RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 NISCHQ9Y2I1 1504 aa32.61■■■□□ 2.81
COMMD1-206ENST00000458337 CCDC180Q9P1Z9 1646 aa28.99■■■□□ 2.23
COMMD1-206ENST00000458337 ABCC9O60706 1549 aa28.48■■■□□ 2.15
COMMD1-206ENST00000458337 RB1CC1Q8TDY2 1594 aa27.36■■□□□ 1.97
COMMD1-206ENST00000458337 NACADO15069 1562 aa27.34■■□□□ 1.97
COMMD1-206ENST00000458337 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
COMMD1-206ENST00000458337 MYO15BQ96JP2 1530 aa27.19■■□□□ 1.94
COMMD1-206ENST00000458337 ZCCHC6Q5VYS8 1495 aaKnown RBP27.11■■□□□ 1.93
COMMD1-206ENST00000458337 DCAF1Q9Y4B6 1507 aa27.01■■□□□ 1.91
COMMD1-206ENST00000458337 UNC13AQ9UPW8 1703 aa26.72■■□□□ 1.87
COMMD1-206ENST00000458337 PABPN1Q86U42 306 aaKnown RBP eCLIP26.64■■□□□ 1.86
COMMD1-206ENST00000458337 BICRAQ9NZM4 1560 aa26.57■■□□□ 1.84
COMMD1-206ENST00000458337 SCRIBQ14160 1630 aa26.39■■□□□ 1.82
COMMD1-206ENST00000458337 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
COMMD1-206ENST00000458337 SHROOM4Q9ULL8 1493 aa26.29■■□□□ 1.8
COMMD1-206ENST00000458337 EIF4G1Q04637 1599 aaKnown RBP25.85■■□□□ 1.73
COMMD1-206ENST00000458337 CC2D2AQ9P2K1 1620 aa25.77■■□□□ 1.72
COMMD1-206ENST00000458337 CECR2Q9BXF3 1484 aa25.63■■□□□ 1.69
COMMD1-206ENST00000458337 SMARCA4P51532 1647 aa25.29■■□□□ 1.64
COMMD1-206ENST00000458337 NCAPD3P42695 1498 aa25.27■■□□□ 1.64
COMMD1-206ENST00000458337 BAZ1AQ9NRL2 1556 aaPredicted RBP25.26■■□□□ 1.63
COMMD1-206ENST00000458337 ATAD2BQ9ULI0 1458 aa25.22■■□□□ 1.63
COMMD1-206ENST00000458337 SMARCA2P51531 1590 aa25.16■■□□□ 1.62
COMMD1-206ENST00000458337 MROH2BQ7Z745 1585 aa25.12■■□□□ 1.61
COMMD1-206ENST00000458337 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
COMMD1-206ENST00000458337 HMGXB3Q12766 1538 aa25.07■■□□□ 1.6
COMMD1-206ENST00000458337 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
COMMD1-206ENST00000458337 RSF1Q96T23 1441 aaPredicted RBP24.82■■□□□ 1.56
COMMD1-206ENST00000458337 WIZO95785 1651 aa24.81■■□□□ 1.56
COMMD1-206ENST00000458337 NESP48681 1621 aa24.63■■□□□ 1.53
COMMD1-206ENST00000458337 LAMC3Q9Y6N6 1575 aa24.55■■□□□ 1.52
COMMD1-206ENST00000458337 TOP2AP11388 1531 aaKnown RBP24.54■■□□□ 1.52
COMMD1-206ENST00000458337 ERCC6Q03468 1493 aa24.53■■□□□ 1.52
COMMD1-206ENST00000458337 CADPSQ9ULU8 1353 aa24.52■■□□□ 1.52
COMMD1-206ENST00000458337 PDS5BQ9NTI5 1447 aa24.43■■□□□ 1.5
COMMD1-206ENST00000458337 CUX2O14529 1486 aa24.38■■□□□ 1.49
COMMD1-206ENST00000458337 CFTRP13569 1480 aa24.33■■□□□ 1.49
COMMD1-206ENST00000458337 CCDC88BA6NC98 1476 aa24.31■■□□□ 1.48
COMMD1-206ENST00000458337 KIF21AQ7Z4S6 1674 aa24.29■■□□□ 1.48
COMMD1-206ENST00000458337 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
COMMD1-206ENST00000458337 FANCD2Q9BXW9 1451 aa24.18■■□□□ 1.46
COMMD1-206ENST00000458337 MRC2Q9UBG0 1479 aa24.14■■□□□ 1.46
COMMD1-206ENST00000458337 CEP164Q9UPV0 1460 aa24.13■■□□□ 1.45
COMMD1-206ENST00000458337 WDR62O43379 1518 aa24.06■■□□□ 1.44
COMMD1-206ENST00000458337 SUPT5HO00267 1087 aaKnown RBP24.06■■□□□ 1.44
COMMD1-206ENST00000458337 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
COMMD1-206ENST00000458337 URB2Q14146 1524 aaKnown RBP23.95■■□□□ 1.43
COMMD1-206ENST00000458337 DNAJC5Q9H3Z4 198 aa23.86■■□□□ 1.41
COMMD1-206ENST00000458337 ABCC8Q09428 1581 aa23.82■■□□□ 1.4
COMMD1-206ENST00000458337 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
COMMD1-206ENST00000458337 DNMBPQ6XZF7 1577 aa23.73■■□□□ 1.39
COMMD1-206ENST00000458337 IFT140Q96RY7 1462 aa23.67■■□□□ 1.38
COMMD1-206ENST00000458337 POLA1P09884 1462 aaPredicted RBP23.57■■□□□ 1.36
COMMD1-206ENST00000458337 ZNF608Q9ULD9 1512 aaPredicted RBP23.57■■□□□ 1.36
COMMD1-206ENST00000458337 CUX1P39880 1505 aa23.56■■□□□ 1.36
COMMD1-206ENST00000458337 TARBP1Q13395 1621 aaKnown RBP23.54■■□□□ 1.36
COMMD1-206ENST00000458337 SOGA1O94964 1423 aa23.5■■□□□ 1.35
COMMD1-206ENST00000458337 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
COMMD1-206ENST00000458337 RAD54L2Q9Y4B4 1467 aa23.48■■□□□ 1.35
COMMD1-206ENST00000458337 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.34
COMMD1-206ENST00000458337 EIF4G3O43432 1585 aaKnown RBP23.41■■□□□ 1.34
COMMD1-206ENST00000458337 OSCARQ8IYS5 282 aa23.41■■□□□ 1.34
COMMD1-206ENST00000458337 TDRD9Q8NDG6 1382 aaKnown RBP23.39■■□□□ 1.33
COMMD1-206ENST00000458337 WRNQ14191 1432 aaPredicted RBP eCLIP23.37■■□□□ 1.33
COMMD1-206ENST00000458337 WDR97A6NE52 1622 aa23.34■■□□□ 1.33
COMMD1-206ENST00000458337 TOP2BQ02880 1626 aa23.33■■□□□ 1.32
COMMD1-206ENST00000458337 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
COMMD1-206ENST00000458337 SYNJ1O43426 1573 aa23.29■■□□□ 1.32
COMMD1-206ENST00000458337 ABCA10Q8WWZ4 1543 aa23.28■■□□□ 1.32
COMMD1-206ENST00000458337 GRIN2BQ13224 1484 aa23.23■■□□□ 1.31
COMMD1-206ENST00000458337 GAPVD1Q14C86 1478 aa23.21■■□□□ 1.31
COMMD1-206ENST00000458337 MAGI1Q96QZ7 1491 aaPredicted RBP23.17■■□□□ 1.3
COMMD1-206ENST00000458337 SNAPC4Q5SXM2 1469 aa23.17■■□□□ 1.3
COMMD1-206ENST00000458337 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
COMMD1-206ENST00000458337 FBLN2P98095 1184 aa23.15■■□□□ 1.3
COMMD1-206ENST00000458337 CHD1O14646 1710 aa23.13■■□□□ 1.29
COMMD1-206ENST00000458337 CHMP7Q8WUX9 453 aaPredicted RBP23.11■■□□□ 1.29
COMMD1-206ENST00000458337 PBRM1Q86U86 1689 aa23.09■■□□□ 1.29
COMMD1-206ENST00000458337 SYNJ2O15056 1496 aa23.08■■□□□ 1.29
COMMD1-206ENST00000458337 ERICH3Q5RHP9 1530 aa22.99■■□□□ 1.27
COMMD1-206ENST00000458337 FHAD1B1AJZ9 1412 aa22.95■■□□□ 1.26
COMMD1-206ENST00000458337 RIMBP3CA6NJZ7 1639 aa22.94■■□□□ 1.26
COMMD1-206ENST00000458337 RIMBP3BA6NNM3 1639 aa22.94■■□□□ 1.26
COMMD1-206ENST00000458337 RIMBP3Q9UFD9 1639 aa22.94■■□□□ 1.26
COMMD1-206ENST00000458337 ARHGEF11O15085 1522 aa22.94■■□□□ 1.26
COMMD1-206ENST00000458337 CLASP1Q7Z460 1538 aa22.93■■□□□ 1.26
COMMD1-206ENST00000458337 ADAMTS12P58397 1594 aa22.93■■□□□ 1.26
COMMD1-206ENST00000458337 GRIN2AQ12879 1464 aa22.91■■□□□ 1.26
COMMD1-206ENST00000458337 KIF27Q86VH2 1401 aa22.9■■□□□ 1.26
COMMD1-206ENST00000458337 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
COMMD1-206ENST00000458337 IGF1RP08069 1367 aa22.89■■□□□ 1.25
COMMD1-206ENST00000458337 NUP160Q12769 1436 aa22.84■■□□□ 1.25
COMMD1-206ENST00000458337 CYB5RLQ6IPT4 315 aa22.79■■□□□ 1.24
COMMD1-206ENST00000458337 CEP170Q5SW79 1584 aa22.78■■□□□ 1.24
COMMD1-206ENST00000458337 ARAP1Q96P48 1450 aa22.76■■□□□ 1.23
COMMD1-206ENST00000458337 CUL7Q14999 1698 aa22.72■■□□□ 1.23
COMMD1-206ENST00000458337 CARMIL1Q5VZK9 1371 aa22.71■■□□□ 1.23
COMMD1-206ENST00000458337 SHROOM2Q13796 1616 aa22.67■■□□□ 1.22
COMMD1-206ENST00000458337 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
COMMD1-206ENST00000458337 JPH4Q96JJ6 628 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms