RNA–Protein interactions for RNA: ENST00000458487.1

SMPD2-203, Transcript of sphingomyelin phosphodiesterase 2, humanhuman

TSL 2

Gene SMPD2, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2-203ENST00000458487 NISCHQ9Y2I1 1504 aa27.71■■■□□ 2.03
SMPD2-203ENST00000458487 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
SMPD2-203ENST00000458487 ABCC9O60706 1549 aa24.3■■□□□ 1.48
SMPD2-203ENST00000458487 RB1CC1Q8TDY2 1594 aa23.33■■□□□ 1.33
SMPD2-203ENST00000458487 NACADO15069 1562 aa23.27■■□□□ 1.32
SMPD2-203ENST00000458487 DCAF8L2P0C7V8 631 aa23.27■■□□□ 1.32
SMPD2-203ENST00000458487 MYO15BQ96JP2 1530 aa23.1■■□□□ 1.29
SMPD2-203ENST00000458487 ZCCHC6Q5VYS8 1495 aaKnown RBP23.04■■□□□ 1.28
SMPD2-203ENST00000458487 DCAF1Q9Y4B6 1507 aa22.93■■□□□ 1.26
SMPD2-203ENST00000458487 UNC13AQ9UPW8 1703 aa22.72■■□□□ 1.23
SMPD2-203ENST00000458487 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.22
SMPD2-203ENST00000458487 BICRAQ9NZM4 1560 aa22.57■■□□□ 1.2
SMPD2-203ENST00000458487 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
SMPD2-203ENST00000458487 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
SMPD2-203ENST00000458487 SHROOM4Q9ULL8 1493 aa22.4■■□□□ 1.18
SMPD2-203ENST00000458487 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
SMPD2-203ENST00000458487 CC2D2AQ9P2K1 1620 aa21.96■■□□□ 1.11
SMPD2-203ENST00000458487 CECR2Q9BXF3 1484 aa21.87■■□□□ 1.09
SMPD2-203ENST00000458487 SMARCA4P51532 1647 aa21.51■■□□□ 1.03
SMPD2-203ENST00000458487 BAZ1AQ9NRL2 1556 aaPredicted RBP21.5■■□□□ 1.03
SMPD2-203ENST00000458487 NCAPD3P42695 1498 aa21.48■■□□□ 1.03
SMPD2-203ENST00000458487 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.03
SMPD2-203ENST00000458487 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
SMPD2-203ENST00000458487 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
SMPD2-203ENST00000458487 MROH2BQ7Z745 1585 aa21.33■■□□□ 1.01
SMPD2-203ENST00000458487 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
SMPD2-203ENST00000458487 BAZ1BQ9UIG0 1483 aaKnown RBP21.28■■□□□ 1
SMPD2-203ENST00000458487 WIZO95785 1651 aa21.09■□□□□ 0.97
SMPD2-203ENST00000458487 RSF1Q96T23 1441 aaPredicted RBP21.06■□□□□ 0.96
SMPD2-203ENST00000458487 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
SMPD2-203ENST00000458487 NESP48681 1621 aa20.96■□□□□ 0.95
SMPD2-203ENST00000458487 LAMC3Q9Y6N6 1575 aa20.93■□□□□ 0.94
SMPD2-203ENST00000458487 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
SMPD2-203ENST00000458487 CADPSQ9ULU8 1353 aa20.86■□□□□ 0.93
SMPD2-203ENST00000458487 PDS5BQ9NTI5 1447 aa20.83■□□□□ 0.93
SMPD2-203ENST00000458487 CUX2O14529 1486 aa20.81■□□□□ 0.92
SMPD2-203ENST00000458487 KIF21AQ7Z4S6 1674 aa20.69■□□□□ 0.9
SMPD2-203ENST00000458487 CFTRP13569 1480 aa20.69■□□□□ 0.9
SMPD2-203ENST00000458487 THOC2Q8NI27 1593 aaKnown RBP20.66■□□□□ 0.9
SMPD2-203ENST00000458487 CCDC88BA6NC98 1476 aa20.64■□□□□ 0.89
SMPD2-203ENST00000458487 FANCD2Q9BXW9 1451 aa20.6■□□□□ 0.89
SMPD2-203ENST00000458487 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
SMPD2-203ENST00000458487 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
SMPD2-203ENST00000458487 WDR62O43379 1518 aa20.51■□□□□ 0.87
SMPD2-203ENST00000458487 PRDM2Q13029 1718 aa20.47■□□□□ 0.87
SMPD2-203ENST00000458487 SUPT5HO00267 1087 aaKnown RBP20.46■□□□□ 0.87
SMPD2-203ENST00000458487 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
SMPD2-203ENST00000458487 DNAJC5Q9H3Z4 198 aa20.36■□□□□ 0.85
SMPD2-203ENST00000458487 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
SMPD2-203ENST00000458487 TOPBP1Q92547 1522 aa20.24■□□□□ 0.83
SMPD2-203ENST00000458487 DNMBPQ6XZF7 1577 aa20.21■□□□□ 0.83
SMPD2-203ENST00000458487 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
SMPD2-203ENST00000458487 POLA1P09884 1462 aaPredicted RBP20.06■□□□□ 0.8
SMPD2-203ENST00000458487 ZNF608Q9ULD9 1512 aaPredicted RBP20.06■□□□□ 0.8
SMPD2-203ENST00000458487 CUX1P39880 1505 aa20.02■□□□□ 0.79
SMPD2-203ENST00000458487 SOGA1O94964 1423 aa20.02■□□□□ 0.79
SMPD2-203ENST00000458487 TARBP1Q13395 1621 aaKnown RBP20.01■□□□□ 0.79
SMPD2-203ENST00000458487 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
SMPD2-203ENST00000458487 RAD54L2Q9Y4B4 1467 aa19.98■□□□□ 0.79
SMPD2-203ENST00000458487 OSCARQ8IYS5 282 aa19.97■□□□□ 0.79
SMPD2-203ENST00000458487 EIF4G3O43432 1585 aaKnown RBP19.96■□□□□ 0.79
SMPD2-203ENST00000458487 AQRO60306 1485 aaKnown RBP eCLIP19.95■□□□□ 0.78
SMPD2-203ENST00000458487 TDRD9Q8NDG6 1382 aaKnown RBP19.9■□□□□ 0.78
SMPD2-203ENST00000458487 WDR97A6NE52 1622 aa19.89■□□□□ 0.77
SMPD2-203ENST00000458487 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
SMPD2-203ENST00000458487 TOP2BQ02880 1626 aa19.83■□□□□ 0.76
SMPD2-203ENST00000458487 ABCA10Q8WWZ4 1543 aa19.81■□□□□ 0.76
SMPD2-203ENST00000458487 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
SMPD2-203ENST00000458487 FBLN2P98095 1184 aa19.79■□□□□ 0.76
SMPD2-203ENST00000458487 GRIN2BQ13224 1484 aa19.79■□□□□ 0.76
SMPD2-203ENST00000458487 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
SMPD2-203ENST00000458487 GAPVD1Q14C86 1478 aa19.76■□□□□ 0.75
SMPD2-203ENST00000458487 SNAPC4Q5SXM2 1469 aa19.75■□□□□ 0.75
SMPD2-203ENST00000458487 MAGI1Q96QZ7 1491 aaPredicted RBP19.75■□□□□ 0.75
SMPD2-203ENST00000458487 CHD1O14646 1710 aa19.73■□□□□ 0.75
SMPD2-203ENST00000458487 CHMP7Q8WUX9 453 aaPredicted RBP19.72■□□□□ 0.75
SMPD2-203ENST00000458487 ABCA5Q8WWZ7 1642 aa19.7■□□□□ 0.74
SMPD2-203ENST00000458487 PBRM1Q86U86 1689 aa19.68■□□□□ 0.74
SMPD2-203ENST00000458487 SYNJ2O15056 1496 aa19.67■□□□□ 0.74
SMPD2-203ENST00000458487 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
SMPD2-203ENST00000458487 RIMBP3CA6NJZ7 1639 aa19.58■□□□□ 0.73
SMPD2-203ENST00000458487 RIMBP3BA6NNM3 1639 aa19.58■□□□□ 0.73
SMPD2-203ENST00000458487 RIMBP3Q9UFD9 1639 aa19.58■□□□□ 0.73
SMPD2-203ENST00000458487 ARHGEF11O15085 1522 aa19.58■□□□□ 0.73
SMPD2-203ENST00000458487 ERICH3Q5RHP9 1530 aa19.57■□□□□ 0.72
SMPD2-203ENST00000458487 FHAD1B1AJZ9 1412 aa19.54■□□□□ 0.72
SMPD2-203ENST00000458487 ADAMTS12P58397 1594 aa19.53■□□□□ 0.72
SMPD2-203ENST00000458487 CLASP1Q7Z460 1538 aa19.53■□□□□ 0.72
SMPD2-203ENST00000458487 GRIN2AQ12879 1464 aa19.52■□□□□ 0.72
SMPD2-203ENST00000458487 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
SMPD2-203ENST00000458487 CYB5RLQ6IPT4 315 aa19.45■□□□□ 0.7
SMPD2-203ENST00000458487 NUP160Q12769 1436 aa19.43■□□□□ 0.7
SMPD2-203ENST00000458487 IGF1RP08069 1367 aa19.42■□□□□ 0.7
SMPD2-203ENST00000458487 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
SMPD2-203ENST00000458487 CEP170Q5SW79 1584 aa19.39■□□□□ 0.69
SMPD2-203ENST00000458487 CUL7Q14999 1698 aa19.35■□□□□ 0.69
SMPD2-203ENST00000458487 CARMIL1Q5VZK9 1371 aa19.32■□□□□ 0.68
SMPD2-203ENST00000458487 JPH4Q96JJ6 628 aa19.28■□□□□ 0.68
SMPD2-203ENST00000458487 SHROOM2Q13796 1616 aa19.28■□□□□ 0.68
SMPD2-203ENST00000458487 RUSC2Q8N2Y8 1516 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms