENST00000460207 WDR62O43379 1518 aa30.73■■■□□ 2.51
RUNX1-209ENST00000460207 CFTRP13569 1480 aa30.72■■■□□ 2.51
RUNX1-209ENST00000460207 CEP164Q9UPV0 1460 aa30.7■■■□□ 2.51
RUNX1-209ENST00000460207 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
RUNX1-209ENST00000460207 FANCD2Q9BXW9 1451 aa30.68■■■□□ 2.5
RUNX1-209ENST00000460207 URB2Q14146 1524 aaKnown RBP30.41■■■□□ 2.46
RUNX1-209ENST00000460207 CCDC88BA6NC98 1476 aa30.39■■■□□ 2.46
RUNX1-209ENST00000460207 PRDM2Q13029 1718 aa30.3■■■□□ 2.44
RUNX1-209ENST00000460207 OSCARQ8IYS5 282 aa30.26■■■□□ 2.43
RUNX1-209ENST00000460207 TRIM41Q8WV44 630 aa30.15■■■□□ 2.42
RUNX1-209ENST00000460207 ABCC8Q09428 1581 aa30.13■■■□□ 2.41
RUNX1-209ENST00000460207 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
RUNX1-209ENST00000460207 TOPBP1Q92547 1522 aa30.09■■■□□ 2.41
RUNX1-209ENST00000460207 ZNF608Q9ULD9 1512 aaPredicted RBP30.01■■■□□ 2.4
RUNX1-209ENST00000460207 DNMBPQ6XZF7 1577 aa29.97■■■□□ 2.39
RUNX1-209ENST00000460207 TARBP1Q13395 1621 aaKnown RBP29.81■■■□□ 2.36
RUNX1-209ENST00000460207 EIF4G3O43432 1585 aaKnown RBP29.8■■■□□ 2.36
RUNX1-209ENST00000460207 AQRO60306 1485 aaKnown RBP eCLIP29.79■■■□□ 2.36
RUNX1-209ENST00000460207 POLA1P09884 1462 aaPredicted RBP29.79■■■□□ 2.36
RUNX1-209ENST00000460207 SOGA1O94964 1423 aa29.71■■■□□ 2.35
RUNX1-209ENST00000460207 RIMBP3CA6NJZ7 1639 aa29.7■■■□□ 2.34
RUNX1-209ENST00000460207 RIMBP3BA6NNM3 1639 aa29.7■■■□□ 2.34
RUNX1-209ENST00000460207 RIMBP3Q9UFD9 1639 aa29.7■■■□□ 2.34
RUNX1-209ENST00000460207 RAD54L2Q9Y4B4 1467 aa29.66■■■□□ 2.34
RUNX1-209ENST00000460207 ARHGEF11O15085 1522 aa29.64■■■□□ 2.34
RUNX1-209ENST00000460207 TDRD9Q8NDG6 1382 aaKnown RBP29.62■■■□□ 2.33
RUNX1-209ENST00000460207 FBLN2P98095 1184 aa29.6■■■□□ 2.33
RUNX1-209ENST00000460207 FGD5Q6ZNL6 1462 aa29.58■■■□□ 2.33
RUNX1-209ENST00000460207 CHD1O14646 1710 aa29.57■■■□□ 2.32
RUNX1-209ENST00000460207 CUX1P39880 1505 aa29.56■■■□□ 2.32
RUNX1-209ENST00000460207 WDR97A6NE52 1622 aa29.56■■■□□ 2.32
RUNX1-209ENST00000460207 SUPT5HO00267 1087 aaKnown RBP29.5■■■□□ 2.31
RUNX1-209ENST00000460207 CYB5RLQ6IPT4 315 aa29.5■■■□□ 2.31
RUNX1-209ENST00000460207 CHMP7Q8WUX9 453 aaPredicted RBP29.44■■■□□ 2.3
RUNX1-209ENST00000460207 SNAPC4Q5SXM2 1469 aa29.43■■■□□ 2.3
RUNX1-209ENST00000460207 MAGI1Q96QZ7 1491 aaPredicted RBP29.43■■■□□ 2.3
RUNX1-209ENST00000460207 GRIN2BQ13224 1484 aa29.42■■■□□ 2.3
RUNX1-209ENST00000460207 ARAP1Q96P48 1450 aa29.34■■■□□ 2.29
RUNX1-209ENST00000460207 SYNJ2O15056 1496 aa29.32■■■□□ 2.28
RUNX1-209ENST00000460207 GAPVD1Q14C86 1478 aa29.32■■■□□ 2.28
RUNX1-209ENST00000460207 ABCA10Q8WWZ4 1543 aa29.3■■■□□ 2.28
RUNX1-209ENST00000460207 SYNJ1O43426 1573 aa29.29■■■□□ 2.28
RUNX1-209ENST00000460207 CLASP1Q7Z460 1538 aa29.29■■■□□ 2.28
RUNX1-209ENST00000460207 WRNQ14191 1432 aaPredicted RBP eCLIP29.22■■■□□ 2.27
RUNX1-209ENST00000460207 PBRM1Q86U86 1689 aa29.19■■■□□ 2.26
RUNX1-209ENST00000460207 ABCA5Q8WWZ7 1642 aa29.19■■■□□ 2.26
RUNX1-209ENST00000460207 TRHP20396 242 aaPredicted RBP29.14■■■□□ 2.26
RUNX1-209ENST00000460207 TOP2BQ02880 1626 aa29.11■■■□□ 2.25
RUNX1-209ENST00000460207 BIVM-ERCC5R4GMW8 1640 aa29.08■■■□□ 2.25
RUNX1-209ENST00000460207 GRIN2AQ12879 1464 aa29.03■■■□□ 2.24
RUNX1-209ENST00000460207 FHAD1B1AJZ9 1412 aa28.97■■■□□ 2.23
RUNX1-209ENST00000460207 NUP160Q12769 1436 aa28.95■■■□□ 2.23
RUNX1-209ENST00000460207 ADAMTS12P58397 1594 aa28.94■■■□□ 2.22
RUNX1-209ENST00000460207 ERICH3Q5RHP9 1530 aa28.94■■■□□ 2.22
RUNX1-209ENST00000460207 CEP170Q5SW79 1584 aa28.86■■■□□ 2.21
RUNX1-209ENST00000460207 ERCC6L2Q5T890 1561 aa28.79■■■□□ 2.2
RUNX1-209ENST00000460207 SHROOM2Q13796 1616 aa28.78■■■□□ 2.2
RUNX1-209ENST00000460207 JPH4Q96JJ6 628 aa28.73■■■□□ 2.19
RUNX1-209ENST00000460207 PRG4Q92954 1404 aaPredicted RBP28.67■■■□□ 2.18
RUNX1-209ENST00000460207 IGF1RP08069 1367 aa28.62■■■□□ 2.17
RUNX1-209ENST00000460207 KIF27Q86VH2 1401 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms