RNA–Protein interactions for RNA: ENST00000459960.1

MYH9-204, Transcript of myosin heavy chain 9, humanhuman

TSL 2

Gene MYH9, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYH9-204ENST00000459960 NISCHQ9Y2I1 1504 aa25.68■■□□□ 1.7
MYH9-204ENST00000459960 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
MYH9-204ENST00000459960 ABCC9O60706 1549 aa22.22■■□□□ 1.15
MYH9-204ENST00000459960 RB1CC1Q8TDY2 1594 aa21.53■■□□□ 1.04
MYH9-204ENST00000459960 NACADO15069 1562 aa21.53■■□□□ 1.04
MYH9-204ENST00000459960 MYO15BQ96JP2 1530 aa21.43■■□□□ 1.02
MYH9-204ENST00000459960 DCAF8L2P0C7V8 631 aa21.4■■□□□ 1.02
MYH9-204ENST00000459960 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.02
MYH9-204ENST00000459960 DCAF1Q9Y4B6 1507 aa21.34■■□□□ 1.01
MYH9-204ENST00000459960 UNC13AQ9UPW8 1703 aa21.02■□□□□ 0.96
MYH9-204ENST00000459960 SCRIBQ14160 1630 aa20.78■□□□□ 0.92
MYH9-204ENST00000459960 BICRAQ9NZM4 1560 aa20.77■□□□□ 0.92
MYH9-204ENST00000459960 PABPN1Q86U42 306 aaKnown RBP eCLIP20.73■□□□□ 0.91
MYH9-204ENST00000459960 SHROOM4Q9ULL8 1493 aa20.72■□□□□ 0.91
MYH9-204ENST00000459960 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.84
MYH9-204ENST00000459960 EIF4G1Q04637 1599 aaKnown RBP20.26■□□□□ 0.83
MYH9-204ENST00000459960 CC2D2AQ9P2K1 1620 aa20.16■□□□□ 0.82
MYH9-204ENST00000459960 CECR2Q9BXF3 1484 aa20■□□□□ 0.79
MYH9-204ENST00000459960 BAZ1AQ9NRL2 1556 aaPredicted RBP19.96■□□□□ 0.79
MYH9-204ENST00000459960 SMARCA4P51532 1647 aa19.94■□□□□ 0.78
MYH9-204ENST00000459960 SMARCA2P51531 1590 aa19.85■□□□□ 0.77
MYH9-204ENST00000459960 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
MYH9-204ENST00000459960 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
MYH9-204ENST00000459960 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
MYH9-204ENST00000459960 HMGXB3Q12766 1538 aa19.74■□□□□ 0.75
MYH9-204ENST00000459960 MROH2BQ7Z745 1585 aa19.74■□□□□ 0.75
MYH9-204ENST00000459960 BAZ1BQ9UIG0 1483 aaKnown RBP19.66■□□□□ 0.74
MYH9-204ENST00000459960 WIZO95785 1651 aa19.56■□□□□ 0.72
MYH9-204ENST00000459960 RSF1Q96T23 1441 aaPredicted RBP19.54■□□□□ 0.72
MYH9-204ENST00000459960 TOP2AP11388 1531 aaKnown RBP19.39■□□□□ 0.69
MYH9-204ENST00000459960 LAMC3Q9Y6N6 1575 aa19.34■□□□□ 0.69
MYH9-204ENST00000459960 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
MYH9-204ENST00000459960 CADPSQ9ULU8 1353 aa19.22■□□□□ 0.67
MYH9-204ENST00000459960 NESP48681 1621 aa19.22■□□□□ 0.67
MYH9-204ENST00000459960 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
MYH9-204ENST00000459960 CCDC88BA6NC98 1476 aa19.11■□□□□ 0.65
MYH9-204ENST00000459960 CFTRP13569 1480 aa19.11■□□□□ 0.65
MYH9-204ENST00000459960 PRDM2Q13029 1718 aa19.1■□□□□ 0.65
MYH9-204ENST00000459960 KIF21AQ7Z4S6 1674 aa19.09■□□□□ 0.65
MYH9-204ENST00000459960 CUX2O14529 1486 aa19.05■□□□□ 0.64
MYH9-204ENST00000459960 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
MYH9-204ENST00000459960 THOC2Q8NI27 1593 aaKnown RBP19■□□□□ 0.63
MYH9-204ENST00000459960 CEP164Q9UPV0 1460 aa18.99■□□□□ 0.63
MYH9-204ENST00000459960 FANCD2Q9BXW9 1451 aa18.98■□□□□ 0.63
MYH9-204ENST00000459960 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
MYH9-204ENST00000459960 WDR62O43379 1518 aa18.88■□□□□ 0.61
MYH9-204ENST00000459960 ABCC8Q09428 1581 aa18.81■□□□□ 0.6
MYH9-204ENST00000459960 URB2Q14146 1524 aaKnown RBP18.75■□□□□ 0.59
MYH9-204ENST00000459960 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
MYH9-204ENST00000459960 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
MYH9-204ENST00000459960 IFT140Q96RY7 1462 aa18.6■□□□□ 0.57
MYH9-204ENST00000459960 CUX1P39880 1505 aa18.53■□□□□ 0.56
MYH9-204ENST00000459960 POLA1P09884 1462 aaPredicted RBP18.51■□□□□ 0.55
MYH9-204ENST00000459960 TARBP1Q13395 1621 aaKnown RBP18.49■□□□□ 0.55
MYH9-204ENST00000459960 FGD5Q6ZNL6 1462 aa18.48■□□□□ 0.55
MYH9-204ENST00000459960 WDR97A6NE52 1622 aa18.48■□□□□ 0.55
MYH9-204ENST00000459960 SOGA1O94964 1423 aa18.47■□□□□ 0.55
MYH9-204ENST00000459960 WRNQ14191 1432 aaPredicted RBP eCLIP18.47■□□□□ 0.55
MYH9-204ENST00000459960 BIVM-ERCC5R4GMW8 1640 aa18.46■□□□□ 0.55
MYH9-204ENST00000459960 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
MYH9-204ENST00000459960 EIF4G3O43432 1585 aaKnown RBP18.41■□□□□ 0.54
MYH9-204ENST00000459960 ZNF608Q9ULD9 1512 aaPredicted RBP18.4■□□□□ 0.54
MYH9-204ENST00000459960 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.53
MYH9-204ENST00000459960 SYNJ1O43426 1573 aa18.37■□□□□ 0.53
MYH9-204ENST00000459960 DNAJC5Q9H3Z4 198 aa18.35■□□□□ 0.53
MYH9-204ENST00000459960 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.53
MYH9-204ENST00000459960 AQRO60306 1485 aaKnown RBP eCLIP18.32■□□□□ 0.521e-9■□□□□ 10.3
MYH9-204ENST00000459960 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
MYH9-204ENST00000459960 PBRM1Q86U86 1689 aa18.27■□□□□ 0.52
MYH9-204ENST00000459960 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
MYH9-204ENST00000459960 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
MYH9-204ENST00000459960 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
MYH9-204ENST00000459960 OSCARQ8IYS5 282 aa18.25■□□□□ 0.51
MYH9-204ENST00000459960 MAGI1Q96QZ7 1491 aaPredicted RBP18.24■□□□□ 0.51
MYH9-204ENST00000459960 CHD1O14646 1710 aa18.2■□□□□ 0.5
MYH9-204ENST00000459960 SNAPC4Q5SXM2 1469 aa18.19■□□□□ 0.5
MYH9-204ENST00000459960 ERICH3Q5RHP9 1530 aa18.16■□□□□ 0.5
MYH9-204ENST00000459960 SYNJ2O15056 1496 aa18.14■□□□□ 0.5
MYH9-204ENST00000459960 CHMP7Q8WUX9 453 aaPredicted RBP18.13■□□□□ 0.49
MYH9-204ENST00000459960 FBLN2P98095 1184 aa18.12■□□□□ 0.49
MYH9-204ENST00000459960 KIF27Q86VH2 1401 aa18.11■□□□□ 0.49
MYH9-204ENST00000459960 ADAMTS12P58397 1594 aa18.07■□□□□ 0.48
MYH9-204ENST00000459960 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
MYH9-204ENST00000459960 TRIM41Q8WV44 630 aa18.06■□□□□ 0.48
MYH9-204ENST00000459960 CUL7Q14999 1698 aa18.03■□□□□ 0.48
MYH9-204ENST00000459960 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
MYH9-204ENST00000459960 CLASP1Q7Z460 1538 aa17.97■□□□□ 0.47
MYH9-204ENST00000459960 IGF1RP08069 1367 aa17.96■□□□□ 0.47
MYH9-204ENST00000459960 NUP160Q12769 1436 aa17.92■□□□□ 0.46
MYH9-204ENST00000459960 RIMBP3CA6NJZ7 1639 aa17.92■□□□□ 0.46
MYH9-204ENST00000459960 RIMBP3BA6NNM3 1639 aa17.92■□□□□ 0.46
MYH9-204ENST00000459960 RIMBP3Q9UFD9 1639 aa17.92■□□□□ 0.46
MYH9-204ENST00000459960 ARHGEF11O15085 1522 aa17.91■□□□□ 0.46
MYH9-204ENST00000459960 CARMIL1Q5VZK9 1371 aa17.9■□□□□ 0.46
MYH9-204ENST00000459960 CEP170Q5SW79 1584 aa17.89■□□□□ 0.45
MYH9-204ENST00000459960 EEA1Q15075 1411 aa17.85■□□□□ 0.45
MYH9-204ENST00000459960 SHROOM2Q13796 1616 aa17.82■□□□□ 0.44
MYH9-204ENST00000459960 RUSC2Q8N2Y8 1516 aa17.82■□□□□ 0.44
MYH9-204ENST00000459960 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
MYH9-204ENST00000459960 CHIC1Q5VXU3 224 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms