RNA–Protein interactions for RNA: ENST00000460007.1

SVIL-204, Transcript of supervillin, humanhuman

TSL 3

Gene SVIL, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-204ENST00000460007 NISCHQ9Y2I1 1504 aa45.69■■■■■ 4.9
SVIL-204ENST00000460007 CCDC180Q9P1Z9 1646 aa40.57■■■■■ 4.09
SVIL-204ENST00000460007 ABCC9O60706 1549 aa39.71■■■■□ 3.95
SVIL-204ENST00000460007 DCAF8L2P0C7V8 631 aa38.23■■■■□ 3.71
SVIL-204ENST00000460007 RB1CC1Q8TDY2 1594 aa38.21■■■■□ 3.71
SVIL-204ENST00000460007 NACADO15069 1562 aa38.17■■■■□ 3.7
SVIL-204ENST00000460007 ZCCHC6Q5VYS8 1495 aaKnown RBP38.07■■■■□ 3.68
SVIL-204ENST00000460007 MYO15BQ96JP2 1530 aa37.94■■■■□ 3.66
SVIL-204ENST00000460007 DCAF1Q9Y4B6 1507 aa37.8■■■■□ 3.64
SVIL-204ENST00000460007 UNC13AQ9UPW8 1703 aa37.26■■■■□ 3.56
SVIL-204ENST00000460007 PABPN1Q86U42 306 aaKnown RBP eCLIP37.14■■■■□ 3.54
SVIL-204ENST00000460007 SCRIBQ14160 1630 aa37.07■■■■□ 3.52
SVIL-204ENST00000460007 BICRAQ9NZM4 1560 aa37.01■■■■□ 3.52
SVIL-204ENST00000460007 SHROOM4Q9ULL8 1493 aa36.67■■■■□ 3.46
SVIL-204ENST00000460007 DNAJC5BQ9UF47 199 aa36.39■■■■□ 3.42
SVIL-204ENST00000460007 EIF4G1Q04637 1599 aaKnown RBP36.06■■■■□ 3.36
SVIL-204ENST00000460007 CC2D2AQ9P2K1 1620 aa35.9■■■■□ 3.34
SVIL-204ENST00000460007 CECR2Q9BXF3 1484 aa35.68■■■■□ 3.3
SVIL-204ENST00000460007 SMARCA4P51532 1647 aa35.43■■■■□ 3.26
SVIL-204ENST00000460007 BAZ1AQ9NRL2 1556 aaPredicted RBP35.42■■■■□ 3.26
SVIL-204ENST00000460007 ATAD2BQ9ULI0 1458 aa35.25■■■■□ 3.23
SVIL-204ENST00000460007 NCAPD3P42695 1498 aa35.22■■■■□ 3.23
SVIL-204ENST00000460007 SMARCA2P51531 1590 aa35.22■■■■□ 3.23
SVIL-204ENST00000460007 MROH2BQ7Z745 1585 aa35.21■■■■□ 3.23
SVIL-204ENST00000460007 PEG3Q9GZU2 1588 aa35.08■■■■□ 3.21
SVIL-204ENST00000460007 HMGXB3Q12766 1538 aa35.05■■■■□ 3.2
SVIL-204ENST00000460007 BAZ1BQ9UIG0 1483 aaKnown RBP34.98■■■■□ 3.19
SVIL-204ENST00000460007 RSF1Q96T23 1441 aaPredicted RBP34.84■■■■□ 3.17
SVIL-204ENST00000460007 WIZO95785 1651 aa34.82■■■■□ 3.16
SVIL-204ENST00000460007 TOP2AP11388 1531 aaKnown RBP34.48■■■■□ 3.11
SVIL-204ENST00000460007 NESP48681 1621 aa34.36■■■■□ 3.09
SVIL-204ENST00000460007 LAMC3Q9Y6N6 1575 aa34.28■■■■□ 3.08
SVIL-204ENST00000460007 ERCC6Q03468 1493 aa34.27■■■■□ 3.08
SVIL-204ENST00000460007 CADPSQ9ULU8 1353 aa34.22■■■■□ 3.07
SVIL-204ENST00000460007 PDS5BQ9NTI5 1447 aa34.09■■■■□ 3.05
SVIL-204ENST00000460007 CCDC88BA6NC98 1476 aa34.07■■■■□ 3.05
SVIL-204ENST00000460007 SUPT5HO00267 1087 aaKnown RBP34.04■■■■□ 3.04
SVIL-204ENST00000460007 CFTRP13569 1480 aa34.01■■■■□ 3.03
SVIL-204ENST00000460007 KIF21AQ7Z4S6 1674 aa33.92■■■■□ 3.02
SVIL-204ENST00000460007 CUX2O14529 1486 aa33.85■■■■□ 3.01
SVIL-204ENST00000460007 FANCD2Q9BXW9 1451 aa33.82■■■■□ 3.01
SVIL-204ENST00000460007 THOC2Q8NI27 1593 aaKnown RBP33.81■■■■□ 3
SVIL-204ENST00000460007 CEP164Q9UPV0 1460 aa33.79■■■■□ 3
SVIL-204ENST00000460007 MRC2Q9UBG0 1479 aa33.72■■■□□ 2.99
SVIL-204ENST00000460007 PRDM2Q13029 1718 aa33.69■■■□□ 2.98
SVIL-204ENST00000460007 WDR62O43379 1518 aa33.59■■■□□ 2.97
SVIL-204ENST00000460007 URB2Q14146 1524 aaKnown RBP33.47■■■□□ 2.95
SVIL-204ENST00000460007 ABCC8Q09428 1581 aa33.29■■■□□ 2.92
SVIL-204ENST00000460007 TOPBP1Q92547 1522 aa33.28■■■□□ 2.92
SVIL-204ENST00000460007 DNMBPQ6XZF7 1577 aa33.24■■■□□ 2.91
SVIL-204ENST00000460007 IFT140Q96RY7 1462 aa33.07■■■□□ 2.88
SVIL-204ENST00000460007 CUX1P39880 1505 aa33.04■■■□□ 2.88
SVIL-204ENST00000460007 POLA1P09884 1462 aaPredicted RBP33■■■□□ 2.87
SVIL-204ENST00000460007 FGD5Q6ZNL6 1462 aa32.93■■■□□ 2.86
SVIL-204ENST00000460007 ZNF608Q9ULD9 1512 aaPredicted RBP32.91■■■□□ 2.86
SVIL-204ENST00000460007 TARBP1Q13395 1621 aaKnown RBP32.88■■■□□ 2.85
SVIL-204ENST00000460007 SOGA1O94964 1423 aa32.88■■■□□ 2.85
SVIL-204ENST00000460007 RAD54L2Q9Y4B4 1467 aa32.86■■■□□ 2.85
SVIL-204ENST00000460007 WRNQ14191 1432 aaPredicted RBP eCLIP32.86■■■□□ 2.85
SVIL-204ENST00000460007 EIF4G3O43432 1585 aaKnown RBP32.77■■■□□ 2.84
SVIL-204ENST00000460007 DNAJC5Q9H3Z4 198 aa32.76■■■□□ 2.83
SVIL-204ENST00000460007 TOP2BQ02880 1626 aa32.76■■■□□ 2.83
SVIL-204ENST00000460007 SYNJ1O43426 1573 aa32.75■■■□□ 2.83
SVIL-204ENST00000460007 AQRO60306 1485 aaKnown RBP eCLIP32.74■■■□□ 2.83
SVIL-204ENST00000460007 BIVM-ERCC5R4GMW8 1640 aa32.73■■■□□ 2.83
SVIL-204ENST00000460007 TDRD9Q8NDG6 1382 aaKnown RBP32.7■■■□□ 2.82
SVIL-204ENST00000460007 WDR97A6NE52 1622 aa32.64■■■□□ 2.82
SVIL-204ENST00000460007 ABCA10Q8WWZ4 1543 aa32.61■■■□□ 2.81
SVIL-204ENST00000460007 GAPVD1Q14C86 1478 aa32.5■■■□□ 2.79
SVIL-204ENST00000460007 GRIN2BQ13224 1484 aa32.49■■■□□ 2.79
SVIL-204ENST00000460007 OSCARQ8IYS5 282 aa32.48■■■□□ 2.79
SVIL-204ENST00000460007 ABCA5Q8WWZ7 1642 aa32.45■■■□□ 2.79
SVIL-204ENST00000460007 SNAPC4Q5SXM2 1469 aa32.44■■■□□ 2.78
SVIL-204ENST00000460007 MAGI1Q96QZ7 1491 aaPredicted RBP32.4■■■□□ 2.78
SVIL-204ENST00000460007 FBLN2P98095 1184 aa32.38■■■□□ 2.77
SVIL-204ENST00000460007 PBRM1Q86U86 1689 aa32.37■■■□□ 2.77
SVIL-204ENST00000460007 CHD1O14646 1710 aa32.32■■■□□ 2.76
SVIL-204ENST00000460007 CHMP7Q8WUX9 453 aaPredicted RBP32.29■■■□□ 2.76
SVIL-204ENST00000460007 SYNJ2O15056 1496 aa32.27■■■□□ 2.76
SVIL-204ENST00000460007 ERICH3Q5RHP9 1530 aa32.21■■■□□ 2.75
SVIL-204ENST00000460007 KIF27Q86VH2 1401 aa32.19■■■□□ 2.74
SVIL-204ENST00000460007 ADAMTS12P58397 1594 aa32.16■■■□□ 2.74
SVIL-204ENST00000460007 TRIM41Q8WV44 630 aa32.15■■■□□ 2.74
SVIL-204ENST00000460007 FHAD1B1AJZ9 1412 aa32.13■■■□□ 2.73
SVIL-204ENST00000460007 GRIN2AQ12879 1464 aa32.07■■■□□ 2.72
SVIL-204ENST00000460007 IGF1RP08069 1367 aa32.03■■■□□ 2.72
SVIL-204ENST00000460007 CLASP1Q7Z460 1538 aa31.99■■■□□ 2.71
SVIL-204ENST00000460007 ARHGEF11O15085 1522 aa31.93■■■□□ 2.7
SVIL-204ENST00000460007 CUL7Q14999 1698 aa31.92■■■□□ 2.7
SVIL-204ENST00000460007 NUP160Q12769 1436 aa31.92■■■□□ 2.7
SVIL-204ENST00000460007 RIMBP3CA6NJZ7 1639 aa31.9■■■□□ 2.7
SVIL-204ENST00000460007 RIMBP3BA6NNM3 1639 aa31.9■■■□□ 2.7
SVIL-204ENST00000460007 RIMBP3Q9UFD9 1639 aa31.9■■■□□ 2.7
SVIL-204ENST00000460007 CEP170Q5SW79 1584 aa31.89■■■□□ 2.7
SVIL-204ENST00000460007 RUSC2Q8N2Y8 1516 aa31.86■■■□□ 2.69
SVIL-204ENST00000460007 CARMIL1Q5VZK9 1371 aa31.86■■■□□ 2.69
SVIL-204ENST00000460007 CHIC1Q5VXU3 224 aa31.75■■■□□ 2.67
SVIL-204ENST00000460007 ARAP1Q96P48 1450 aa31.67■■■□□ 2.66
SVIL-204ENST00000460007 RAPGEF2Q9Y4G8 1499 aa31.67■■■□□ 2.66
SVIL-204ENST00000460007 CYB5RLQ6IPT4 315 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms