RNA–Protein interactions for RNA: ENST00000459822.1

KCNAB2-213, Transcript of potassium voltage-gated channel subfamily A regulatory beta subunit 2, human

TSL 3

Gene KCNAB2, Length 856 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNAB2-213	ENST00000459822	NISCH	Q9Y2I1	1504 aa		43.83	■■■■■ 4.61
KCNAB2-213	ENST00000459822	ABCC9	O60706	1549 aa		39.54	■■■■□ 3.92
KCNAB2-213	ENST00000459822	CCDC180	Q9P1Z9	1646 aa		39.35	■■■■□ 3.89
KCNAB2-213	ENST00000459822	RB1CC1	Q8TDY2	1594 aa		37.56	■■■■□ 3.6
KCNAB2-213	ENST00000459822	NACAD	O15069	1562 aa		37.26	■■■■□ 3.56
KCNAB2-213	ENST00000459822	DCAF8L2	P0C7V8	631 aa		37.22	■■■■□ 3.55
KCNAB2-213	ENST00000459822	DNAJC5B	Q9UF47	199 aa		37.16	■■■■□ 3.54
KCNAB2-213	ENST00000459822	PABPN1	Q86U42	306 aa	Known RBP eCLIP	36.83	■■■■□ 3.49
KCNAB2-213	ENST00000459822	UNC13A	Q9UPW8	1703 aa		36.67	■■■■□ 3.46
KCNAB2-213	ENST00000459822	MYO15B	Q96JP2	1530 aa		36.66	■■■■□ 3.46
KCNAB2-213	ENST00000459822	BICRA	Q9NZM4	1560 aa		36.41	■■■■□ 3.42
KCNAB2-213	ENST00000459822	ZCCHC6	Q5VYS8	1495 aa	Known RBP	36.29	■■■■□ 3.4
KCNAB2-213	ENST00000459822	DCAF1	Q9Y4B6	1507 aa		36.16	■■■■□ 3.38
KCNAB2-213	ENST00000459822	SCRIB	Q14160	1630 aa		35.91	■■■■□ 3.34
KCNAB2-213	ENST00000459822	SHROOM4	Q9ULL8	1493 aa		35.91	■■■■□ 3.34
KCNAB2-213	ENST00000459822	CC2D2A	Q9P2K1	1620 aa		35.68	■■■■□ 3.3
KCNAB2-213	ENST00000459822	CECR2	Q9BXF3	1484 aa		35.61	■■■■□ 3.29
KCNAB2-213	ENST00000459822	EIF4G1	Q04637	1599 aa	Known RBP	35.56	■■■■□ 3.28
KCNAB2-213	ENST00000459822	NCAPD3	P42695	1498 aa		34.39	■■■■□ 3.1
KCNAB2-213	ENST00000459822	ATAD2B	Q9ULI0	1458 aa		34.28	■■■■□ 3.08
KCNAB2-213	ENST00000459822	DNAJC5	Q9H3Z4	198 aa		34.23	■■■■□ 3.07
KCNAB2-213	ENST00000459822	SMARCA4	P51532	1647 aa		34.21	■■■■□ 3.07
KCNAB2-213	ENST00000459822	SMARCA2	P51531	1590 aa		34.19	■■■■□ 3.06
KCNAB2-213	ENST00000459822	ERCC6	Q03468	1493 aa		34.17	■■■■□ 3.06
KCNAB2-213	ENST00000459822	HMGXB3	Q12766	1538 aa		34.11	■■■■□ 3.05
KCNAB2-213	ENST00000459822	CUX2	O14529	1486 aa		34.08	■■■■□ 3.05
KCNAB2-213	ENST00000459822	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	34.04	■■■■□ 3.04
KCNAB2-213	ENST00000459822	BAZ1B	Q9UIG0	1483 aa	Known RBP	33.97	■■■■□ 3.03
KCNAB2-213	ENST00000459822	NES	P48681	1621 aa		33.91	■■■■□ 3.02
KCNAB2-213	ENST00000459822	PEG3	Q9GZU2	1588 aa		33.84	■■■■□ 3.01
KCNAB2-213	ENST00000459822	MROH2B	Q7Z745	1585 aa		33.78	■■■■□ 3
KCNAB2-213	ENST00000459822	LAMC3	Q9Y6N6	1575 aa		33.64	■■■□□ 2.98
KCNAB2-213	ENST00000459822	THOC2	Q8NI27	1593 aa	Known RBP	33.55	■■■□□ 2.96
KCNAB2-213	ENST00000459822	PDS5B	Q9NTI5	1447 aa		33.49	■■■□□ 2.95
KCNAB2-213	ENST00000459822	KIF21A	Q7Z4S6	1674 aa		33.45	■■■□□ 2.95
KCNAB2-213	ENST00000459822	WIZ	O95785	1651 aa		33.39	■■■□□ 2.94
KCNAB2-213	ENST00000459822	CADPS	Q9ULU8	1353 aa		33.38	■■■□□ 2.93
KCNAB2-213	ENST00000459822	MRC2	Q9UBG0	1479 aa		33.18	■■■□□ 2.9
KCNAB2-213	ENST00000459822	WDR62	O43379	1518 aa		33.07	■■■□□ 2.89
KCNAB2-213	ENST00000459822	CEP164	Q9UPV0	1460 aa		33.05	■■■□□ 2.88
KCNAB2-213	ENST00000459822	RSF1	Q96T23	1441 aa	Predicted RBP	33.04	■■■□□ 2.88
KCNAB2-213	ENST00000459822	FANCD2	Q9BXW9	1451 aa		32.99	■■■□□ 2.87
KCNAB2-213	ENST00000459822	CFTR	P13569	1480 aa		32.94	■■■□□ 2.86
KCNAB2-213	ENST00000459822	TOP2A	P11388	1531 aa	Known RBP	32.94	■■■□□ 2.86
KCNAB2-213	ENST00000459822	TRIM41	Q8WV44	630 aa		32.76	■■■□□ 2.83
KCNAB2-213	ENST00000459822	URB2	Q14146	1524 aa	Known RBP	32.71	■■■□□ 2.83
KCNAB2-213	ENST00000459822	PRDM2	Q13029	1718 aa		32.6	■■■□□ 2.81
KCNAB2-213	ENST00000459822	OSCAR	Q8IYS5	282 aa		32.59	■■■□□ 2.81
KCNAB2-213	ENST00000459822	CCDC88B	A6NC98	1476 aa		32.59	■■■□□ 2.81
KCNAB2-213	ENST00000459822	IFT140	Q96RY7	1462 aa		32.39	■■■□□ 2.78
KCNAB2-213	ENST00000459822	TOPBP1	Q92547	1522 aa		32.35	■■■□□ 2.77
KCNAB2-213	ENST00000459822	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.33	■■■□□ 2.77
KCNAB2-213	ENST00000459822	ABCC8	Q09428	1581 aa		32.29	■■■□□ 2.76
KCNAB2-213	ENST00000459822	DNMBP	Q6XZF7	1577 aa		32.21	■■■□□ 2.75
KCNAB2-213	ENST00000459822	EIF4G3	O43432	1585 aa	Known RBP	32.13	■■■□□ 2.73
KCNAB2-213	ENST00000459822	RIMBP3C	A6NJZ7	1639 aa		32.11	■■■□□ 2.73
KCNAB2-213	ENST00000459822	RIMBP3B	A6NNM3	1639 aa		32.11	■■■□□ 2.73
KCNAB2-213	ENST00000459822	RIMBP3	Q9UFD9	1639 aa		32.11	■■■□□ 2.73
KCNAB2-213	ENST00000459822	AQR	O60306	1485 aa	Known RBP eCLIP	32.06	■■■□□ 2.72
KCNAB2-213	ENST00000459822	TARBP1	Q13395	1621 aa	Known RBP	32.04	■■■□□ 2.72
KCNAB2-213	ENST00000459822	POLA1	P09884	1462 aa	Predicted RBP	32	■■■□□ 2.71
KCNAB2-213	ENST00000459822	ARHGEF11	O15085	1522 aa		32	■■■□□ 2.71
KCNAB2-213	ENST00000459822	FBLN2	P98095	1184 aa		31.96	■■■□□ 2.71
KCNAB2-213	ENST00000459822	CHD1	O14646	1710 aa		31.93	■■■□□ 2.7
KCNAB2-213	ENST00000459822	RAD54L2	Q9Y4B4	1467 aa		31.92	■■■□□ 2.7
KCNAB2-213	ENST00000459822	SOGA1	O94964	1423 aa		31.91	■■■□□ 2.7
KCNAB2-213	ENST00000459822	TDRD9	Q8NDG6	1382 aa	Known RBP	31.86	■■■□□ 2.69
KCNAB2-213	ENST00000459822	CYB5RL	Q6IPT4	315 aa		31.86	■■■□□ 2.69
KCNAB2-213	ENST00000459822	FGD5	Q6ZNL6	1462 aa		31.8	■■■□□ 2.68
KCNAB2-213	ENST00000459822	CUX1	P39880	1505 aa		31.74	■■■□□ 2.67
KCNAB2-213	ENST00000459822	SNAPC4	Q5SXM2	1469 aa		31.72	■■■□□ 2.67
KCNAB2-213	ENST00000459822	WDR97	A6NE52	1622 aa		31.7	■■■□□ 2.66
KCNAB2-213	ENST00000459822	CHMP7	Q8WUX9	453 aa	Predicted RBP	31.68	■■■□□ 2.66
KCNAB2-213	ENST00000459822	ARAP1	Q96P48	1450 aa		31.67	■■■□□ 2.66
KCNAB2-213	ENST00000459822	SUPT5H	O00267	1087 aa	Known RBP	31.64	■■■□□ 2.66
KCNAB2-213	ENST00000459822	GRIN2B	Q13224	1484 aa		31.62	■■■□□ 2.65
KCNAB2-213	ENST00000459822	MAGI1	Q96QZ7	1491 aa	Predicted RBP	31.61	■■■□□ 2.65
KCNAB2-213	ENST00000459822	TRH	P20396	242 aa	Predicted RBP	31.58	■■■□□ 2.65
KCNAB2-213	ENST00000459822	SYNJ1	O43426	1573 aa		31.56	■■■□□ 2.64
KCNAB2-213	ENST00000459822	CLASP1	Q7Z460	1538 aa		31.53	■■■□□ 2.64
KCNAB2-213	ENST00000459822	SYNJ2	O15056	1496 aa		31.51	■■■□□ 2.63
KCNAB2-213	ENST00000459822	GAPVD1	Q14C86	1478 aa		31.5	■■■□□ 2.63
KCNAB2-213	ENST00000459822	PBRM1	Q86U86	1689 aa		31.47	■■■□□ 2.63
KCNAB2-213	ENST00000459822	ABCA10	Q8WWZ4	1543 aa		31.43	■■■□□ 2.62
KCNAB2-213	ENST00000459822	ABCA5	Q8WWZ7	1642 aa		31.36	■■■□□ 2.61
KCNAB2-213	ENST00000459822	WRN	Q14191	1432 aa	Predicted RBP eCLIP	31.31	■■■□□ 2.6
KCNAB2-213	ENST00000459822	GRIN2A	Q12879	1464 aa		31.2	■■■□□ 2.58
KCNAB2-213	ENST00000459822	TOP2B	Q02880	1626 aa		31.2	■■■□□ 2.58
KCNAB2-213	ENST00000459822	BIVM-ERCC5	R4GMW8	1640 aa		31.19	■■■□□ 2.58
KCNAB2-213	ENST00000459822	ADAMTS12	P58397	1594 aa		31.14	■■■□□ 2.58
KCNAB2-213	ENST00000459822	FHAD1	B1AJZ9	1412 aa		31.09	■■■□□ 2.57
KCNAB2-213	ENST00000459822	CEP170	Q5SW79	1584 aa		31.08	■■■□□ 2.57
KCNAB2-213	ENST00000459822	NUP160	Q12769	1436 aa		31.07	■■■□□ 2.57
KCNAB2-213	ENST00000459822	ERCC6L2	Q5T890	1561 aa		31.05	■■■□□ 2.56
KCNAB2-213	ENST00000459822	ERICH3	Q5RHP9	1530 aa		31.03	■■■□□ 2.56
KCNAB2-213	ENST00000459822	SHROOM2	Q13796	1616 aa		30.93	■■■□□ 2.54
KCNAB2-213	ENST00000459822	PRG4	Q92954	1404 aa	Predicted RBP	30.84	■■■□□ 2.53
KCNAB2-213	ENST00000459822	JPH4	Q96JJ6	628 aa		30.84	■■■□□ 2.53
KCNAB2-213	ENST00000459822	AEBP2	Q6ZN18	517 aa	Predicted RBP	30.76	■■■□□ 2.51
KCNAB2-213	ENST00000459822	RUSC2	Q8N2Y8	1516 aa		30.69	■■■□□ 2.5

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms