RNA–Protein interactions for RNA: ENST00000459931.1

NCDN-206, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 1,041 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-206ENST00000459931 NISCHQ9Y2I1 1504 aa38.83■■■■□ 3.81
NCDN-206ENST00000459931 ABCC9O60706 1549 aa34.75■■■■□ 3.15
NCDN-206ENST00000459931 CCDC180Q9P1Z9 1646 aa34.7■■■■□ 3.14
NCDN-206ENST00000459931 RB1CC1Q8TDY2 1594 aa33.07■■■□□ 2.88
NCDN-206ENST00000459931 DCAF8L2P0C7V8 631 aa32.99■■■□□ 2.87
NCDN-206ENST00000459931 NACADO15069 1562 aa32.86■■■□□ 2.85
NCDN-206ENST00000459931 DNAJC5BQ9UF47 199 aa32.54■■■□□ 2.8
NCDN-206ENST00000459931 PABPN1Q86U42 306 aaKnown RBP eCLIP32.46■■■□□ 2.79
NCDN-206ENST00000459931 MYO15BQ96JP2 1530 aa32.41■■■□□ 2.78
NCDN-206ENST00000459931 UNC13AQ9UPW8 1703 aa32.21■■■□□ 2.75
NCDN-206ENST00000459931 ZCCHC6Q5VYS8 1495 aaKnown RBP32.16■■■□□ 2.74
NCDN-206ENST00000459931 BICRAQ9NZM4 1560 aa32.04■■■□□ 2.72
NCDN-206ENST00000459931 DCAF1Q9Y4B6 1507 aa32.04■■■□□ 2.72
NCDN-206ENST00000459931 SCRIBQ14160 1630 aa31.71■■■□□ 2.67
NCDN-206ENST00000459931 SHROOM4Q9ULL8 1493 aa31.62■■■□□ 2.65
NCDN-206ENST00000459931 CC2D2AQ9P2K1 1620 aa31.34■■■□□ 2.61
NCDN-206ENST00000459931 EIF4G1Q04637 1599 aaKnown RBP31.29■■■□□ 2.6
NCDN-206ENST00000459931 CECR2Q9BXF3 1484 aa31.28■■■□□ 2.6
NCDN-206ENST00000459931 NCAPD3P42695 1498 aa30.37■■■□□ 2.45
NCDN-206ENST00000459931 ATAD2BQ9ULI0 1458 aa30.29■■■□□ 2.44
NCDN-206ENST00000459931 SMARCA4P51532 1647 aa30.23■■■□□ 2.43
NCDN-206ENST00000459931 SMARCA2P51531 1590 aa30.19■■■□□ 2.42
NCDN-206ENST00000459931 BAZ1AQ9NRL2 1556 aaPredicted RBP30.13■■■□□ 2.41
NCDN-206ENST00000459931 HMGXB3Q12766 1538 aa30.09■■■□□ 2.41
NCDN-206ENST00000459931 ERCC6Q03468 1493 aa30.02■■■□□ 2.4
NCDN-206ENST00000459931 BAZ1BQ9UIG0 1483 aaKnown RBP30.02■■■□□ 2.4
NCDN-206ENST00000459931 MROH2BQ7Z745 1585 aa29.92■■■□□ 2.38
NCDN-206ENST00000459931 PEG3Q9GZU2 1588 aa29.91■■■□□ 2.38
NCDN-206ENST00000459931 CUX2O14529 1486 aa29.86■■■□□ 2.37
NCDN-206ENST00000459931 NESP48681 1621 aa29.85■■■□□ 2.37
NCDN-206ENST00000459931 DNAJC5Q9H3Z4 198 aa29.83■■■□□ 2.37
NCDN-206ENST00000459931 LAMC3Q9Y6N6 1575 aa29.63■■■□□ 2.33
NCDN-206ENST00000459931 WIZO95785 1651 aa29.55■■■□□ 2.32
NCDN-206ENST00000459931 PDS5BQ9NTI5 1447 aa29.54■■■□□ 2.32
NCDN-206ENST00000459931 CADPSQ9ULU8 1353 aa29.5■■■□□ 2.31
NCDN-206ENST00000459931 THOC2Q8NI27 1593 aaKnown RBP29.43■■■□□ 2.3
NCDN-206ENST00000459931 KIF21AQ7Z4S6 1674 aa29.39■■■□□ 2.3
NCDN-206ENST00000459931 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
NCDN-206ENST00000459931 MRC2Q9UBG0 1479 aa29.22■■■□□ 2.27
NCDN-206ENST00000459931 TOP2AP11388 1531 aaKnown RBP29.17■■■□□ 2.26
NCDN-206ENST00000459931 CEP164Q9UPV0 1460 aa29.14■■■□□ 2.26
NCDN-206ENST00000459931 CFTRP13569 1480 aa29.13■■■□□ 2.25
NCDN-206ENST00000459931 FANCD2Q9BXW9 1451 aa29.13■■■□□ 2.25
NCDN-206ENST00000459931 WDR62O43379 1518 aa29.1■■■□□ 2.25
NCDN-206ENST00000459931 CCDC88BA6NC98 1476 aa28.91■■■□□ 2.22
NCDN-206ENST00000459931 URB2Q14146 1524 aaKnown RBP28.84■■■□□ 2.21
NCDN-206ENST00000459931 PRDM2Q13029 1718 aa28.72■■■□□ 2.19
NCDN-206ENST00000459931 OSCARQ8IYS5 282 aa28.66■■■□□ 2.18
NCDN-206ENST00000459931 TRIM41Q8WV44 630 aa28.63■■■□□ 2.17
NCDN-206ENST00000459931 TOPBP1Q92547 1522 aa28.56■■■□□ 2.16
NCDN-206ENST00000459931 IFT140Q96RY7 1462 aa28.55■■■□□ 2.16
NCDN-206ENST00000459931 ABCC8Q09428 1581 aa28.54■■■□□ 2.16
NCDN-206ENST00000459931 ZNF608Q9ULD9 1512 aaPredicted RBP28.49■■■□□ 2.15
NCDN-206ENST00000459931 DNMBPQ6XZF7 1577 aa28.44■■■□□ 2.14
NCDN-206ENST00000459931 SUPT5HO00267 1087 aaKnown RBP28.31■■■□□ 2.12
NCDN-206ENST00000459931 AQRO60306 1485 aaKnown RBP eCLIP28.3■■■□□ 2.121e-6■■■■■ 32.9
NCDN-206ENST00000459931 EIF4G3O43432 1585 aaKnown RBP28.28■■■□□ 2.12
NCDN-206ENST00000459931 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
NCDN-206ENST00000459931 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
NCDN-206ENST00000459931 SOGA1O94964 1423 aa28.23■■■□□ 2.11
NCDN-206ENST00000459931 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
NCDN-206ENST00000459931 FBLN2P98095 1184 aa28.21■■■□□ 2.11
NCDN-206ENST00000459931 TDRD9Q8NDG6 1382 aaKnown RBP28.17■■■□□ 2.1
NCDN-206ENST00000459931 FGD5Q6ZNL6 1462 aa28.13■■■□□ 2.09
NCDN-206ENST00000459931 RIMBP3CA6NJZ7 1639 aa28.1■■■□□ 2.09
NCDN-206ENST00000459931 RIMBP3BA6NNM3 1639 aa28.1■■■□□ 2.09
NCDN-206ENST00000459931 RIMBP3Q9UFD9 1639 aa28.1■■■□□ 2.09
NCDN-206ENST00000459931 CUX1P39880 1505 aa28.1■■■□□ 2.09
NCDN-206ENST00000459931 ARHGEF11O15085 1522 aa28.06■■■□□ 2.08
NCDN-206ENST00000459931 CHD1O14646 1710 aa28.04■■■□□ 2.08
NCDN-206ENST00000459931 CYB5RLQ6IPT4 315 aa28■■■□□ 2.07
NCDN-206ENST00000459931 CHMP7Q8WUX9 453 aaPredicted RBP28■■■□□ 2.07
NCDN-206ENST00000459931 SNAPC4Q5SXM2 1469 aa27.96■■■□□ 2.07
NCDN-206ENST00000459931 WDR97A6NE52 1622 aa27.96■■■□□ 2.07
NCDN-206ENST00000459931 GRIN2BQ13224 1484 aa27.92■■■□□ 2.06
NCDN-206ENST00000459931 MAGI1Q96QZ7 1491 aaPredicted RBP27.89■■■□□ 2.05
NCDN-206ENST00000459931 GAPVD1Q14C86 1478 aa27.86■■■□□ 2.05
NCDN-206ENST00000459931 SYNJ2O15056 1496 aa27.81■■■□□ 2.04
NCDN-206ENST00000459931 ABCA10Q8WWZ4 1543 aa27.8■■■□□ 2.04
NCDN-206ENST00000459931 WRNQ14191 1432 aaPredicted RBP eCLIP27.79■■■□□ 2.04
NCDN-206ENST00000459931 ARAP1Q96P48 1450 aa27.78■■■□□ 2.04
NCDN-206ENST00000459931 SYNJ1O43426 1573 aa27.77■■■□□ 2.04
NCDN-206ENST00000459931 CLASP1Q7Z460 1538 aa27.73■■■□□ 2.03
NCDN-206ENST00000459931 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
NCDN-206ENST00000459931 TRHP20396 242 aaPredicted RBP27.69■■■□□ 2.02
NCDN-206ENST00000459931 ABCA5Q8WWZ7 1642 aa27.68■■■□□ 2.02
NCDN-206ENST00000459931 TOP2BQ02880 1626 aa27.67■■■□□ 2.02
NCDN-206ENST00000459931 BIVM-ERCC5R4GMW8 1640 aa27.62■■■□□ 2.01
NCDN-206ENST00000459931 GRIN2AQ12879 1464 aa27.55■■■□□ 2
NCDN-206ENST00000459931 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
NCDN-206ENST00000459931 ADAMTS12P58397 1594 aa27.48■■□□□ 1.99
NCDN-206ENST00000459931 ERICH3Q5RHP9 1530 aa27.45■■□□□ 1.98
NCDN-206ENST00000459931 NUP160Q12769 1436 aa27.43■■□□□ 1.98
NCDN-206ENST00000459931 CEP170Q5SW79 1584 aa27.4■■□□□ 1.98
NCDN-206ENST00000459931 ERCC6L2Q5T890 1561 aa27.33■■□□□ 1.97
NCDN-206ENST00000459931 JPH4Q96JJ6 628 aa27.3■■□□□ 1.96
NCDN-206ENST00000459931 SHROOM2Q13796 1616 aa27.24■■□□□ 1.95
NCDN-206ENST00000459931 PRG4Q92954 1404 aaPredicted RBP27.24■■□□□ 1.95
NCDN-206ENST00000459931 KIF27Q86VH2 1401 aa27.22■■□□□ 1.95
NCDN-206ENST00000459931 IGF1RP08069 1367 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms