RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 NISCHQ9Y2I1 1504 aa54.49■■■■■ 6.31
PDE6B-203ENST00000460119 ABCC9O60706 1549 aa49.32■■■■■ 5.49
PDE6B-203ENST00000460119 CCDC180Q9P1Z9 1646 aa48.68■■■■■ 5.38
PDE6B-203ENST00000460119 DNAJC5BQ9UF47 199 aa46.66■■■■■ 5.06
PDE6B-203ENST00000460119 RB1CC1Q8TDY2 1594 aa46.6■■■■■ 5.05
PDE6B-203ENST00000460119 DCAF8L2P0C7V8 631 aa46.47■■■■■ 5.03
PDE6B-203ENST00000460119 NACADO15069 1562 aa46.23■■■■■ 4.99
PDE6B-203ENST00000460119 PABPN1Q86U42 306 aaKnown RBP eCLIP46.08■■■■■ 4.97
PDE6B-203ENST00000460119 MYO15BQ96JP2 1530 aa45.47■■■■■ 4.87
PDE6B-203ENST00000460119 UNC13AQ9UPW8 1703 aa45.4■■■■■ 4.86
PDE6B-203ENST00000460119 BICRAQ9NZM4 1560 aa45.33■■■■■ 4.85
PDE6B-203ENST00000460119 ZCCHC6Q5VYS8 1495 aaKnown RBP45.06■■■■■ 4.8
PDE6B-203ENST00000460119 DCAF1Q9Y4B6 1507 aa44.85■■■■■ 4.77
PDE6B-203ENST00000460119 SCRIBQ14160 1630 aa44.61■■■■■ 4.73
PDE6B-203ENST00000460119 SHROOM4Q9ULL8 1493 aa44.48■■■■■ 4.71
PDE6B-203ENST00000460119 CECR2Q9BXF3 1484 aa44.39■■■■■ 4.7
PDE6B-203ENST00000460119 CC2D2AQ9P2K1 1620 aa44.36■■■■■ 4.69
PDE6B-203ENST00000460119 EIF4G1Q04637 1599 aaKnown RBP44.21■■■■■ 4.67
PDE6B-203ENST00000460119 DNAJC5Q9H3Z4 198 aa42.86■■■■■ 4.45
PDE6B-203ENST00000460119 NCAPD3P42695 1498 aa42.81■■■■■ 4.44
PDE6B-203ENST00000460119 ATAD2BQ9ULI0 1458 aa42.68■■■■■ 4.42
PDE6B-203ENST00000460119 ERCC6Q03468 1493 aa42.5■■■■■ 4.39
PDE6B-203ENST00000460119 SMARCA4P51532 1647 aa42.45■■■■■ 4.39
PDE6B-203ENST00000460119 SMARCA2P51531 1590 aa42.4■■■■■ 4.38
PDE6B-203ENST00000460119 CUX2O14529 1486 aa42.37■■■■■ 4.37
PDE6B-203ENST00000460119 NESP48681 1621 aa42.31■■■■■ 4.36
PDE6B-203ENST00000460119 HMGXB3Q12766 1538 aa42.31■■■■■ 4.36
PDE6B-203ENST00000460119 BAZ1AQ9NRL2 1556 aaPredicted RBP42.22■■■■■ 4.35
PDE6B-203ENST00000460119 BAZ1BQ9UIG0 1483 aaKnown RBP42.21■■■■■ 4.35
PDE6B-203ENST00000460119 MROH2BQ7Z745 1585 aa42.05■■■■■ 4.32
PDE6B-203ENST00000460119 PEG3Q9GZU2 1588 aa41.98■■■■■ 4.31
PDE6B-203ENST00000460119 LAMC3Q9Y6N6 1575 aa41.72■■■■■ 4.27
PDE6B-203ENST00000460119 THOC2Q8NI27 1593 aaKnown RBP41.67■■■■■ 4.26
PDE6B-203ENST00000460119 PDS5BQ9NTI5 1447 aa41.64■■■■■ 4.26
PDE6B-203ENST00000460119 CADPSQ9ULU8 1353 aa41.58■■■■■ 4.25
PDE6B-203ENST00000460119 KIF21AQ7Z4S6 1674 aa41.49■■■■■ 4.23
PDE6B-203ENST00000460119 WIZO95785 1651 aa41.46■■■■■ 4.23
PDE6B-203ENST00000460119 MRC2Q9UBG0 1479 aa41.27■■■■■ 4.2
PDE6B-203ENST00000460119 RSF1Q96T23 1441 aaPredicted RBP41.16■■■■■ 4.18
PDE6B-203ENST00000460119 WDR62O43379 1518 aa41.1■■■■■ 4.17
PDE6B-203ENST00000460119 FANCD2Q9BXW9 1451 aa41.06■■■■■ 4.16
PDE6B-203ENST00000460119 CEP164Q9UPV0 1460 aa41.05■■■■■ 4.16
PDE6B-203ENST00000460119 TRIM41Q8WV44 630 aa41■■■■■ 4.15
PDE6B-203ENST00000460119 CFTRP13569 1480 aa40.99■■■■■ 4.15
PDE6B-203ENST00000460119 TOP2AP11388 1531 aaKnown RBP40.88■■■■■ 4.13
PDE6B-203ENST00000460119 URB2Q14146 1524 aaKnown RBP40.74■■■■■ 4.11
PDE6B-203ENST00000460119 OSCARQ8IYS5 282 aa40.67■■■■■ 4.1
PDE6B-203ENST00000460119 CCDC88BA6NC98 1476 aa40.58■■■■■ 4.09
PDE6B-203ENST00000460119 ZNF608Q9ULD9 1512 aaPredicted RBP40.34■■■■■ 4.05
PDE6B-203ENST00000460119 IFT140Q96RY7 1462 aa40.26■■■■■ 4.03
PDE6B-203ENST00000460119 TOPBP1Q92547 1522 aa40.24■■■■■ 4.03
PDE6B-203ENST00000460119 PRDM2Q13029 1718 aa40.15■■■■■ 4.02
PDE6B-203ENST00000460119 ABCC8Q09428 1581 aa40.03■■■■■ 4
PDE6B-203ENST00000460119 AQRO60306 1485 aaKnown RBP eCLIP40■■■■□ 3.99
PDE6B-203ENST00000460119 DNMBPQ6XZF7 1577 aa39.97■■■■□ 3.99
PDE6B-203ENST00000460119 RIMBP3CA6NJZ7 1639 aa39.93■■■■□ 3.98
PDE6B-203ENST00000460119 RIMBP3BA6NNM3 1639 aa39.93■■■■□ 3.98
PDE6B-203ENST00000460119 RIMBP3Q9UFD9 1639 aa39.93■■■■□ 3.98
PDE6B-203ENST00000460119 EIF4G3O43432 1585 aaKnown RBP39.89■■■■□ 3.98
PDE6B-203ENST00000460119 FBLN2P98095 1184 aa39.88■■■■□ 3.97
PDE6B-203ENST00000460119 ARHGEF11O15085 1522 aa39.84■■■■□ 3.97
PDE6B-203ENST00000460119 POLA1P09884 1462 aaPredicted RBP39.82■■■■□ 3.97
PDE6B-203ENST00000460119 CYB5RLQ6IPT4 315 aa39.82■■■■□ 3.97
PDE6B-203ENST00000460119 RAD54L2Q9Y4B4 1467 aa39.81■■■■□ 3.96
PDE6B-203ENST00000460119 TARBP1Q13395 1621 aaKnown RBP39.8■■■■□ 3.96
PDE6B-203ENST00000460119 TDRD9Q8NDG6 1382 aaKnown RBP39.77■■■■□ 3.96
PDE6B-203ENST00000460119 SOGA1O94964 1423 aa39.74■■■■□ 3.95
PDE6B-203ENST00000460119 CHD1O14646 1710 aa39.57■■■■□ 3.93
PDE6B-203ENST00000460119 FGD5Q6ZNL6 1462 aa39.56■■■■□ 3.92
PDE6B-203ENST00000460119 CUX1P39880 1505 aa39.49■■■■□ 3.91
PDE6B-203ENST00000460119 CHMP7Q8WUX9 453 aaPredicted RBP39.48■■■■□ 3.91
PDE6B-203ENST00000460119 ARAP1Q96P48 1450 aa39.48■■■■□ 3.91
PDE6B-203ENST00000460119 SNAPC4Q5SXM2 1469 aa39.46■■■■□ 3.91
PDE6B-203ENST00000460119 SUPT5HO00267 1087 aaKnown RBP39.44■■■■□ 3.9
PDE6B-203ENST00000460119 TRHP20396 242 aaPredicted RBP39.43■■■■□ 3.9
PDE6B-203ENST00000460119 GRIN2BQ13224 1484 aa39.3■■■■□ 3.88
PDE6B-203ENST00000460119 MAGI1Q96QZ7 1491 aaPredicted RBP39.25■■■■□ 3.87
PDE6B-203ENST00000460119 CLASP1Q7Z460 1538 aa39.2■■■■□ 3.87
PDE6B-203ENST00000460119 WDR97A6NE52 1622 aa39.19■■■■□ 3.86
PDE6B-203ENST00000460119 SYNJ2O15056 1496 aa39.17■■■■□ 3.86
PDE6B-203ENST00000460119 GAPVD1Q14C86 1478 aa39.17■■■■□ 3.86
PDE6B-203ENST00000460119 SYNJ1O43426 1573 aa39.13■■■■□ 3.85
PDE6B-203ENST00000460119 ABCA10Q8WWZ4 1543 aa39.04■■■■□ 3.84
PDE6B-203ENST00000460119 PBRM1Q86U86 1689 aa38.91■■■■□ 3.82
PDE6B-203ENST00000460119 WRNQ14191 1432 aaPredicted RBP eCLIP38.91■■■■□ 3.82
PDE6B-203ENST00000460119 ABCA5Q8WWZ7 1642 aa38.89■■■■□ 3.82
PDE6B-203ENST00000460119 GRIN2AQ12879 1464 aa38.79■■■■□ 3.8
PDE6B-203ENST00000460119 ERCC6L2Q5T890 1561 aa38.74■■■■□ 3.79
PDE6B-203ENST00000460119 TOP2BQ02880 1626 aa38.67■■■■□ 3.78
PDE6B-203ENST00000460119 NUP160Q12769 1436 aa38.67■■■■□ 3.78
PDE6B-203ENST00000460119 FHAD1B1AJZ9 1412 aa38.66■■■■□ 3.78
PDE6B-203ENST00000460119 ADAMTS12P58397 1594 aa38.64■■■■□ 3.78
PDE6B-203ENST00000460119 CEP170Q5SW79 1584 aa38.64■■■■□ 3.78
PDE6B-203ENST00000460119 BIVM-ERCC5R4GMW8 1640 aa38.61■■■■□ 3.77
PDE6B-203ENST00000460119 ERICH3Q5RHP9 1530 aa38.48■■■■□ 3.75
PDE6B-203ENST00000460119 JPH4Q96JJ6 628 aa38.47■■■■□ 3.75
PDE6B-203ENST00000460119 PRG4Q92954 1404 aaPredicted RBP38.43■■■■□ 3.74
PDE6B-203ENST00000460119 SHROOM2Q13796 1616 aa38.38■■■■□ 3.74
PDE6B-203ENST00000460119 AEBP2Q6ZN18 517 aaPredicted RBP38.37■■■■□ 3.73
PDE6B-203ENST00000460119 IGF1RP08069 1367 aa38.2■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms