RNA–Protein interactions for RNA: ENST00000458447.5

APOD-204, Transcript of apolipoprotein D, humanhuman

TSL 2

Gene APOD, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOD-204ENST00000458447 NISCHQ9Y2I1 1504 aa29.98■■■□□ 2.39
APOD-204ENST00000458447 CCDC180Q9P1Z9 1646 aa26.58■■□□□ 1.85
APOD-204ENST00000458447 ABCC9O60706 1549 aa26.19■■□□□ 1.78
APOD-204ENST00000458447 AEBP2Q6ZN18 517 aaPredicted RBP25.98■■□□□ 1.75
APOD-204ENST00000458447 DCAF8L2P0C7V8 631 aa25.22■■□□□ 1.63
APOD-204ENST00000458447 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
APOD-204ENST00000458447 RB1CC1Q8TDY2 1594 aa25.07■■□□□ 1.6
APOD-204ENST00000458447 NACADO15069 1562 aa25.01■■□□□ 1.59
APOD-204ENST00000458447 ZCCHC6Q5VYS8 1495 aaKnown RBP24.98■■□□□ 1.59
APOD-204ENST00000458447 MYO15BQ96JP2 1530 aa24.79■■□□□ 1.56
APOD-204ENST00000458447 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
APOD-204ENST00000458447 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
APOD-204ENST00000458447 UNC13AQ9UPW8 1703 aa24.47■■□□□ 1.51
APOD-204ENST00000458447 SCRIBQ14160 1630 aa24.42■■□□□ 1.5
APOD-204ENST00000458447 BICRAQ9NZM4 1560 aa24.33■■□□□ 1.48
APOD-204ENST00000458447 DNAJC5BQ9UF47 199 aa24.02■■□□□ 1.44
APOD-204ENST00000458447 SHROOM4Q9ULL8 1493 aa23.96■■□□□ 1.43
APOD-204ENST00000458447 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
APOD-204ENST00000458447 CC2D2AQ9P2K1 1620 aa23.61■■□□□ 1.37
APOD-204ENST00000458447 CECR2Q9BXF3 1484 aa23.48■■□□□ 1.35
APOD-204ENST00000458447 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
APOD-204ENST00000458447 BAZ1AQ9NRL2 1556 aaPredicted RBP23.23■■□□□ 1.31
APOD-204ENST00000458447 MROH2BQ7Z745 1585 aa23.15■■□□□ 1.3
APOD-204ENST00000458447 ATAD2BQ9ULI0 1458 aa23.15■■□□□ 1.3
APOD-204ENST00000458447 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
APOD-204ENST00000458447 SMARCA2P51531 1590 aa23.09■■□□□ 1.29
APOD-204ENST00000458447 BAZ1BQ9UIG0 1483 aaKnown RBP22.99■■□□□ 1.27
APOD-204ENST00000458447 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
APOD-204ENST00000458447 PEG3Q9GZU2 1588 aa22.96■■□□□ 1.27
APOD-204ENST00000458447 WIZO95785 1651 aa22.9■■□□□ 1.26
APOD-204ENST00000458447 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
APOD-204ENST00000458447 NESP48681 1621 aa22.65■■□□□ 1.22
APOD-204ENST00000458447 TOP2AP11388 1531 aaKnown RBP22.63■■□□□ 1.21
APOD-204ENST00000458447 ERCC6Q03468 1493 aa22.55■■□□□ 1.2
APOD-204ENST00000458447 LAMC3Q9Y6N6 1575 aa22.48■■□□□ 1.19
APOD-204ENST00000458447 CADPSQ9ULU8 1353 aa22.46■■□□□ 1.19
APOD-204ENST00000458447 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
APOD-204ENST00000458447 CCDC88BA6NC98 1476 aa22.39■■□□□ 1.17
APOD-204ENST00000458447 PDS5BQ9NTI5 1447 aa22.36■■□□□ 1.17
APOD-204ENST00000458447 KIF21AQ7Z4S6 1674 aa22.32■■□□□ 1.16
APOD-204ENST00000458447 CFTRP13569 1480 aa22.3■■□□□ 1.16
APOD-204ENST00000458447 FANCD2Q9BXW9 1451 aa22.23■■□□□ 1.15
APOD-204ENST00000458447 THOC2Q8NI27 1593 aaKnown RBP22.23■■□□□ 1.15
APOD-204ENST00000458447 CUX2O14529 1486 aa22.21■■□□□ 1.15
APOD-204ENST00000458447 PHF23Q9BUL5 403 aaPredicted RBP22.2■■□□□ 1.14
APOD-204ENST00000458447 CEP164Q9UPV0 1460 aa22.2■■□□□ 1.14
APOD-204ENST00000458447 MRC2Q9UBG0 1479 aa22.16■■□□□ 1.14
APOD-204ENST00000458447 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
APOD-204ENST00000458447 WDR62O43379 1518 aa22.06■■□□□ 1.12
APOD-204ENST00000458447 URB2Q14146 1524 aaKnown RBP22.02■■□□□ 1.12
APOD-204ENST00000458447 SENP3Q9H4L4 574 aaPredicted RBP22.01■■□□□ 1.11
APOD-204ENST00000458447 TOPBP1Q92547 1522 aa21.87■■□□□ 1.09
APOD-204ENST00000458447 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
APOD-204ENST00000458447 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
APOD-204ENST00000458447 CUX1P39880 1505 aa21.72■■□□□ 1.07
APOD-204ENST00000458447 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
APOD-204ENST00000458447 POLA1P09884 1462 aaPredicted RBP21.68■■□□□ 1.06
APOD-204ENST00000458447 ZNF608Q9ULD9 1512 aaPredicted RBP21.67■■□□□ 1.06
APOD-204ENST00000458447 FGD5Q6ZNL6 1462 aa21.66■■□□□ 1.06
APOD-204ENST00000458447 RAD54L2Q9Y4B4 1467 aa21.64■■□□□ 1.06
APOD-204ENST00000458447 SOGA1O94964 1423 aa21.6■■□□□ 1.05
APOD-204ENST00000458447 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.05
APOD-204ENST00000458447 WRNQ14191 1432 aaPredicted RBP eCLIP21.58■■□□□ 1.05
APOD-204ENST00000458447 AQRO60306 1485 aaKnown RBP eCLIP21.56■■□□□ 1.04
APOD-204ENST00000458447 EIF4G3O43432 1585 aaKnown RBP21.56■■□□□ 1.04
APOD-204ENST00000458447 DNAJC5Q9H3Z4 198 aa21.55■■□□□ 1.04
APOD-204ENST00000458447 SYNJ1O43426 1573 aa21.54■■□□□ 1.04
APOD-204ENST00000458447 TDRD9Q8NDG6 1382 aaKnown RBP21.53■■□□□ 1.04
APOD-204ENST00000458447 TOP2BQ02880 1626 aa21.48■■□□□ 1.03
APOD-204ENST00000458447 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
APOD-204ENST00000458447 WDR97A6NE52 1622 aa21.4■■□□□ 1.02
APOD-204ENST00000458447 ABCA10Q8WWZ4 1543 aa21.39■■□□□ 1.01
APOD-204ENST00000458447 FBLN2P98095 1184 aa21.36■■□□□ 1.01
APOD-204ENST00000458447 SNAPC4Q5SXM2 1469 aa21.36■■□□□ 1.01
APOD-204ENST00000458447 GAPVD1Q14C86 1478 aa21.34■■□□□ 1.01
APOD-204ENST00000458447 OSCARQ8IYS5 282 aa21.34■■□□□ 1.01
APOD-204ENST00000458447 GRIN2BQ13224 1484 aa21.33■■□□□ 1.01
APOD-204ENST00000458447 ABCA5Q8WWZ7 1642 aa21.31■■□□□ 1
APOD-204ENST00000458447 PBRM1Q86U86 1689 aa21.28■■□□□ 1
APOD-204ENST00000458447 CHD1O14646 1710 aa21.26■□□□□ 0.99
APOD-204ENST00000458447 MAGI1Q96QZ7 1491 aaPredicted RBP21.26■□□□□ 0.99
APOD-204ENST00000458447 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
APOD-204ENST00000458447 SYNJ2O15056 1496 aa21.19■□□□□ 0.98
APOD-204ENST00000458447 ADAMTS12P58397 1594 aa21.14■□□□□ 0.97
APOD-204ENST00000458447 TRIM41Q8WV44 630 aa21.12■□□□□ 0.97
APOD-204ENST00000458447 KIF27Q86VH2 1401 aa21.12■□□□□ 0.97
APOD-204ENST00000458447 ERICH3Q5RHP9 1530 aa21.11■□□□□ 0.97
APOD-204ENST00000458447 FHAD1B1AJZ9 1412 aa21.09■□□□□ 0.97
APOD-204ENST00000458447 GRIN2AQ12879 1464 aa21.07■□□□□ 0.96
APOD-204ENST00000458447 IGF1RP08069 1367 aa21.02■□□□□ 0.96
APOD-204ENST00000458447 CLASP1Q7Z460 1538 aa21.02■□□□□ 0.96
APOD-204ENST00000458447 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
APOD-204ENST00000458447 RIMBP3BA6NNM3 1639 aa21■□□□□ 0.95
APOD-204ENST00000458447 RIMBP3Q9UFD9 1639 aa21■□□□□ 0.95
APOD-204ENST00000458447 ARHGEF11O15085 1522 aa21■□□□□ 0.95
APOD-204ENST00000458447 RUSC2Q8N2Y8 1516 aa20.99■□□□□ 0.95
APOD-204ENST00000458447 CEP170Q5SW79 1584 aa20.97■□□□□ 0.95
APOD-204ENST00000458447 NUP160Q12769 1436 aa20.95■□□□□ 0.94
APOD-204ENST00000458447 CUL7Q14999 1698 aa20.93■□□□□ 0.94
APOD-204ENST00000458447 CARMIL1Q5VZK9 1371 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms