RNA–Protein interactions for RNA: ENST00000459688.1

EGFR-208, Transcript of epidermal growth factor receptor, humanhuman

TSL 3

Gene EGFR, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-208ENST00000459688 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
EGFR-208ENST00000459688 CCDC180Q9P1Z9 1646 aa34.82■■■■□ 3.16
EGFR-208ENST00000459688 ABCC9O60706 1549 aa34.08■■■■□ 3.05
EGFR-208ENST00000459688 DCAF8L2P0C7V8 631 aa32.85■■■□□ 2.85
EGFR-208ENST00000459688 RB1CC1Q8TDY2 1594 aa32.75■■■□□ 2.83
EGFR-208ENST00000459688 ZCCHC6Q5VYS8 1495 aaKnown RBP32.72■■■□□ 2.83
EGFR-208ENST00000459688 NACADO15069 1562 aa32.71■■■□□ 2.83
EGFR-208ENST00000459688 MYO15BQ96JP2 1530 aa32.5■■■□□ 2.79
EGFR-208ENST00000459688 DCAF1Q9Y4B6 1507 aa32.41■■■□□ 2.78
EGFR-208ENST00000459688 UNC13AQ9UPW8 1703 aa32.02■■■□□ 2.72
EGFR-208ENST00000459688 PABPN1Q86U42 306 aaKnown RBP eCLIP31.88■■■□□ 2.69
EGFR-208ENST00000459688 SCRIBQ14160 1630 aa31.88■■■□□ 2.69
EGFR-208ENST00000459688 BICRAQ9NZM4 1560 aa31.77■■■□□ 2.68
EGFR-208ENST00000459688 SHROOM4Q9ULL8 1493 aa31.37■■■□□ 2.61
EGFR-208ENST00000459688 DNAJC5BQ9UF47 199 aa31.17■■■□□ 2.58
EGFR-208ENST00000459688 EIF4G1Q04637 1599 aaKnown RBP30.93■■■□□ 2.54
EGFR-208ENST00000459688 CC2D2AQ9P2K1 1620 aa30.8■■■□□ 2.52
EGFR-208ENST00000459688 CECR2Q9BXF3 1484 aa30.6■■■□□ 2.49
EGFR-208ENST00000459688 SMARCA4P51532 1647 aa30.44■■■□□ 2.46
EGFR-208ENST00000459688 BAZ1AQ9NRL2 1556 aaPredicted RBP30.41■■■□□ 2.46
EGFR-208ENST00000459688 MROH2BQ7Z745 1585 aa30.28■■■□□ 2.44
EGFR-208ENST00000459688 ATAD2BQ9ULI0 1458 aa30.25■■■□□ 2.43
EGFR-208ENST00000459688 SMARCA2P51531 1590 aa30.2■■■□□ 2.43
EGFR-208ENST00000459688 NCAPD3P42695 1498 aa30.18■■■□□ 2.42
EGFR-208ENST00000459688 PEG3Q9GZU2 1588 aa30.1■■■□□ 2.41
EGFR-208ENST00000459688 HMGXB3Q12766 1538 aa30.06■■■□□ 2.4
EGFR-208ENST00000459688 BAZ1BQ9UIG0 1483 aaKnown RBP30.03■■■□□ 2.4
EGFR-208ENST00000459688 WIZO95785 1651 aa29.97■■■□□ 2.39
EGFR-208ENST00000459688 RSF1Q96T23 1441 aaPredicted RBP29.95■■■□□ 2.38
EGFR-208ENST00000459688 TOP2AP11388 1531 aaKnown RBP29.62■■■□□ 2.33
EGFR-208ENST00000459688 NESP48681 1621 aa29.52■■■□□ 2.32
EGFR-208ENST00000459688 LAMC3Q9Y6N6 1575 aa29.39■■■□□ 2.29
EGFR-208ENST00000459688 ERCC6Q03468 1493 aa29.36■■■□□ 2.29
EGFR-208ENST00000459688 SUPT5HO00267 1087 aaKnown RBP29.34■■■□□ 2.29
EGFR-208ENST00000459688 CADPSQ9ULU8 1353 aa29.33■■■□□ 2.29
EGFR-208ENST00000459688 CCDC88BA6NC98 1476 aa29.29■■■□□ 2.28
EGFR-208ENST00000459688 PDS5BQ9NTI5 1447 aa29.2■■■□□ 2.26
EGFR-208ENST00000459688 CFTRP13569 1480 aa29.17■■■□□ 2.26
EGFR-208ENST00000459688 KIF21AQ7Z4S6 1674 aa29.15■■■□□ 2.26
EGFR-208ENST00000459688 FANCD2Q9BXW9 1451 aa29.04■■■□□ 2.24
EGFR-208ENST00000459688 THOC2Q8NI27 1593 aaKnown RBP29.01■■■□□ 2.24
EGFR-208ENST00000459688 CEP164Q9UPV0 1460 aa28.98■■■□□ 2.23
EGFR-208ENST00000459688 CUX2O14529 1486 aa28.95■■■□□ 2.22
EGFR-208ENST00000459688 PRDM2Q13029 1718 aa28.94■■■□□ 2.22
EGFR-208ENST00000459688 MRC2Q9UBG0 1479 aa28.91■■■□□ 2.22
EGFR-208ENST00000459688 WDR62O43379 1518 aa28.8■■■□□ 2.2
EGFR-208ENST00000459688 URB2Q14146 1524 aaKnown RBP28.74■■■□□ 2.19
EGFR-208ENST00000459688 TOPBP1Q92547 1522 aa28.57■■■□□ 2.16
EGFR-208ENST00000459688 DNMBPQ6XZF7 1577 aa28.54■■■□□ 2.16
EGFR-208ENST00000459688 ABCC8Q09428 1581 aa28.51■■■□□ 2.15
EGFR-208ENST00000459688 CUX1P39880 1505 aa28.4■■■□□ 2.14
EGFR-208ENST00000459688 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
EGFR-208ENST00000459688 POLA1P09884 1462 aaPredicted RBP28.34■■■□□ 2.13
EGFR-208ENST00000459688 FGD5Q6ZNL6 1462 aa28.29■■■□□ 2.12
EGFR-208ENST00000459688 ZNF608Q9ULD9 1512 aaPredicted RBP28.26■■■□□ 2.11
EGFR-208ENST00000459688 WRNQ14191 1432 aaPredicted RBP eCLIP28.25■■■□□ 2.11
EGFR-208ENST00000459688 RAD54L2Q9Y4B4 1467 aa28.24■■■□□ 2.11
EGFR-208ENST00000459688 TARBP1Q13395 1621 aaKnown RBP28.24■■■□□ 2.11
EGFR-208ENST00000459688 SOGA1O94964 1423 aa28.22■■■□□ 2.11
EGFR-208ENST00000459688 SYNJ1O43426 1573 aa28.2■■■□□ 2.1
EGFR-208ENST00000459688 TOP2BQ02880 1626 aa28.15■■■□□ 2.1
EGFR-208ENST00000459688 EIF4G3O43432 1585 aaKnown RBP28.15■■■□□ 2.1
EGFR-208ENST00000459688 BIVM-ERCC5R4GMW8 1640 aa28.14■■■□□ 2.1
EGFR-208ENST00000459688 AQRO60306 1485 aaKnown RBP eCLIP28.1■■■□□ 2.09
EGFR-208ENST00000459688 TDRD9Q8NDG6 1382 aaKnown RBP28.08■■■□□ 2.09
EGFR-208ENST00000459688 WDR97A6NE52 1622 aa28.03■■■□□ 2.08
EGFR-208ENST00000459688 ABCA10Q8WWZ4 1543 aa27.98■■■□□ 2.07
EGFR-208ENST00000459688 DNAJC5Q9H3Z4 198 aa27.95■■■□□ 2.06
EGFR-208ENST00000459688 GAPVD1Q14C86 1478 aa27.89■■■□□ 2.06
EGFR-208ENST00000459688 ABCA5Q8WWZ7 1642 aa27.89■■■□□ 2.05
EGFR-208ENST00000459688 GRIN2BQ13224 1484 aa27.87■■■□□ 2.05
EGFR-208ENST00000459688 SNAPC4Q5SXM2 1469 aa27.85■■■□□ 2.05
EGFR-208ENST00000459688 PBRM1Q86U86 1689 aa27.84■■■□□ 2.05
EGFR-208ENST00000459688 FBLN2P98095 1184 aa27.79■■■□□ 2.04
EGFR-208ENST00000459688 OSCARQ8IYS5 282 aa27.78■■■□□ 2.04
EGFR-208ENST00000459688 MAGI1Q96QZ7 1491 aaPredicted RBP27.77■■■□□ 2.04
EGFR-208ENST00000459688 CHD1O14646 1710 aa27.76■■■□□ 2.03
EGFR-208ENST00000459688 CHMP7Q8WUX9 453 aaPredicted RBP27.68■■■□□ 2.02
EGFR-208ENST00000459688 SYNJ2O15056 1496 aa27.68■■■□□ 2.02
EGFR-208ENST00000459688 TRIM41Q8WV44 630 aa27.67■■■□□ 2.02
EGFR-208ENST00000459688 ERICH3Q5RHP9 1530 aa27.65■■■□□ 2.02
EGFR-208ENST00000459688 KIF27Q86VH2 1401 aa27.64■■■□□ 2.02
EGFR-208ENST00000459688 ADAMTS12P58397 1594 aa27.63■■■□□ 2.01
EGFR-208ENST00000459688 FHAD1B1AJZ9 1412 aa27.56■■■□□ 2
EGFR-208ENST00000459688 GRIN2AQ12879 1464 aa27.52■■■□□ 2
EGFR-208ENST00000459688 IGF1RP08069 1367 aa27.5■■□□□ 1.99
EGFR-208ENST00000459688 RUSC2Q8N2Y8 1516 aa27.46■■□□□ 1.99
EGFR-208ENST00000459688 CLASP1Q7Z460 1538 aa27.45■■□□□ 1.98
EGFR-208ENST00000459688 CUL7Q14999 1698 aa27.43■■□□□ 1.98
EGFR-208ENST00000459688 CEP170Q5SW79 1584 aa27.4■■□□□ 1.98
EGFR-208ENST00000459688 NUP160Q12769 1436 aa27.37■■□□□ 1.97
EGFR-208ENST00000459688 CHIC1Q5VXU3 224 aa27.37■■□□□ 1.97
EGFR-208ENST00000459688 RIMBP3CA6NJZ7 1639 aa27.36■■□□□ 1.97
EGFR-208ENST00000459688 RIMBP3BA6NNM3 1639 aa27.36■■□□□ 1.97
EGFR-208ENST00000459688 RIMBP3Q9UFD9 1639 aa27.36■■□□□ 1.97
EGFR-208ENST00000459688 ARHGEF11O15085 1522 aa27.36■■□□□ 1.97
EGFR-208ENST00000459688 CARMIL1Q5VZK9 1371 aa27.35■■□□□ 1.97
EGFR-208ENST00000459688 RAPGEF2Q9Y4G8 1499 aa27.2■■□□□ 1.95
EGFR-208ENST00000459688 FAM9AQ8IZU1 332 aaPredicted RBP27.16■■□□□ 1.94
EGFR-208ENST00000459688 ARAP1Q96P48 1450 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms