RNA–Protein interactions for RNA: ENST00000460096.1

LPIN1-211, Transcript of lipin 1, humanhuman

TSL 1 (best)

Gene LPIN1, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-211ENST00000460096 NISCHQ9Y2I1 1504 aa20.87■□□□□ 0.93
LPIN1-211ENST00000460096 CCDC180Q9P1Z9 1646 aa18.55■□□□□ 0.56
LPIN1-211ENST00000460096 ABCC9O60706 1549 aa17.7■□□□□ 0.42
LPIN1-211ENST00000460096 ZCCHC6Q5VYS8 1495 aaKnown RBP17.46■□□□□ 0.39
LPIN1-211ENST00000460096 DCAF1Q9Y4B6 1507 aa17.33■□□□□ 0.37
LPIN1-211ENST00000460096 NACADO15069 1562 aa17.31■□□□□ 0.36
LPIN1-211ENST00000460096 MYO15BQ96JP2 1530 aa17.3■□□□□ 0.36
LPIN1-211ENST00000460096 RB1CC1Q8TDY2 1594 aa17.28■□□□□ 0.36
LPIN1-211ENST00000460096 DCAF8L2P0C7V8 631 aa17.23■□□□□ 0.35
LPIN1-211ENST00000460096 UNC13AQ9UPW8 1703 aa16.87■□□□□ 0.29
LPIN1-211ENST00000460096 SCRIBQ14160 1630 aa16.86■□□□□ 0.29
LPIN1-211ENST00000460096 SHROOM4Q9ULL8 1493 aa16.63■□□□□ 0.25
LPIN1-211ENST00000460096 BICRAQ9NZM4 1560 aa16.63■□□□□ 0.25
LPIN1-211ENST00000460096 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
LPIN1-211ENST00000460096 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
LPIN1-211ENST00000460096 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.19
LPIN1-211ENST00000460096 SMARCA4P51532 1647 aa16.17■□□□□ 0.18
LPIN1-211ENST00000460096 DNAJC5BQ9UF47 199 aa16.16■□□□□ 0.18
LPIN1-211ENST00000460096 CECR2Q9BXF3 1484 aa16.14■□□□□ 0.17
LPIN1-211ENST00000460096 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.16
LPIN1-211ENST00000460096 MROH2BQ7Z745 1585 aa16.05■□□□□ 0.16
LPIN1-211ENST00000460096 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
LPIN1-211ENST00000460096 PEG3Q9GZU2 1588 aa16■□□□□ 0.15
LPIN1-211ENST00000460096 RSF1Q96T23 1441 aaPredicted RBP15.96■□□□□ 0.15
LPIN1-211ENST00000460096 ATAD2BQ9ULI0 1458 aa15.94■□□□□ 0.14
LPIN1-211ENST00000460096 HMGXB3Q12766 1538 aa15.93■□□□□ 0.14
LPIN1-211ENST00000460096 WIZO95785 1651 aa15.92■□□□□ 0.14
LPIN1-211ENST00000460096 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
LPIN1-211ENST00000460096 BAZ1BQ9UIG0 1483 aaKnown RBP15.89■□□□□ 0.13
LPIN1-211ENST00000460096 TOP2AP11388 1531 aaKnown RBP15.83■□□□□ 0.12
LPIN1-211ENST00000460096 SUPT5HO00267 1087 aaKnown RBP15.76■□□□□ 0.11
LPIN1-211ENST00000460096 CCDC88BA6NC98 1476 aa15.55■□□□□ 0.08
LPIN1-211ENST00000460096 LAMC3Q9Y6N6 1575 aa15.51■□□□□ 0.07
LPIN1-211ENST00000460096 PRDM2Q13029 1718 aa15.51■□□□□ 0.07
LPIN1-211ENST00000460096 CADPSQ9ULU8 1353 aa15.44■□□□□ 0.06
LPIN1-211ENST00000460096 CFTRP13569 1480 aa15.42■□□□□ 0.06
LPIN1-211ENST00000460096 DNAJC5Q9H3Z4 198 aa15.42■□□□□ 0.06
LPIN1-211ENST00000460096 NESP48681 1621 aa15.37■□□□□ 0.05
LPIN1-211ENST00000460096 PDS5BQ9NTI5 1447 aa15.36■□□□□ 0.05
LPIN1-211ENST00000460096 ERCC6Q03468 1493 aa15.32■□□□□ 0.04
LPIN1-211ENST00000460096 KIF21AQ7Z4S6 1674 aa15.32■□□□□ 0.04
LPIN1-211ENST00000460096 FANCD2Q9BXW9 1451 aa15.29■□□□□ 0.04
LPIN1-211ENST00000460096 CEP164Q9UPV0 1460 aa15.29■□□□□ 0.04
LPIN1-211ENST00000460096 MRC2Q9UBG0 1479 aa15.19■□□□□ 0.02
LPIN1-211ENST00000460096 THOC2Q8NI27 1593 aaKnown RBP15.18■□□□□ 0.02
LPIN1-211ENST00000460096 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
LPIN1-211ENST00000460096 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
LPIN1-211ENST00000460096 WDR62O43379 1518 aa15.13■□□□□ 0.01
LPIN1-211ENST00000460096 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
LPIN1-211ENST00000460096 URB2Q14146 1524 aaKnown RBP15.09■□□□□ 0.01
LPIN1-211ENST00000460096 BIVM-ERCC5R4GMW8 1640 aa15.09■□□□□ 0.01
LPIN1-211ENST00000460096 TOPBP1Q92547 1522 aa15.08■□□□□ 0.01
LPIN1-211ENST00000460096 TOP2BQ02880 1626 aa15.07■□□□□ 0
LPIN1-211ENST00000460096 CUX1P39880 1505 aa15.07■□□□□ 0
LPIN1-211ENST00000460096 SYNJ1O43426 1573 aa15.04■□□□□ -0
LPIN1-211ENST00000460096 CUX2O14529 1486 aa15.04■□□□□ -0
LPIN1-211ENST00000460096 FGD5Q6ZNL6 1462 aa14.98□□□□□ -0.01
LPIN1-211ENST00000460096 POLA1P09884 1462 aaPredicted RBP14.96□□□□□ -0.01
LPIN1-211ENST00000460096 IFT140Q96RY7 1462 aa14.94□□□□□ -0.02
LPIN1-211ENST00000460096 WDR97A6NE52 1622 aa14.92□□□□□ -0.02
LPIN1-211ENST00000460096 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
LPIN1-211ENST00000460096 TARBP1Q13395 1621 aaKnown RBP14.9□□□□□ -0.02
LPIN1-211ENST00000460096 SOGA1O94964 1423 aa14.89□□□□□ -0.03
LPIN1-211ENST00000460096 ABCA10Q8WWZ4 1543 aa14.87□□□□□ -0.03
LPIN1-211ENST00000460096 CHIC1Q5VXU3 224 aa14.86□□□□□ -0.03
LPIN1-211ENST00000460096 RAD54L2Q9Y4B4 1467 aa14.84□□□□□ -0.03
LPIN1-211ENST00000460096 EIF4G3O43432 1585 aaKnown RBP14.82□□□□□ -0.04
LPIN1-211ENST00000460096 ABCA5Q8WWZ7 1642 aa14.81□□□□□ -0.04
LPIN1-211ENST00000460096 PBRM1Q86U86 1689 aa14.79□□□□□ -0.04
LPIN1-211ENST00000460096 KIF27Q86VH2 1401 aa14.78□□□□□ -0.04
LPIN1-211ENST00000460096 ZNF608Q9ULD9 1512 aaPredicted RBP14.76□□□□□ -0.05
LPIN1-211ENST00000460096 GAPVD1Q14C86 1478 aa14.76□□□□□ -0.05
LPIN1-211ENST00000460096 EEA1Q15075 1411 aa14.75□□□□□ -0.05
LPIN1-211ENST00000460096 GRIN2BQ13224 1484 aa14.73□□□□□ -0.05
LPIN1-211ENST00000460096 TDRD9Q8NDG6 1382 aaKnown RBP14.73□□□□□ -0.05
LPIN1-211ENST00000460096 ERICH3Q5RHP9 1530 aa14.72□□□□□ -0.05
LPIN1-211ENST00000460096 CUL7Q14999 1698 aa14.71□□□□□ -0.05
LPIN1-211ENST00000460096 AQRO60306 1485 aaKnown RBP eCLIP14.71□□□□□ -0.055e-13■■■■□ 24
LPIN1-211ENST00000460096 MAGI1Q96QZ7 1491 aaPredicted RBP14.69□□□□□ -0.06
LPIN1-211ENST00000460096 ADAMTS12P58397 1594 aa14.66□□□□□ -0.06
LPIN1-211ENST00000460096 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
LPIN1-211ENST00000460096 RUSC2Q8N2Y8 1516 aa14.61□□□□□ -0.07
LPIN1-211ENST00000460096 FHAD1B1AJZ9 1412 aa14.6□□□□□ -0.07
LPIN1-211ENST00000460096 SYNJ2O15056 1496 aa14.6□□□□□ -0.07
LPIN1-211ENST00000460096 CHD1O14646 1710 aa14.6□□□□□ -0.07
LPIN1-211ENST00000460096 IGF1RP08069 1367 aa14.58□□□□□ -0.08
LPIN1-211ENST00000460096 KIF21BO75037 1637 aa14.57□□□□□ -0.08
LPIN1-211ENST00000460096 CSRNP3Q8WYN3 585 aa14.55□□□□□ -0.08
LPIN1-211ENST00000460096 CARMIL1Q5VZK9 1371 aa14.55□□□□□ -0.08
LPIN1-211ENST00000460096 RAPGEF2Q9Y4G8 1499 aa14.55□□□□□ -0.08
LPIN1-211ENST00000460096 FAM9AQ8IZU1 332 aaPredicted RBP14.54□□□□□ -0.08
LPIN1-211ENST00000460096 GRIN2AQ12879 1464 aa14.53□□□□□ -0.08
LPIN1-211ENST00000460096 PRXQ9BXM0 1461 aa14.52□□□□□ -0.08
LPIN1-211ENST00000460096 CHMP7Q8WUX9 453 aaPredicted RBP14.52□□□□□ -0.09
LPIN1-211ENST00000460096 FBLN2P98095 1184 aa14.5□□□□□ -0.09
LPIN1-211ENST00000460096 CTTNBP2Q8WZ74 1663 aa14.49□□□□□ -0.09
LPIN1-211ENST00000460096 GOLGA3Q08378 1498 aa14.49□□□□□ -0.09
LPIN1-211ENST00000460096 CEP170Q5SW79 1584 aa14.43□□□□□ -0.1
LPIN1-211ENST00000460096 NUP160Q12769 1436 aa14.43□□□□□ -0.1
LPIN1-211ENST00000460096 IQGAP2Q13576 1575 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms