RNA–Protein interactions for RNA: ENST00000459640.5

NECAP2-204, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 3

Gene NECAP2, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-204ENST00000459640 NISCHQ9Y2I1 1504 aa34.65■■■■□ 3.14
NECAP2-204ENST00000459640 CCDC180Q9P1Z9 1646 aa30.95■■■□□ 2.54
NECAP2-204ENST00000459640 ABCC9O60706 1549 aa30.45■■■□□ 2.47
NECAP2-204ENST00000459640 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
NECAP2-204ENST00000459640 NACADO15069 1562 aa29.07■■■□□ 2.24
NECAP2-204ENST00000459640 DCAF8L2P0C7V8 631 aa29.02■■■□□ 2.24
NECAP2-204ENST00000459640 ZCCHC6Q5VYS8 1495 aaKnown RBP28.84■■■□□ 2.21
NECAP2-204ENST00000459640 MYO15BQ96JP2 1530 aa28.77■■■□□ 2.2
NECAP2-204ENST00000459640 UNC13AQ9UPW8 1703 aa28.67■■■□□ 2.18
NECAP2-204ENST00000459640 DCAF1Q9Y4B6 1507 aa28.6■■■□□ 2.17
NECAP2-204ENST00000459640 PABPN1Q86U42 306 aaKnown RBP eCLIP28.38■■■□□ 2.13
NECAP2-204ENST00000459640 BICRAQ9NZM4 1560 aa28.34■■■□□ 2.13
NECAP2-204ENST00000459640 SCRIBQ14160 1630 aa28.27■■■□□ 2.12
NECAP2-204ENST00000459640 DNAJC5BQ9UF47 199 aa28.07■■■□□ 2.08
NECAP2-204ENST00000459640 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
NECAP2-204ENST00000459640 EIF4G1Q04637 1599 aaKnown RBP27.59■■■□□ 2.01
NECAP2-204ENST00000459640 CC2D2AQ9P2K1 1620 aa27.56■■■□□ 2
NECAP2-204ENST00000459640 CECR2Q9BXF3 1484 aa27.34■■□□□ 1.97
NECAP2-204ENST00000459640 SMARCA4P51532 1647 aa26.98■■□□□ 1.91
NECAP2-204ENST00000459640 BAZ1AQ9NRL2 1556 aaPredicted RBP26.87■■□□□ 1.89
NECAP2-204ENST00000459640 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
NECAP2-204ENST00000459640 NCAPD3P42695 1498 aa26.78■■□□□ 1.88
NECAP2-204ENST00000459640 SMARCA2P51531 1590 aa26.78■■□□□ 1.88
NECAP2-204ENST00000459640 MROH2BQ7Z745 1585 aa26.74■■□□□ 1.87
NECAP2-204ENST00000459640 HMGXB3Q12766 1538 aa26.69■■□□□ 1.86
NECAP2-204ENST00000459640 PEG3Q9GZU2 1588 aa26.66■■□□□ 1.86
NECAP2-204ENST00000459640 BAZ1BQ9UIG0 1483 aaKnown RBP26.61■■□□□ 1.85
NECAP2-204ENST00000459640 WIZO95785 1651 aa26.5■■□□□ 1.83
NECAP2-204ENST00000459640 RSF1Q96T23 1441 aaPredicted RBP26.31■■□□□ 1.8
NECAP2-204ENST00000459640 NESP48681 1621 aa26.31■■□□□ 1.8
NECAP2-204ENST00000459640 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
NECAP2-204ENST00000459640 LAMC3Q9Y6N6 1575 aa26.17■■□□□ 1.78
NECAP2-204ENST00000459640 TOP2AP11388 1531 aaKnown RBP26.14■■□□□ 1.78
NECAP2-204ENST00000459640 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
NECAP2-204ENST00000459640 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
NECAP2-204ENST00000459640 CUX2O14529 1486 aa25.98■■□□□ 1.75
NECAP2-204ENST00000459640 THOC2Q8NI27 1593 aaKnown RBP25.97■■□□□ 1.75
NECAP2-204ENST00000459640 PDS5BQ9NTI5 1447 aa25.94■■□□□ 1.74
NECAP2-204ENST00000459640 CFTRP13569 1480 aa25.82■■□□□ 1.72
NECAP2-204ENST00000459640 CCDC88BA6NC98 1476 aa25.81■■□□□ 1.72
NECAP2-204ENST00000459640 PRDM2Q13029 1718 aa25.78■■□□□ 1.72
NECAP2-204ENST00000459640 FANCD2Q9BXW9 1451 aa25.75■■□□□ 1.71
NECAP2-204ENST00000459640 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
NECAP2-204ENST00000459640 CEP164Q9UPV0 1460 aa25.74■■□□□ 1.71
NECAP2-204ENST00000459640 WDR62O43379 1518 aa25.68■■□□□ 1.7
NECAP2-204ENST00000459640 URB2Q14146 1524 aaKnown RBP25.53■■□□□ 1.68
NECAP2-204ENST00000459640 SUPT5HO00267 1087 aaKnown RBP25.53■■□□□ 1.68
NECAP2-204ENST00000459640 DNAJC5Q9H3Z4 198 aa25.36■■□□□ 1.65
NECAP2-204ENST00000459640 TOPBP1Q92547 1522 aa25.33■■□□□ 1.65
NECAP2-204ENST00000459640 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
NECAP2-204ENST00000459640 ABCC8Q09428 1581 aa25.24■■□□□ 1.63
NECAP2-204ENST00000459640 IFT140Q96RY7 1462 aa25.18■■□□□ 1.62
NECAP2-204ENST00000459640 ZNF608Q9ULD9 1512 aaPredicted RBP25.14■■□□□ 1.62
NECAP2-204ENST00000459640 CUX1P39880 1505 aa25.11■■□□□ 1.61
NECAP2-204ENST00000459640 POLA1P09884 1462 aaPredicted RBP25.1■■□□□ 1.61
NECAP2-204ENST00000459640 TARBP1Q13395 1621 aaKnown RBP25.1■■□□□ 1.61
NECAP2-204ENST00000459640 EIF4G3O43432 1585 aaKnown RBP25.08■■□□□ 1.61
NECAP2-204ENST00000459640 FGD5Q6ZNL6 1462 aa25.03■■□□□ 1.6
NECAP2-204ENST00000459640 RAD54L2Q9Y4B4 1467 aa25.02■■□□□ 1.6
NECAP2-204ENST00000459640 SOGA1O94964 1423 aa24.96■■□□□ 1.59
NECAP2-204ENST00000459640 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.593e-7■■■■□ 19.8
NECAP2-204ENST00000459640 WDR97A6NE52 1622 aa24.91■■□□□ 1.58
NECAP2-204ENST00000459640 TDRD9Q8NDG6 1382 aaKnown RBP24.86■■□□□ 1.57
NECAP2-204ENST00000459640 CHD1O14646 1710 aa24.86■■□□□ 1.57
NECAP2-204ENST00000459640 BIVM-ERCC5R4GMW8 1640 aa24.86■■□□□ 1.57
NECAP2-204ENST00000459640 SYNJ1O43426 1573 aa24.85■■□□□ 1.57
NECAP2-204ENST00000459640 TOP2BQ02880 1626 aa24.83■■□□□ 1.56
NECAP2-204ENST00000459640 WRNQ14191 1432 aaPredicted RBP eCLIP24.82■■□□□ 1.562e-6■■■■□ 22.3
NECAP2-204ENST00000459640 OSCARQ8IYS5 282 aa24.82■■□□□ 1.56
NECAP2-204ENST00000459640 PBRM1Q86U86 1689 aa24.78■■□□□ 1.56
NECAP2-204ENST00000459640 SNAPC4Q5SXM2 1469 aa24.75■■□□□ 1.55
NECAP2-204ENST00000459640 ABCA10Q8WWZ4 1543 aa24.74■■□□□ 1.55
NECAP2-204ENST00000459640 ABCA5Q8WWZ7 1642 aa24.73■■□□□ 1.55
NECAP2-204ENST00000459640 GRIN2BQ13224 1484 aa24.7■■□□□ 1.54
NECAP2-204ENST00000459640 GAPVD1Q14C86 1478 aa24.69■■□□□ 1.54
NECAP2-204ENST00000459640 FBLN2P98095 1184 aa24.68■■□□□ 1.54
NECAP2-204ENST00000459640 MAGI1Q96QZ7 1491 aaPredicted RBP24.65■■□□□ 1.54
NECAP2-204ENST00000459640 RIMBP3CA6NJZ7 1639 aa24.6■■□□□ 1.53
NECAP2-204ENST00000459640 RIMBP3BA6NNM3 1639 aa24.6■■□□□ 1.53
NECAP2-204ENST00000459640 RIMBP3Q9UFD9 1639 aa24.6■■□□□ 1.53
NECAP2-204ENST00000459640 SYNJ2O15056 1496 aa24.57■■□□□ 1.52
NECAP2-204ENST00000459640 CHMP7Q8WUX9 453 aaPredicted RBP24.54■■□□□ 1.52
NECAP2-204ENST00000459640 TRIM41Q8WV44 630 aa24.54■■□□□ 1.52
NECAP2-204ENST00000459640 ARHGEF11O15085 1522 aa24.51■■□□□ 1.51
NECAP2-204ENST00000459640 ADAMTS12P58397 1594 aa24.51■■□□□ 1.51
NECAP2-204ENST00000459640 CLASP1Q7Z460 1538 aa24.48■■□□□ 1.51
NECAP2-204ENST00000459640 ERICH3Q5RHP9 1530 aa24.45■■□□□ 1.5
NECAP2-204ENST00000459640 GRIN2AQ12879 1464 aa24.4■■□□□ 1.5
NECAP2-204ENST00000459640 FHAD1B1AJZ9 1412 aa24.37■■□□□ 1.49
NECAP2-204ENST00000459640 CEP170Q5SW79 1584 aa24.35■■□□□ 1.49
NECAP2-204ENST00000459640 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
NECAP2-204ENST00000459640 KIF27Q86VH2 1401 aa24.29■■□□□ 1.48
NECAP2-204ENST00000459640 NUP160Q12769 1436 aa24.27■■□□□ 1.48
NECAP2-204ENST00000459640 CYB5RLQ6IPT4 315 aa24.25■■□□□ 1.47
NECAP2-204ENST00000459640 CUL7Q14999 1698 aa24.24■■□□□ 1.47
NECAP2-204ENST00000459640 IGF1RP08069 1367 aa24.2■■□□□ 1.46
NECAP2-204ENST00000459640 SHROOM2Q13796 1616 aa24.18■■□□□ 1.46
NECAP2-204ENST00000459640 ERCC6L2Q5T890 1561 aa24.18■■□□□ 1.46
NECAP2-204ENST00000459640 RUSC2Q8N2Y8 1516 aa24.16■■□□□ 1.46
NECAP2-204ENST00000459640 CARMIL1Q5VZK9 1371 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms