RNA–Protein interactions for RNA: ENST00000458223.5

CBS-208, Transcript of cystathionine-beta-synthase, humanhuman

TSL 3

Gene CBS, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBS-208ENST00000458223 NISCHQ9Y2I1 1504 aa22.33■■□□□ 1.17
CBS-208ENST00000458223 CCDC180Q9P1Z9 1646 aa19.93■□□□□ 0.78
CBS-208ENST00000458223 ABCC9O60706 1549 aa19.73■□□□□ 0.75
CBS-208ENST00000458223 RB1CC1Q8TDY2 1594 aa18.84■□□□□ 0.61
CBS-208ENST00000458223 DCAF8L2P0C7V8 631 aa18.83■□□□□ 0.6
CBS-208ENST00000458223 NACADO15069 1562 aa18.74■□□□□ 0.59
CBS-208ENST00000458223 ZCCHC6Q5VYS8 1495 aaKnown RBP18.57■□□□□ 0.56
CBS-208ENST00000458223 UNC13AQ9UPW8 1703 aa18.52■□□□□ 0.56
CBS-208ENST00000458223 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
CBS-208ENST00000458223 PABPN1Q86U42 306 aaKnown RBP eCLIP18.42■□□□□ 0.54
CBS-208ENST00000458223 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.53
CBS-208ENST00000458223 BICRAQ9NZM4 1560 aa18.31■□□□□ 0.52
CBS-208ENST00000458223 SCRIBQ14160 1630 aa18.27■□□□□ 0.52
CBS-208ENST00000458223 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
CBS-208ENST00000458223 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
CBS-208ENST00000458223 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.44
CBS-208ENST00000458223 CC2D2AQ9P2K1 1620 aa17.82■□□□□ 0.44
CBS-208ENST00000458223 CECR2Q9BXF3 1484 aa17.7■□□□□ 0.42
CBS-208ENST00000458223 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
CBS-208ENST00000458223 BAZ1AQ9NRL2 1556 aaPredicted RBP17.31■□□□□ 0.36
CBS-208ENST00000458223 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
CBS-208ENST00000458223 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
CBS-208ENST00000458223 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
CBS-208ENST00000458223 MROH2BQ7Z745 1585 aa17.26■□□□□ 0.35
CBS-208ENST00000458223 HMGXB3Q12766 1538 aa17.21■□□□□ 0.34
CBS-208ENST00000458223 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
CBS-208ENST00000458223 PEG3Q9GZU2 1588 aa17.15■□□□□ 0.34
CBS-208ENST00000458223 WIZO95785 1651 aa17.11■□□□□ 0.33
CBS-208ENST00000458223 NESP48681 1621 aa17.05■□□□□ 0.32
CBS-208ENST00000458223 ERCC6Q03468 1493 aa16.99■□□□□ 0.31
CBS-208ENST00000458223 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
CBS-208ENST00000458223 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
CBS-208ENST00000458223 KIF21AQ7Z4S6 1674 aa16.86■□□□□ 0.29
CBS-208ENST00000458223 TOP2AP11388 1531 aaKnown RBP16.85■□□□□ 0.29
CBS-208ENST00000458223 CUX2O14529 1486 aa16.8■□□□□ 0.28
CBS-208ENST00000458223 THOC2Q8NI27 1593 aaKnown RBP16.79■□□□□ 0.28
CBS-208ENST00000458223 CADPSQ9ULU8 1353 aa16.78■□□□□ 0.28
CBS-208ENST00000458223 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
CBS-208ENST00000458223 CCDC88BA6NC98 1476 aa16.66■□□□□ 0.26
CBS-208ENST00000458223 CFTRP13569 1480 aa16.65■□□□□ 0.26
CBS-208ENST00000458223 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
CBS-208ENST00000458223 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
CBS-208ENST00000458223 CEP164Q9UPV0 1460 aa16.63■□□□□ 0.25
CBS-208ENST00000458223 PRDM2Q13029 1718 aa16.6■□□□□ 0.25
CBS-208ENST00000458223 WDR62O43379 1518 aa16.58■□□□□ 0.24
CBS-208ENST00000458223 URB2Q14146 1524 aaKnown RBP16.5■□□□□ 0.23
CBS-208ENST00000458223 SUPT5HO00267 1087 aaKnown RBP16.5■□□□□ 0.23
CBS-208ENST00000458223 DNAJC5Q9H3Z4 198 aa16.47■□□□□ 0.23
CBS-208ENST00000458223 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
CBS-208ENST00000458223 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
CBS-208ENST00000458223 ZNF608Q9ULD9 1512 aaPredicted RBP16.27■□□□□ 0.2
CBS-208ENST00000458223 IFT140Q96RY7 1462 aa16.26■□□□□ 0.19
CBS-208ENST00000458223 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
CBS-208ENST00000458223 POLA1P09884 1462 aaPredicted RBP16.21■□□□□ 0.19
CBS-208ENST00000458223 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.18
CBS-208ENST00000458223 CUX1P39880 1505 aa16.2■□□□□ 0.18
CBS-208ENST00000458223 TARBP1Q13395 1621 aaKnown RBP16.2■□□□□ 0.18
CBS-208ENST00000458223 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
CBS-208ENST00000458223 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
CBS-208ENST00000458223 AQRO60306 1485 aaKnown RBP eCLIP16.15■□□□□ 0.18
CBS-208ENST00000458223 SOGA1O94964 1423 aa16.12■□□□□ 0.17
CBS-208ENST00000458223 TDRD9Q8NDG6 1382 aaKnown RBP16.09■□□□□ 0.17
CBS-208ENST00000458223 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
CBS-208ENST00000458223 CHD1O14646 1710 aa16.08■□□□□ 0.16
CBS-208ENST00000458223 WDR97A6NE52 1622 aa16.06■□□□□ 0.16
CBS-208ENST00000458223 SYNJ1O43426 1573 aa16.04■□□□□ 0.16
CBS-208ENST00000458223 FBLN2P98095 1184 aa16.01■□□□□ 0.15
CBS-208ENST00000458223 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
CBS-208ENST00000458223 PBRM1Q86U86 1689 aa16■□□□□ 0.15
CBS-208ENST00000458223 SNAPC4Q5SXM2 1469 aa16■□□□□ 0.15
CBS-208ENST00000458223 WRNQ14191 1432 aaPredicted RBP eCLIP16■□□□□ 0.15
CBS-208ENST00000458223 TOP2BQ02880 1626 aa15.99■□□□□ 0.15
CBS-208ENST00000458223 TRIM41Q8WV44 630 aa15.99■□□□□ 0.15
CBS-208ENST00000458223 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
CBS-208ENST00000458223 ABCA5Q8WWZ7 1642 aa15.94■□□□□ 0.14
CBS-208ENST00000458223 GRIN2BQ13224 1484 aa15.94■□□□□ 0.14
CBS-208ENST00000458223 GAPVD1Q14C86 1478 aa15.94■□□□□ 0.14
CBS-208ENST00000458223 RIMBP3CA6NJZ7 1639 aa15.93■□□□□ 0.14
CBS-208ENST00000458223 RIMBP3BA6NNM3 1639 aa15.93■□□□□ 0.14
CBS-208ENST00000458223 RIMBP3Q9UFD9 1639 aa15.93■□□□□ 0.14
CBS-208ENST00000458223 MAGI1Q96QZ7 1491 aaPredicted RBP15.9■□□□□ 0.14
CBS-208ENST00000458223 ARHGEF11O15085 1522 aa15.88■□□□□ 0.13
CBS-208ENST00000458223 CHMP7Q8WUX9 453 aaPredicted RBP15.87■□□□□ 0.13
CBS-208ENST00000458223 SYNJ2O15056 1496 aa15.85■□□□□ 0.13
CBS-208ENST00000458223 ADAMTS12P58397 1594 aa15.82■□□□□ 0.12
CBS-208ENST00000458223 CLASP1Q7Z460 1538 aa15.81■□□□□ 0.12
CBS-208ENST00000458223 GRIN2AQ12879 1464 aa15.76■□□□□ 0.11
CBS-208ENST00000458223 ERICH3Q5RHP9 1530 aa15.74■□□□□ 0.11
CBS-208ENST00000458223 ARAP1Q96P48 1450 aa15.74■□□□□ 0.11
CBS-208ENST00000458223 CYB5RLQ6IPT4 315 aa15.74■□□□□ 0.11
CBS-208ENST00000458223 CEP170Q5SW79 1584 aa15.73■□□□□ 0.11
CBS-208ENST00000458223 FHAD1B1AJZ9 1412 aa15.72■□□□□ 0.11
CBS-208ENST00000458223 NUP160Q12769 1436 aa15.67■□□□□ 0.1
CBS-208ENST00000458223 ERCC6L2Q5T890 1561 aa15.66■□□□□ 0.1
CBS-208ENST00000458223 KIF27Q86VH2 1401 aa15.66■□□□□ 0.1
CBS-208ENST00000458223 IGF1RP08069 1367 aa15.61■□□□□ 0.09
CBS-208ENST00000458223 CUL7Q14999 1698 aa15.6■□□□□ 0.09
CBS-208ENST00000458223 SHROOM2Q13796 1616 aa15.6■□□□□ 0.09
CBS-208ENST00000458223 RUSC2Q8N2Y8 1516 aa15.58■□□□□ 0.09
CBS-208ENST00000458223 CARMIL1Q5VZK9 1371 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms