RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 NISCHQ9Y2I1 1504 aa35.47■■■■□ 3.27
PCOLCE-202ENST00000460002 ABCC9O60706 1549 aa33.52■■■□□ 2.96
PCOLCE-202ENST00000460002 DNAJC5BQ9UF47 199 aa32.57■■■□□ 2.8
PCOLCE-202ENST00000460002 CCDC180Q9P1Z9 1646 aa32.27■■■□□ 2.76
PCOLCE-202ENST00000460002 RB1CC1Q8TDY2 1594 aa31.31■■■□□ 2.6
PCOLCE-202ENST00000460002 PABPN1Q86U42 306 aaKnown RBP eCLIP31.05■■■□□ 2.56
PCOLCE-202ENST00000460002 NACADO15069 1562 aa30.82■■■□□ 2.52
PCOLCE-202ENST00000460002 DNAJC5Q9H3Z4 198 aa30.7■■■□□ 2.51
PCOLCE-202ENST00000460002 UNC13AQ9UPW8 1703 aa30.58■■■□□ 2.49
PCOLCE-202ENST00000460002 BICRAQ9NZM4 1560 aa30.52■■■□□ 2.48
PCOLCE-202ENST00000460002 DCAF8L2P0C7V8 631 aa30.45■■■□□ 2.47
PCOLCE-202ENST00000460002 CECR2Q9BXF3 1484 aa30.3■■■□□ 2.44
PCOLCE-202ENST00000460002 CC2D2AQ9P2K1 1620 aa30.18■■■□□ 2.42
PCOLCE-202ENST00000460002 MYO15BQ96JP2 1530 aa30.01■■■□□ 2.39
PCOLCE-202ENST00000460002 SHROOM4Q9ULL8 1493 aa29.9■■■□□ 2.38
PCOLCE-202ENST00000460002 EIF4G1Q04637 1599 aaKnown RBP29.84■■■□□ 2.37
PCOLCE-202ENST00000460002 SCRIBQ14160 1630 aa29.39■■■□□ 2.3
PCOLCE-202ENST00000460002 CUX2O14529 1486 aa29.32■■■□□ 2.28
PCOLCE-202ENST00000460002 DCAF1Q9Y4B6 1507 aa29.2■■■□□ 2.27
PCOLCE-202ENST00000460002 ZCCHC6Q5VYS8 1495 aaKnown RBP29.16■■■□□ 2.26
PCOLCE-202ENST00000460002 ERCC6Q03468 1493 aa28.97■■■□□ 2.23
PCOLCE-202ENST00000460002 TRIM41Q8WV44 630 aa28.86■■■□□ 2.21
PCOLCE-202ENST00000460002 NCAPD3P42695 1498 aa28.52■■■□□ 2.16
PCOLCE-202ENST00000460002 NESP48681 1621 aa28.48■■■□□ 2.15
PCOLCE-202ENST00000460002 THOC2Q8NI27 1593 aaKnown RBP28.38■■■□□ 2.13
PCOLCE-202ENST00000460002 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
PCOLCE-202ENST00000460002 HMGXB3Q12766 1538 aa28.16■■■□□ 2.1
PCOLCE-202ENST00000460002 SMARCA2P51531 1590 aa28.13■■■□□ 2.09
PCOLCE-202ENST00000460002 LAMC3Q9Y6N6 1575 aa28.01■■■□□ 2.07
PCOLCE-202ENST00000460002 KIF21AQ7Z4S6 1674 aa27.99■■■□□ 2.07
PCOLCE-202ENST00000460002 SMARCA4P51532 1647 aa27.9■■■□□ 2.06
PCOLCE-202ENST00000460002 PDS5BQ9NTI5 1447 aa27.9■■■□□ 2.06
PCOLCE-202ENST00000460002 BAZ1BQ9UIG0 1483 aaKnown RBP27.89■■■□□ 2.06
PCOLCE-202ENST00000460002 BAZ1AQ9NRL2 1556 aaPredicted RBP27.86■■■□□ 2.05
PCOLCE-202ENST00000460002 OSCARQ8IYS5 282 aa27.8■■■□□ 2.04
PCOLCE-202ENST00000460002 MRC2Q9UBG0 1479 aa27.75■■■□□ 2.03
PCOLCE-202ENST00000460002 WDR62O43379 1518 aa27.72■■■□□ 2.03
PCOLCE-202ENST00000460002 PEG3Q9GZU2 1588 aa27.65■■■□□ 2.02
PCOLCE-202ENST00000460002 CADPSQ9ULU8 1353 aa27.59■■■□□ 2.01
PCOLCE-202ENST00000460002 RIMBP3CA6NJZ7 1639 aa27.57■■■□□ 2
PCOLCE-202ENST00000460002 RIMBP3BA6NNM3 1639 aa27.57■■■□□ 2
PCOLCE-202ENST00000460002 RIMBP3Q9UFD9 1639 aa27.57■■■□□ 2
PCOLCE-202ENST00000460002 CEP164Q9UPV0 1460 aa27.39■■□□□ 1.98
PCOLCE-202ENST00000460002 ARHGEF11O15085 1522 aa27.38■■□□□ 1.97
PCOLCE-202ENST00000460002 MROH2BQ7Z745 1585 aa27.35■■□□□ 1.97
PCOLCE-202ENST00000460002 AEBP2Q6ZN18 517 aaPredicted RBP27.35■■□□□ 1.97
PCOLCE-202ENST00000460002 TRHP20396 242 aaPredicted RBP27.31■■□□□ 1.96
PCOLCE-202ENST00000460002 FANCD2Q9BXW9 1451 aa27.27■■□□□ 1.96
PCOLCE-202ENST00000460002 CYB5RLQ6IPT4 315 aa27.26■■□□□ 1.95
PCOLCE-202ENST00000460002 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
PCOLCE-202ENST00000460002 ARAP1Q96P48 1450 aa27.06■■□□□ 1.92
PCOLCE-202ENST00000460002 CFTRP13569 1480 aa27.03■■□□□ 1.92
PCOLCE-202ENST00000460002 ZNF608Q9ULD9 1512 aaPredicted RBP27.02■■□□□ 1.92
PCOLCE-202ENST00000460002 WIZO95785 1651 aa26.93■■□□□ 1.9
PCOLCE-202ENST00000460002 IFT140Q96RY7 1462 aa26.88■■□□□ 1.89
PCOLCE-202ENST00000460002 RSF1Q96T23 1441 aaPredicted RBP26.8■■□□□ 1.88
PCOLCE-202ENST00000460002 EIF4G3O43432 1585 aaKnown RBP26.75■■□□□ 1.87
PCOLCE-202ENST00000460002 CHD1O14646 1710 aa26.75■■□□□ 1.87
PCOLCE-202ENST00000460002 FBLN2P98095 1184 aa26.65■■□□□ 1.86
PCOLCE-202ENST00000460002 TOPBP1Q92547 1522 aa26.63■■□□□ 1.85
PCOLCE-202ENST00000460002 AQRO60306 1485 aaKnown RBP eCLIP26.62■■□□□ 1.858e-7■■■□□ 16.1
PCOLCE-202ENST00000460002 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
PCOLCE-202ENST00000460002 TOP2AP11388 1531 aaKnown RBP26.5■■□□□ 1.83
PCOLCE-202ENST00000460002 TARBP1Q13395 1621 aaKnown RBP26.47■■□□□ 1.83
PCOLCE-202ENST00000460002 CLASP1Q7Z460 1538 aa26.47■■□□□ 1.83
PCOLCE-202ENST00000460002 ILDR1Q86SU0 546 aaPredicted RBP26.44■■□□□ 1.82
PCOLCE-202ENST00000460002 ABCC8Q09428 1581 aa26.42■■□□□ 1.82
PCOLCE-202ENST00000460002 DNMBPQ6XZF7 1577 aa26.39■■□□□ 1.82
PCOLCE-202ENST00000460002 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
PCOLCE-202ENST00000460002 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
PCOLCE-202ENST00000460002 POLA1P09884 1462 aaPredicted RBP26.29■■□□□ 1.8
PCOLCE-202ENST00000460002 GAPVD1Q14C86 1478 aa26.28■■□□□ 1.8
PCOLCE-202ENST00000460002 TDRD9Q8NDG6 1382 aaKnown RBP26.27■■□□□ 1.8
PCOLCE-202ENST00000460002 CCDC88BA6NC98 1476 aa26.24■■□□□ 1.79
PCOLCE-202ENST00000460002 RAD54L2Q9Y4B4 1467 aa26.24■■□□□ 1.79
PCOLCE-202ENST00000460002 CHMP7Q8WUX9 453 aaPredicted RBP26.24■■□□□ 1.79
PCOLCE-202ENST00000460002 SOGA1O94964 1423 aa26.14■■□□□ 1.77
PCOLCE-202ENST00000460002 MAGI1Q96QZ7 1491 aaPredicted RBP26.13■■□□□ 1.77
PCOLCE-202ENST00000460002 SYNJ2O15056 1496 aa26.09■■□□□ 1.77
PCOLCE-202ENST00000460002 WDR97A6NE52 1622 aa26.05■■□□□ 1.76
PCOLCE-202ENST00000460002 GRIN2BQ13224 1484 aa26.04■■□□□ 1.76
PCOLCE-202ENST00000460002 KDM4FA0A1W2PPD8 638 aa26.03■■□□□ 1.76
PCOLCE-202ENST00000460002 ERCC6L2Q5T890 1561 aa26.01■■□□□ 1.75
PCOLCE-202ENST00000460002 KIF13AQ9H1H9 1805 aa25.96■■□□□ 1.75
PCOLCE-202ENST00000460002 FGD5Q6ZNL6 1462 aa25.95■■□□□ 1.74
PCOLCE-202ENST00000460002 CEP170Q5SW79 1584 aa25.81■■□□□ 1.72
PCOLCE-202ENST00000460002 PBRM1Q86U86 1689 aa25.8■■□□□ 1.72
PCOLCE-202ENST00000460002 CUX1P39880 1505 aa25.76■■□□□ 1.71
PCOLCE-202ENST00000460002 FAM69CQ0P6D2 419 aa25.75■■□□□ 1.71
PCOLCE-202ENST00000460002 ABCC10Q5T3U5 1492 aa25.72■■□□□ 1.71
PCOLCE-202ENST00000460002 GRIN2AQ12879 1464 aa25.71■■□□□ 1.71
PCOLCE-202ENST00000460002 NUP160Q12769 1436 aa25.69■■□□□ 1.7
PCOLCE-202ENST00000460002 KDM6BO15054 1643 aa25.67■■□□□ 1.7
PCOLCE-202ENST00000460002 SHROOM2Q13796 1616 aa25.67■■□□□ 1.7
PCOLCE-202ENST00000460002 ABCA5Q8WWZ7 1642 aa25.64■■□□□ 1.7
PCOLCE-202ENST00000460002 DIP2BQ9P265 1576 aa25.61■■□□□ 1.69
PCOLCE-202ENST00000460002 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.68
PCOLCE-202ENST00000460002 MAPKBP1O60336 1514 aa25.56■■□□□ 1.68
PCOLCE-202ENST00000460002 ADAMTS12P58397 1594 aa25.53■■□□□ 1.68
PCOLCE-202ENST00000460002 PRG4Q92954 1404 aaPredicted RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms