RNA–Protein interactions for RNA: ENST00000460039.5

TMCO3-203, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 864 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-203ENST00000460039 NISCHQ9Y2I1 1504 aa39.53■■■■□ 3.92
TMCO3-203ENST00000460039 CCDC180Q9P1Z9 1646 aa35.29■■■■□ 3.24
TMCO3-203ENST00000460039 ABCC9O60706 1549 aa34.81■■■■□ 3.16
TMCO3-203ENST00000460039 RB1CC1Q8TDY2 1594 aa33.37■■■□□ 2.93
TMCO3-203ENST00000460039 NACADO15069 1562 aa33.26■■■□□ 2.92
TMCO3-203ENST00000460039 DCAF8L2P0C7V8 631 aa33.08■■■□□ 2.89
TMCO3-203ENST00000460039 MYO15BQ96JP2 1530 aa32.99■■■□□ 2.87
TMCO3-203ENST00000460039 ZCCHC6Q5VYS8 1495 aaKnown RBP32.86■■■□□ 2.85
TMCO3-203ENST00000460039 DCAF1Q9Y4B6 1507 aa32.72■■■□□ 2.83
TMCO3-203ENST00000460039 UNC13AQ9UPW8 1703 aa32.6■■■□□ 2.81
TMCO3-203ENST00000460039 PABPN1Q86U42 306 aaKnown RBP eCLIP32.46■■■□□ 2.79
TMCO3-203ENST00000460039 BICRAQ9NZM4 1560 aa32.38■■■□□ 2.77
TMCO3-203ENST00000460039 DNAJC5BQ9UF47 199 aa32.28■■■□□ 2.76
TMCO3-203ENST00000460039 SCRIBQ14160 1630 aa32.12■■■□□ 2.73
TMCO3-203ENST00000460039 SHROOM4Q9ULL8 1493 aa32.04■■■□□ 2.72
TMCO3-203ENST00000460039 EIF4G1Q04637 1599 aaKnown RBP31.55■■■□□ 2.64
TMCO3-203ENST00000460039 CC2D2AQ9P2K1 1620 aa31.49■■■□□ 2.63
TMCO3-203ENST00000460039 CECR2Q9BXF3 1484 aa31.33■■■□□ 2.61
TMCO3-203ENST00000460039 SMARCA4P51532 1647 aa30.73■■■□□ 2.51
TMCO3-203ENST00000460039 NCAPD3P42695 1498 aa30.71■■■□□ 2.51
TMCO3-203ENST00000460039 ATAD2BQ9ULI0 1458 aa30.65■■■□□ 2.5
TMCO3-203ENST00000460039 BAZ1AQ9NRL2 1556 aaPredicted RBP30.65■■■□□ 2.5
TMCO3-203ENST00000460039 SMARCA2P51531 1590 aa30.6■■■□□ 2.49
TMCO3-203ENST00000460039 HMGXB3Q12766 1538 aa30.52■■■□□ 2.48
TMCO3-203ENST00000460039 PEG3Q9GZU2 1588 aa30.47■■■□□ 2.47
TMCO3-203ENST00000460039 MROH2BQ7Z745 1585 aa30.44■■■□□ 2.46
TMCO3-203ENST00000460039 BAZ1BQ9UIG0 1483 aaKnown RBP30.37■■■□□ 2.45
TMCO3-203ENST00000460039 WIZO95785 1651 aa30.08■■■□□ 2.41
TMCO3-203ENST00000460039 NESP48681 1621 aa30.03■■■□□ 2.4
TMCO3-203ENST00000460039 ERCC6Q03468 1493 aa30.02■■■□□ 2.4
TMCO3-203ENST00000460039 RSF1Q96T23 1441 aaPredicted RBP29.98■■■□□ 2.39
TMCO3-203ENST00000460039 LAMC3Q9Y6N6 1575 aa29.94■■■□□ 2.38
TMCO3-203ENST00000460039 CUX2O14529 1486 aa29.87■■■□□ 2.37
TMCO3-203ENST00000460039 CADPSQ9ULU8 1353 aa29.78■■■□□ 2.36
TMCO3-203ENST00000460039 TOP2AP11388 1531 aaKnown RBP29.76■■■□□ 2.36
TMCO3-203ENST00000460039 PDS5BQ9NTI5 1447 aa29.74■■■□□ 2.35
TMCO3-203ENST00000460039 THOC2Q8NI27 1593 aaKnown RBP29.66■■■□□ 2.34
TMCO3-203ENST00000460039 KIF21AQ7Z4S6 1674 aa29.66■■■□□ 2.34
TMCO3-203ENST00000460039 CFTRP13569 1480 aa29.55■■■□□ 2.32
TMCO3-203ENST00000460039 MRC2Q9UBG0 1479 aa29.45■■■□□ 2.31
TMCO3-203ENST00000460039 FANCD2Q9BXW9 1451 aa29.42■■■□□ 2.3
TMCO3-203ENST00000460039 CEP164Q9UPV0 1460 aa29.42■■■□□ 2.3
TMCO3-203ENST00000460039 CCDC88BA6NC98 1476 aa29.41■■■□□ 2.3
TMCO3-203ENST00000460039 WDR62O43379 1518 aa29.37■■■□□ 2.29
TMCO3-203ENST00000460039 DNAJC5Q9H3Z4 198 aa29.35■■■□□ 2.29
TMCO3-203ENST00000460039 SUPT5HO00267 1087 aaKnown RBP29.27■■■□□ 2.28
TMCO3-203ENST00000460039 PRDM2Q13029 1718 aa29.27■■■□□ 2.28
TMCO3-203ENST00000460039 URB2Q14146 1524 aaKnown RBP29.15■■■□□ 2.26
TMCO3-203ENST00000460039 TOPBP1Q92547 1522 aa28.92■■■□□ 2.22
TMCO3-203ENST00000460039 ABCC8Q09428 1581 aa28.92■■■□□ 2.22
TMCO3-203ENST00000460039 DNMBPQ6XZF7 1577 aa28.86■■■□□ 2.21
TMCO3-203ENST00000460039 IFT140Q96RY7 1462 aa28.83■■■□□ 2.21
TMCO3-203ENST00000460039 ZNF608Q9ULD9 1512 aaPredicted RBP28.71■■■□□ 2.19
TMCO3-203ENST00000460039 POLA1P09884 1462 aaPredicted RBP28.66■■■□□ 2.18
TMCO3-203ENST00000460039 TARBP1Q13395 1621 aaKnown RBP28.64■■■□□ 2.18
TMCO3-203ENST00000460039 CUX1P39880 1505 aa28.58■■■□□ 2.17
TMCO3-203ENST00000460039 EIF4G3O43432 1585 aaKnown RBP28.58■■■□□ 2.17
TMCO3-203ENST00000460039 OSCARQ8IYS5 282 aa28.56■■■□□ 2.16
TMCO3-203ENST00000460039 FGD5Q6ZNL6 1462 aa28.53■■■□□ 2.16
TMCO3-203ENST00000460039 SOGA1O94964 1423 aa28.52■■■□□ 2.16
TMCO3-203ENST00000460039 RAD54L2Q9Y4B4 1467 aa28.52■■■□□ 2.16
TMCO3-203ENST00000460039 AQRO60306 1485 aaKnown RBP eCLIP28.51■■■□□ 2.15
TMCO3-203ENST00000460039 WDR97A6NE52 1622 aa28.41■■■□□ 2.14
TMCO3-203ENST00000460039 TDRD9Q8NDG6 1382 aaKnown RBP28.4■■■□□ 2.14
TMCO3-203ENST00000460039 CHD1O14646 1710 aa28.27■■■□□ 2.12
TMCO3-203ENST00000460039 WRNQ14191 1432 aaPredicted RBP eCLIP28.26■■■□□ 2.12
TMCO3-203ENST00000460039 ABCA10Q8WWZ4 1543 aa28.26■■■□□ 2.11
TMCO3-203ENST00000460039 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
TMCO3-203ENST00000460039 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
TMCO3-203ENST00000460039 GRIN2BQ13224 1484 aa28.24■■■□□ 2.11
TMCO3-203ENST00000460039 SNAPC4Q5SXM2 1469 aa28.23■■■□□ 2.11
TMCO3-203ENST00000460039 MAGI1Q96QZ7 1491 aaPredicted RBP28.21■■■□□ 2.11
TMCO3-203ENST00000460039 SYNJ1O43426 1573 aa28.21■■■□□ 2.11
TMCO3-203ENST00000460039 FBLN2P98095 1184 aa28.19■■■□□ 2.1
TMCO3-203ENST00000460039 GAPVD1Q14C86 1478 aa28.19■■■□□ 2.1
TMCO3-203ENST00000460039 TRIM41Q8WV44 630 aa28.16■■■□□ 2.1
TMCO3-203ENST00000460039 ABCA5Q8WWZ7 1642 aa28.16■■■□□ 2.1
TMCO3-203ENST00000460039 PBRM1Q86U86 1689 aa28.13■■■□□ 2.09
TMCO3-203ENST00000460039 RIMBP3CA6NJZ7 1639 aa28.13■■■□□ 2.09
TMCO3-203ENST00000460039 RIMBP3BA6NNM3 1639 aa28.13■■■□□ 2.09
TMCO3-203ENST00000460039 RIMBP3Q9UFD9 1639 aa28.13■■■□□ 2.09
TMCO3-203ENST00000460039 SYNJ2O15056 1496 aa28.1■■■□□ 2.09
TMCO3-203ENST00000460039 ARHGEF11O15085 1522 aa28.09■■■□□ 2.09
TMCO3-203ENST00000460039 CHMP7Q8WUX9 453 aaPredicted RBP28.09■■■□□ 2.09
TMCO3-203ENST00000460039 CLASP1Q7Z460 1538 aa27.99■■■□□ 2.07
TMCO3-203ENST00000460039 ADAMTS12P58397 1594 aa27.91■■■□□ 2.06
TMCO3-203ENST00000460039 ERICH3Q5RHP9 1530 aa27.91■■■□□ 2.06
TMCO3-203ENST00000460039 GRIN2AQ12879 1464 aa27.88■■■□□ 2.05
TMCO3-203ENST00000460039 FHAD1B1AJZ9 1412 aa27.86■■■□□ 2.05
TMCO3-203ENST00000460039 ARAP1Q96P48 1450 aa27.85■■■□□ 2.05
TMCO3-203ENST00000460039 CYB5RLQ6IPT4 315 aa27.83■■■□□ 2.05
TMCO3-203ENST00000460039 NUP160Q12769 1436 aa27.78■■■□□ 2.04
TMCO3-203ENST00000460039 CEP170Q5SW79 1584 aa27.74■■■□□ 2.03
TMCO3-203ENST00000460039 KIF27Q86VH2 1401 aa27.71■■■□□ 2.03
TMCO3-203ENST00000460039 IGF1RP08069 1367 aa27.65■■■□□ 2.02
TMCO3-203ENST00000460039 SHROOM2Q13796 1616 aa27.61■■■□□ 2.01
TMCO3-203ENST00000460039 CUL7Q14999 1698 aa27.58■■■□□ 2.01
TMCO3-203ENST00000460039 ERCC6L2Q5T890 1561 aa27.56■■■□□ 2
TMCO3-203ENST00000460039 RUSC2Q8N2Y8 1516 aa27.51■■□□□ 1.99
TMCO3-203ENST00000460039 JPH4Q96JJ6 628 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms