RNA–Protein interactions for RNA: ENST00000458606.5

AMER3-204, Transcript of APC membrane recruitment protein 3, humanhuman

TSL 4

Gene AMER3, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMER3-204ENST00000458606 NISCHQ9Y2I1 1504 aa43.49■■■■■ 4.55
AMER3-204ENST00000458606 CCDC180Q9P1Z9 1646 aa38.89■■■■□ 3.82
AMER3-204ENST00000458606 ABCC9O60706 1549 aa38.6■■■■□ 3.77
AMER3-204ENST00000458606 RB1CC1Q8TDY2 1594 aa36.87■■■■□ 3.49
AMER3-204ENST00000458606 NACADO15069 1562 aa36.7■■■■□ 3.46
AMER3-204ENST00000458606 DCAF8L2P0C7V8 631 aa36.52■■■■□ 3.44
AMER3-204ENST00000458606 MYO15BQ96JP2 1530 aa36.3■■■■□ 3.4
AMER3-204ENST00000458606 ZCCHC6Q5VYS8 1495 aaKnown RBP36.13■■■■□ 3.37
AMER3-204ENST00000458606 UNC13AQ9UPW8 1703 aa36■■■■□ 3.35
AMER3-204ENST00000458606 PABPN1Q86U42 306 aaKnown RBP eCLIP35.97■■■■□ 3.35
AMER3-204ENST00000458606 DCAF1Q9Y4B6 1507 aa35.95■■■■□ 3.35
AMER3-204ENST00000458606 DNAJC5BQ9UF47 199 aa35.91■■■■□ 3.34
AMER3-204ENST00000458606 BICRAQ9NZM4 1560 aa35.8■■■■□ 3.32
AMER3-204ENST00000458606 SCRIBQ14160 1630 aa35.47■■■■□ 3.27
AMER3-204ENST00000458606 SHROOM4Q9ULL8 1493 aa35.37■■■■□ 3.25
AMER3-204ENST00000458606 EIF4G1Q04637 1599 aaKnown RBP34.9■■■■□ 3.18
AMER3-204ENST00000458606 CC2D2AQ9P2K1 1620 aa34.88■■■■□ 3.17
AMER3-204ENST00000458606 CECR2Q9BXF3 1484 aa34.75■■■■□ 3.15
AMER3-204ENST00000458606 NCAPD3P42695 1498 aa33.88■■■■□ 3.01
AMER3-204ENST00000458606 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
AMER3-204ENST00000458606 ATAD2BQ9ULI0 1458 aa33.82■■■■□ 3
AMER3-204ENST00000458606 SMARCA2P51531 1590 aa33.74■■■□□ 2.99
AMER3-204ENST00000458606 BAZ1AQ9NRL2 1556 aaPredicted RBP33.74■■■□□ 2.99
AMER3-204ENST00000458606 HMGXB3Q12766 1538 aa33.67■■■□□ 2.98
AMER3-204ENST00000458606 PEG3Q9GZU2 1588 aa33.54■■■□□ 2.96
AMER3-204ENST00000458606 MROH2BQ7Z745 1585 aa33.51■■■□□ 2.96
AMER3-204ENST00000458606 BAZ1BQ9UIG0 1483 aaKnown RBP33.51■■■□□ 2.96
AMER3-204ENST00000458606 ERCC6Q03468 1493 aa33.31■■■□□ 2.92
AMER3-204ENST00000458606 NESP48681 1621 aa33.25■■■□□ 2.91
AMER3-204ENST00000458606 CUX2O14529 1486 aa33.15■■■□□ 2.9
AMER3-204ENST00000458606 WIZO95785 1651 aa33.11■■■□□ 2.89
AMER3-204ENST00000458606 LAMC3Q9Y6N6 1575 aa33.06■■■□□ 2.88
AMER3-204ENST00000458606 RSF1Q96T23 1441 aaPredicted RBP32.94■■■□□ 2.86
AMER3-204ENST00000458606 THOC2Q8NI27 1593 aaKnown RBP32.87■■■□□ 2.85
AMER3-204ENST00000458606 PDS5BQ9NTI5 1447 aa32.86■■■□□ 2.85
AMER3-204ENST00000458606 CADPSQ9ULU8 1353 aa32.85■■■□□ 2.85
AMER3-204ENST00000458606 KIF21AQ7Z4S6 1674 aa32.82■■■□□ 2.84
AMER3-204ENST00000458606 DNAJC5Q9H3Z4 198 aa32.75■■■□□ 2.83
AMER3-204ENST00000458606 TOP2AP11388 1531 aaKnown RBP32.75■■■□□ 2.83
AMER3-204ENST00000458606 MRC2Q9UBG0 1479 aa32.58■■■□□ 2.81
AMER3-204ENST00000458606 CFTRP13569 1480 aa32.55■■■□□ 2.8
AMER3-204ENST00000458606 CEP164Q9UPV0 1460 aa32.5■■■□□ 2.79
AMER3-204ENST00000458606 FANCD2Q9BXW9 1451 aa32.49■■■□□ 2.79
AMER3-204ENST00000458606 WDR62O43379 1518 aa32.49■■■□□ 2.79
AMER3-204ENST00000458606 CCDC88BA6NC98 1476 aa32.35■■■□□ 2.77
AMER3-204ENST00000458606 PRDM2Q13029 1718 aa32.22■■■□□ 2.75
AMER3-204ENST00000458606 URB2Q14146 1524 aaKnown RBP32.21■■■□□ 2.75
AMER3-204ENST00000458606 TOPBP1Q92547 1522 aa31.91■■■□□ 2.7
AMER3-204ENST00000458606 ABCC8Q09428 1581 aa31.85■■■□□ 2.69
AMER3-204ENST00000458606 IFT140Q96RY7 1462 aa31.84■■■□□ 2.69
AMER3-204ENST00000458606 DNMBPQ6XZF7 1577 aa31.83■■■□□ 2.69
AMER3-204ENST00000458606 ZNF608Q9ULD9 1512 aaPredicted RBP31.76■■■□□ 2.68
AMER3-204ENST00000458606 SUPT5HO00267 1087 aaKnown RBP31.67■■■□□ 2.66
AMER3-204ENST00000458606 OSCARQ8IYS5 282 aa31.65■■■□□ 2.66
AMER3-204ENST00000458606 EIF4G3O43432 1585 aaKnown RBP31.61■■■□□ 2.65
AMER3-204ENST00000458606 POLA1P09884 1462 aaPredicted RBP31.61■■■□□ 2.65
AMER3-204ENST00000458606 TARBP1Q13395 1621 aaKnown RBP31.6■■■□□ 2.65
AMER3-204ENST00000458606 AQRO60306 1485 aaKnown RBP eCLIP31.5■■■□□ 2.63
AMER3-204ENST00000458606 RAD54L2Q9Y4B4 1467 aa31.48■■■□□ 2.63
AMER3-204ENST00000458606 CUX1P39880 1505 aa31.48■■■□□ 2.63
AMER3-204ENST00000458606 FGD5Q6ZNL6 1462 aa31.46■■■□□ 2.63
AMER3-204ENST00000458606 SOGA1O94964 1423 aa31.45■■■□□ 2.63
AMER3-204ENST00000458606 TRIM41Q8WV44 630 aa31.45■■■□□ 2.63
AMER3-204ENST00000458606 TDRD9Q8NDG6 1382 aaKnown RBP31.36■■■□□ 2.61
AMER3-204ENST00000458606 WDR97A6NE52 1622 aa31.31■■■□□ 2.6
AMER3-204ENST00000458606 CHD1O14646 1710 aa31.29■■■□□ 2.6
AMER3-204ENST00000458606 RIMBP3CA6NJZ7 1639 aa31.24■■■□□ 2.59
AMER3-204ENST00000458606 RIMBP3BA6NNM3 1639 aa31.24■■■□□ 2.59
AMER3-204ENST00000458606 RIMBP3Q9UFD9 1639 aa31.24■■■□□ 2.59
AMER3-204ENST00000458606 SNAPC4Q5SXM2 1469 aa31.21■■■□□ 2.59
AMER3-204ENST00000458606 FBLN2P98095 1184 aa31.21■■■□□ 2.59
AMER3-204ENST00000458606 ARHGEF11O15085 1522 aa31.18■■■□□ 2.58
AMER3-204ENST00000458606 GRIN2BQ13224 1484 aa31.16■■■□□ 2.58
AMER3-204ENST00000458606 MAGI1Q96QZ7 1491 aaPredicted RBP31.14■■■□□ 2.57
AMER3-204ENST00000458606 ABCA10Q8WWZ4 1543 aa31.12■■■□□ 2.57
AMER3-204ENST00000458606 GAPVD1Q14C86 1478 aa31.08■■■□□ 2.57
AMER3-204ENST00000458606 WRNQ14191 1432 aaPredicted RBP eCLIP31.07■■■□□ 2.57
AMER3-204ENST00000458606 PBRM1Q86U86 1689 aa31.05■■■□□ 2.56
AMER3-204ENST00000458606 TOP2BQ02880 1626 aa31.05■■■□□ 2.56
AMER3-204ENST00000458606 ABCA5Q8WWZ7 1642 aa31.05■■■□□ 2.56
AMER3-204ENST00000458606 BIVM-ERCC5R4GMW8 1640 aa31.05■■■□□ 2.56
AMER3-204ENST00000458606 CHMP7Q8WUX9 453 aaPredicted RBP31.04■■■□□ 2.56
AMER3-204ENST00000458606 SYNJ2O15056 1496 aa31.03■■■□□ 2.56
AMER3-204ENST00000458606 SYNJ1O43426 1573 aa31.03■■■□□ 2.56
AMER3-204ENST00000458606 CLASP1Q7Z460 1538 aa30.97■■■□□ 2.55
AMER3-204ENST00000458606 ARAP1Q96P48 1450 aa30.9■■■□□ 2.54
AMER3-204ENST00000458606 CYB5RLQ6IPT4 315 aa30.89■■■□□ 2.54
AMER3-204ENST00000458606 ADAMTS12P58397 1594 aa30.8■■■□□ 2.52
AMER3-204ENST00000458606 GRIN2AQ12879 1464 aa30.76■■■□□ 2.52
AMER3-204ENST00000458606 ERICH3Q5RHP9 1530 aa30.73■■■□□ 2.51
AMER3-204ENST00000458606 FHAD1B1AJZ9 1412 aa30.72■■■□□ 2.51
AMER3-204ENST00000458606 NUP160Q12769 1436 aa30.65■■■□□ 2.5
AMER3-204ENST00000458606 CEP170Q5SW79 1584 aa30.65■■■□□ 2.5
AMER3-204ENST00000458606 ERCC6L2Q5T890 1561 aa30.5■■■□□ 2.47
AMER3-204ENST00000458606 SHROOM2Q13796 1616 aa30.47■■■□□ 2.47
AMER3-204ENST00000458606 KIF27Q86VH2 1401 aa30.46■■■□□ 2.47
AMER3-204ENST00000458606 TRHP20396 242 aaPredicted RBP30.45■■■□□ 2.47
AMER3-204ENST00000458606 IGF1RP08069 1367 aa30.39■■■□□ 2.45
AMER3-204ENST00000458606 RUSC2Q8N2Y8 1516 aa30.37■■■□□ 2.45
AMER3-204ENST00000458606 CUL7Q14999 1698 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms