RNA–Protein interactions for RNA: ENST00000459910.5

PSMD2-208, Transcript of proteasome 26S subunit, non-ATPase 2, humanhuman

TSL 5

Gene PSMD2, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD2-208ENST00000459910 NISCHQ9Y2I1 1504 aa55.31■■■■■ 6.44
PSMD2-208ENST00000459910 CCDC180Q9P1Z9 1646 aa49.49■■■■■ 5.51
PSMD2-208ENST00000459910 ABCC9O60706 1549 aa48.69■■■■■ 5.39
PSMD2-208ENST00000459910 RB1CC1Q8TDY2 1594 aa46.76■■■■■ 5.08
PSMD2-208ENST00000459910 NACADO15069 1562 aa46.56■■■■■ 5.04
PSMD2-208ENST00000459910 DCAF8L2P0C7V8 631 aa46.36■■■■■ 5.01
PSMD2-208ENST00000459910 MYO15BQ96JP2 1530 aa46.13■■■■■ 4.97
PSMD2-208ENST00000459910 ZCCHC6Q5VYS8 1495 aaKnown RBP46■■■■■ 4.95
PSMD2-208ENST00000459910 DCAF1Q9Y4B6 1507 aa45.77■■■■■ 4.92
PSMD2-208ENST00000459910 UNC13AQ9UPW8 1703 aa45.68■■■■■ 4.9
PSMD2-208ENST00000459910 PABPN1Q86U42 306 aaKnown RBP eCLIP45.34■■■■■ 4.85
PSMD2-208ENST00000459910 BICRAQ9NZM4 1560 aa45.24■■■■■ 4.83
PSMD2-208ENST00000459910 SCRIBQ14160 1630 aa45.06■■■■■ 4.8
PSMD2-208ENST00000459910 DNAJC5BQ9UF47 199 aa44.87■■■■■ 4.77
PSMD2-208ENST00000459910 SHROOM4Q9ULL8 1493 aa44.85■■■■■ 4.77
PSMD2-208ENST00000459910 EIF4G1Q04637 1599 aaKnown RBP44.14■■■■■ 4.66
PSMD2-208ENST00000459910 CC2D2AQ9P2K1 1620 aa44.06■■■■■ 4.64
PSMD2-208ENST00000459910 CECR2Q9BXF3 1484 aa43.82■■■■■ 4.6
PSMD2-208ENST00000459910 SMARCA4P51532 1647 aa43.06■■■■■ 4.48
PSMD2-208ENST00000459910 BAZ1AQ9NRL2 1556 aaPredicted RBP42.97■■■■■ 4.47
PSMD2-208ENST00000459910 NCAPD3P42695 1498 aa42.89■■■■■ 4.46
PSMD2-208ENST00000459910 SMARCA2P51531 1590 aa42.89■■■■■ 4.46
PSMD2-208ENST00000459910 ATAD2BQ9ULI0 1458 aa42.86■■■■■ 4.45
PSMD2-208ENST00000459910 HMGXB3Q12766 1538 aa42.73■■■■■ 4.43
PSMD2-208ENST00000459910 PEG3Q9GZU2 1588 aa42.62■■■■■ 4.41
PSMD2-208ENST00000459910 MROH2BQ7Z745 1585 aa42.58■■■■■ 4.41
PSMD2-208ENST00000459910 BAZ1BQ9UIG0 1483 aaKnown RBP42.55■■■■■ 4.4
PSMD2-208ENST00000459910 WIZO95785 1651 aa42.15■■■■■ 4.34
PSMD2-208ENST00000459910 ERCC6Q03468 1493 aa42.1■■■■■ 4.33
PSMD2-208ENST00000459910 NESP48681 1621 aa41.97■■■■■ 4.31
PSMD2-208ENST00000459910 LAMC3Q9Y6N6 1575 aa41.93■■■■■ 4.3
PSMD2-208ENST00000459910 RSF1Q96T23 1441 aaPredicted RBP41.93■■■■■ 4.3
PSMD2-208ENST00000459910 CUX2O14529 1486 aa41.77■■■■■ 4.28
PSMD2-208ENST00000459910 TOP2AP11388 1531 aaKnown RBP41.72■■■■■ 4.27
PSMD2-208ENST00000459910 PDS5BQ9NTI5 1447 aa41.63■■■■■ 4.26
PSMD2-208ENST00000459910 CADPSQ9ULU8 1353 aa41.63■■■■■ 4.25
PSMD2-208ENST00000459910 KIF21AQ7Z4S6 1674 aa41.59■■■■■ 4.25
PSMD2-208ENST00000459910 THOC2Q8NI27 1593 aaKnown RBP41.52■■■■■ 4.24
PSMD2-208ENST00000459910 CFTRP13569 1480 aa41.3■■■■■ 4.2
PSMD2-208ENST00000459910 CEP164Q9UPV0 1460 aa41.23■■■■■ 4.19
PSMD2-208ENST00000459910 MRC2Q9UBG0 1479 aa41.22■■■■■ 4.19
PSMD2-208ENST00000459910 FANCD2Q9BXW9 1451 aa41.19■■■■■ 4.18
PSMD2-208ENST00000459910 CCDC88BA6NC98 1476 aa41.15■■■■■ 4.18
PSMD2-208ENST00000459910 PRDM2Q13029 1718 aa41.14■■■■■ 4.18
PSMD2-208ENST00000459910 WDR62O43379 1518 aa41.1■■■■■ 4.17
PSMD2-208ENST00000459910 DNAJC5Q9H3Z4 198 aa40.83■■■■■ 4.13
PSMD2-208ENST00000459910 URB2Q14146 1524 aaKnown RBP40.77■■■■■ 4.12
PSMD2-208ENST00000459910 SUPT5HO00267 1087 aaKnown RBP40.58■■■■■ 4.09
PSMD2-208ENST00000459910 ABCC8Q09428 1581 aa40.51■■■■■ 4.08
PSMD2-208ENST00000459910 TOPBP1Q92547 1522 aa40.47■■■■■ 4.07
PSMD2-208ENST00000459910 DNMBPQ6XZF7 1577 aa40.45■■■■■ 4.07
PSMD2-208ENST00000459910 IFT140Q96RY7 1462 aa40.35■■■■■ 4.05
PSMD2-208ENST00000459910 ZNF608Q9ULD9 1512 aaPredicted RBP40.13■■■■■ 4.01
PSMD2-208ENST00000459910 POLA1P09884 1462 aaPredicted RBP40.11■■■■■ 4.01
PSMD2-208ENST00000459910 TARBP1Q13395 1621 aaKnown RBP40.08■■■■■ 4.01
PSMD2-208ENST00000459910 EIF4G3O43432 1585 aaKnown RBP40.07■■■■■ 4.01
PSMD2-208ENST00000459910 CUX1P39880 1505 aa40■■■■□ 3.99
PSMD2-208ENST00000459910 FGD5Q6ZNL6 1462 aa39.95■■■■□ 3.99
PSMD2-208ENST00000459910 SOGA1O94964 1423 aa39.91■■■■□ 3.98
PSMD2-208ENST00000459910 OSCARQ8IYS5 282 aa39.89■■■■□ 3.98
PSMD2-208ENST00000459910 RAD54L2Q9Y4B4 1467 aa39.88■■■■□ 3.98
PSMD2-208ENST00000459910 AQRO60306 1485 aaKnown RBP eCLIP39.85■■■■□ 3.978e-7■■□□□ 13.7
PSMD2-208ENST00000459910 WDR97A6NE52 1622 aa39.84■■■■□ 3.97
PSMD2-208ENST00000459910 TDRD9Q8NDG6 1382 aaKnown RBP39.71■■■■□ 3.95
PSMD2-208ENST00000459910 CHD1O14646 1710 aa39.66■■■■□ 3.94
PSMD2-208ENST00000459910 BIVM-ERCC5R4GMW8 1640 aa39.62■■■■□ 3.93
PSMD2-208ENST00000459910 WRNQ14191 1432 aaPredicted RBP eCLIP39.61■■■■□ 3.93
PSMD2-208ENST00000459910 TOP2BQ02880 1626 aa39.61■■■■□ 3.93
PSMD2-208ENST00000459910 GRIN2BQ13224 1484 aa39.55■■■■□ 3.92
PSMD2-208ENST00000459910 ABCA10Q8WWZ4 1543 aa39.55■■■■□ 3.92
PSMD2-208ENST00000459910 SNAPC4Q5SXM2 1469 aa39.54■■■■□ 3.92
PSMD2-208ENST00000459910 SYNJ1O43426 1573 aa39.54■■■■□ 3.92
PSMD2-208ENST00000459910 PBRM1Q86U86 1689 aa39.52■■■■□ 3.92
PSMD2-208ENST00000459910 FBLN2P98095 1184 aa39.51■■■■□ 3.92
PSMD2-208ENST00000459910 MAGI1Q96QZ7 1491 aaPredicted RBP39.5■■■■□ 3.91
PSMD2-208ENST00000459910 GAPVD1Q14C86 1478 aa39.49■■■■□ 3.91
PSMD2-208ENST00000459910 ABCA5Q8WWZ7 1642 aa39.47■■■■□ 3.91
PSMD2-208ENST00000459910 TRIM41Q8WV44 630 aa39.39■■■■□ 3.9
PSMD2-208ENST00000459910 RIMBP3CA6NJZ7 1639 aa39.36■■■■□ 3.89
PSMD2-208ENST00000459910 RIMBP3BA6NNM3 1639 aa39.36■■■■□ 3.89
PSMD2-208ENST00000459910 RIMBP3Q9UFD9 1639 aa39.36■■■■□ 3.89
PSMD2-208ENST00000459910 CHMP7Q8WUX9 453 aaPredicted RBP39.34■■■■□ 3.89
PSMD2-208ENST00000459910 SYNJ2O15056 1496 aa39.34■■■■□ 3.89
PSMD2-208ENST00000459910 ARHGEF11O15085 1522 aa39.3■■■■□ 3.88
PSMD2-208ENST00000459910 CLASP1Q7Z460 1538 aa39.15■■■■□ 3.86
PSMD2-208ENST00000459910 ADAMTS12P58397 1594 aa39.13■■■■□ 3.85
PSMD2-208ENST00000459910 ERICH3Q5RHP9 1530 aa39.11■■■■□ 3.85
PSMD2-208ENST00000459910 GRIN2AQ12879 1464 aa39.03■■■■□ 3.84
PSMD2-208ENST00000459910 FHAD1B1AJZ9 1412 aa39.01■■■■□ 3.84
PSMD2-208ENST00000459910 ARAP1Q96P48 1450 aa38.92■■■■□ 3.82
PSMD2-208ENST00000459910 CYB5RLQ6IPT4 315 aa38.89■■■■□ 3.82
PSMD2-208ENST00000459910 CEP170Q5SW79 1584 aa38.84■■■■□ 3.81
PSMD2-208ENST00000459910 KIF27Q86VH2 1401 aa38.84■■■■□ 3.81
PSMD2-208ENST00000459910 NUP160Q12769 1436 aa38.83■■■■□ 3.81
PSMD2-208ENST00000459910 CUL7Q14999 1698 aa38.74■■■■□ 3.79
PSMD2-208ENST00000459910 SHROOM2Q13796 1616 aa38.63■■■■□ 3.78
PSMD2-208ENST00000459910 IGF1RP08069 1367 aa38.62■■■■□ 3.77
PSMD2-208ENST00000459910 RUSC2Q8N2Y8 1516 aa38.57■■■■□ 3.76
PSMD2-208ENST00000459910 ERCC6L2Q5T890 1561 aa38.53■■■■□ 3.76
PSMD2-208ENST00000459910 CARMIL1Q5VZK9 1371 aa38.44■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms