RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 NISCHQ9Y2I1 1504 aa25.02■■□□□ 1.6
SYN3-205ENST00000459990 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
SYN3-205ENST00000459990 ABCC9O60706 1549 aa22.47■■□□□ 1.19
SYN3-205ENST00000459990 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
SYN3-205ENST00000459990 NACADO15069 1562 aa21.22■□□□□ 0.99
SYN3-205ENST00000459990 UNC13AQ9UPW8 1703 aa21.09■□□□□ 0.97
SYN3-205ENST00000459990 DNAJC5BQ9UF47 199 aa21.08■□□□□ 0.97
SYN3-205ENST00000459990 MYO15BQ96JP2 1530 aa20.92■□□□□ 0.94
SYN3-205ENST00000459990 DCAF8L2P0C7V8 631 aa20.91■□□□□ 0.94
SYN3-205ENST00000459990 BICRAQ9NZM4 1560 aa20.87■□□□□ 0.93
SYN3-205ENST00000459990 PABPN1Q86U42 306 aaKnown RBP eCLIP20.84■□□□□ 0.93
SYN3-205ENST00000459990 ZCCHC6Q5VYS8 1495 aaKnown RBP20.78■□□□□ 0.92
SYN3-205ENST00000459990 DCAF1Q9Y4B6 1507 aa20.66■□□□□ 0.9
SYN3-205ENST00000459990 SCRIBQ14160 1630 aa20.53■□□□□ 0.88
SYN3-205ENST00000459990 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
SYN3-205ENST00000459990 CC2D2AQ9P2K1 1620 aa20.35■□□□□ 0.85
SYN3-205ENST00000459990 EIF4G1Q04637 1599 aaKnown RBP20.3■□□□□ 0.84
SYN3-205ENST00000459990 CECR2Q9BXF3 1484 aa20.22■□□□□ 0.83
SYN3-205ENST00000459990 SMARCA4P51532 1647 aa19.58■□□□□ 0.72
SYN3-205ENST00000459990 NCAPD3P42695 1498 aa19.56■□□□□ 0.72
SYN3-205ENST00000459990 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
SYN3-205ENST00000459990 HMGXB3Q12766 1538 aa19.49■□□□□ 0.71
SYN3-205ENST00000459990 SMARCA2P51531 1590 aa19.46■□□□□ 0.71
SYN3-205ENST00000459990 BAZ1AQ9NRL2 1556 aaPredicted RBP19.41■□□□□ 0.7
SYN3-205ENST00000459990 PEG3Q9GZU2 1588 aa19.37■□□□□ 0.69
SYN3-205ENST00000459990 NESP48681 1621 aa19.35■□□□□ 0.69
SYN3-205ENST00000459990 CUX2O14529 1486 aa19.35■□□□□ 0.69
SYN3-205ENST00000459990 ERCC6Q03468 1493 aa19.34■□□□□ 0.69
SYN3-205ENST00000459990 MROH2BQ7Z745 1585 aa19.32■□□□□ 0.68
SYN3-205ENST00000459990 BAZ1BQ9UIG0 1483 aaKnown RBP19.32■□□□□ 0.68
SYN3-205ENST00000459990 DNAJC5Q9H3Z4 198 aa19.27■□□□□ 0.68
SYN3-205ENST00000459990 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
SYN3-205ENST00000459990 LAMC3Q9Y6N6 1575 aa19.17■□□□□ 0.66
SYN3-205ENST00000459990 KIF21AQ7Z4S6 1674 aa19.17■□□□□ 0.66
SYN3-205ENST00000459990 WIZO95785 1651 aa19.12■□□□□ 0.65
SYN3-205ENST00000459990 PDS5BQ9NTI5 1447 aa18.95■□□□□ 0.62
SYN3-205ENST00000459990 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
SYN3-205ENST00000459990 WDR62O43379 1518 aa18.9■□□□□ 0.62
SYN3-205ENST00000459990 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
SYN3-205ENST00000459990 RSF1Q96T23 1441 aaPredicted RBP18.85■□□□□ 0.61
SYN3-205ENST00000459990 TOP2AP11388 1531 aaKnown RBP18.83■□□□□ 0.6
SYN3-205ENST00000459990 CEP164Q9UPV0 1460 aa18.79■□□□□ 0.6
SYN3-205ENST00000459990 CFTRP13569 1480 aa18.77■□□□□ 0.59
SYN3-205ENST00000459990 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.59
SYN3-205ENST00000459990 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
SYN3-205ENST00000459990 URB2Q14146 1524 aaKnown RBP18.68■□□□□ 0.58
SYN3-205ENST00000459990 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.56
SYN3-205ENST00000459990 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
SYN3-205ENST00000459990 ZNF608Q9ULD9 1512 aaPredicted RBP18.44■□□□□ 0.54
SYN3-205ENST00000459990 TRIM41Q8WV44 630 aa18.41■□□□□ 0.54
SYN3-205ENST00000459990 IFT140Q96RY7 1462 aa18.39■□□□□ 0.54
SYN3-205ENST00000459990 EIF4G3O43432 1585 aaKnown RBP18.39■□□□□ 0.53
SYN3-205ENST00000459990 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
SYN3-205ENST00000459990 TARBP1Q13395 1621 aaKnown RBP18.34■□□□□ 0.53
SYN3-205ENST00000459990 OSCARQ8IYS5 282 aa18.32■□□□□ 0.52
SYN3-205ENST00000459990 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
SYN3-205ENST00000459990 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
SYN3-205ENST00000459990 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
SYN3-205ENST00000459990 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
SYN3-205ENST00000459990 CHD1O14646 1710 aa18.29■□□□□ 0.52
SYN3-205ENST00000459990 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
SYN3-205ENST00000459990 ARHGEF11O15085 1522 aa18.22■□□□□ 0.51
SYN3-205ENST00000459990 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.51
SYN3-205ENST00000459990 RAD54L2Q9Y4B4 1467 aa18.18■□□□□ 0.5
SYN3-205ENST00000459990 CUX1P39880 1505 aa18.15■□□□□ 0.5
SYN3-205ENST00000459990 WDR97A6NE52 1622 aa18.14■□□□□ 0.49
SYN3-205ENST00000459990 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.49
SYN3-205ENST00000459990 SOGA1O94964 1423 aa18.07■□□□□ 0.48
SYN3-205ENST00000459990 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
SYN3-205ENST00000459990 TDRD9Q8NDG6 1382 aaKnown RBP18.06■□□□□ 0.48
SYN3-205ENST00000459990 ARAP1Q96P48 1450 aa18.05■□□□□ 0.48
SYN3-205ENST00000459990 PBRM1Q86U86 1689 aa18.05■□□□□ 0.48
SYN3-205ENST00000459990 CLASP1Q7Z460 1538 aa18.03■□□□□ 0.48
SYN3-205ENST00000459990 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
SYN3-205ENST00000459990 MAGI1Q96QZ7 1491 aaPredicted RBP17.98■□□□□ 0.47
SYN3-205ENST00000459990 FBLN2P98095 1184 aa17.96■□□□□ 0.47
SYN3-205ENST00000459990 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
SYN3-205ENST00000459990 SYNJ1O43426 1573 aa17.95■□□□□ 0.46
SYN3-205ENST00000459990 CYB5RLQ6IPT4 315 aa17.93■□□□□ 0.46
SYN3-205ENST00000459990 SYNJ2O15056 1496 aa17.92■□□□□ 0.46
SYN3-205ENST00000459990 ABCA10Q8WWZ4 1543 aa17.92■□□□□ 0.46
SYN3-205ENST00000459990 GAPVD1Q14C86 1478 aa17.9■□□□□ 0.46
SYN3-205ENST00000459990 BIVM-ERCC5R4GMW8 1640 aa17.9■□□□□ 0.46
SYN3-205ENST00000459990 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
SYN3-205ENST00000459990 TOP2BQ02880 1626 aa17.85■□□□□ 0.45
SYN3-205ENST00000459990 ADAMTS12P58397 1594 aa17.83■□□□□ 0.45
SYN3-205ENST00000459990 CHMP7Q8WUX9 453 aaPredicted RBP17.82■□□□□ 0.44
SYN3-205ENST00000459990 CEP170Q5SW79 1584 aa17.79■□□□□ 0.44
SYN3-205ENST00000459990 ERCC6L2Q5T890 1561 aa17.79■□□□□ 0.44
SYN3-205ENST00000459990 GRIN2AQ12879 1464 aa17.77■□□□□ 0.44
SYN3-205ENST00000459990 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
SYN3-205ENST00000459990 SHROOM2Q13796 1616 aa17.72■□□□□ 0.43
SYN3-205ENST00000459990 NUP160Q12769 1436 aa17.72■□□□□ 0.43
SYN3-205ENST00000459990 TRHP20396 242 aaPredicted RBP17.69■□□□□ 0.42
SYN3-205ENST00000459990 ERICH3Q5RHP9 1530 aa17.68■□□□□ 0.42
SYN3-205ENST00000459990 FHAD1B1AJZ9 1412 aa17.65■□□□□ 0.42
SYN3-205ENST00000459990 RUSC2Q8N2Y8 1516 aa17.6■□□□□ 0.41
SYN3-205ENST00000459990 KIF13AQ9H1H9 1805 aa17.53■□□□□ 0.4
SYN3-205ENST00000459990 PRG4Q92954 1404 aaPredicted RBP17.48■□□□□ 0.39
SYN3-205ENST00000459990 CUL7Q14999 1698 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms