RNA–Protein interactions for RNA: ENST00000458153.5

MKLN1-206, Transcript of muskelin 1, humanhuman

TSL 2

Gene MKLN1, Length 2,448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKLN1-206ENST00000458153 NISCHQ9Y2I1 1504 aa23.57■■□□□ 1.36
MKLN1-206ENST00000458153 ABCC9O60706 1549 aa21.56■■□□□ 1.04
MKLN1-206ENST00000458153 CCDC180Q9P1Z9 1646 aa21.49■■□□□ 1.03
MKLN1-206ENST00000458153 RB1CC1Q8TDY2 1594 aa20.54■□□□□ 0.88
MKLN1-206ENST00000458153 DNAJC5BQ9UF47 199 aa20.46■□□□□ 0.87
MKLN1-206ENST00000458153 NACADO15069 1562 aa20.32■□□□□ 0.84
MKLN1-206ENST00000458153 UNC13AQ9UPW8 1703 aa20.09■□□□□ 0.81
MKLN1-206ENST00000458153 MYO15BQ96JP2 1530 aa19.99■□□□□ 0.79
MKLN1-206ENST00000458153 BICRAQ9NZM4 1560 aa19.92■□□□□ 0.78
MKLN1-206ENST00000458153 PABPN1Q86U42 306 aaKnown RBP eCLIP19.89■□□□□ 0.77
MKLN1-206ENST00000458153 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
MKLN1-206ENST00000458153 DCAF8L2P0C7V8 631 aa19.7■□□□□ 0.74
MKLN1-206ENST00000458153 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
MKLN1-206ENST00000458153 CC2D2AQ9P2K1 1620 aa19.57■□□□□ 0.72
MKLN1-206ENST00000458153 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.72
MKLN1-206ENST00000458153 ZCCHC6Q5VYS8 1495 aaKnown RBP19.49■□□□□ 0.71
MKLN1-206ENST00000458153 EIF4G1Q04637 1599 aaKnown RBP19.45■□□□□ 0.7
MKLN1-206ENST00000458153 SCRIBQ14160 1630 aa19.35■□□□□ 0.69
MKLN1-206ENST00000458153 DNAJC5Q9H3Z4 198 aa19.17■□□□□ 0.66
MKLN1-206ENST00000458153 CUX2O14529 1486 aa18.92■□□□□ 0.62
MKLN1-206ENST00000458153 NCAPD3P42695 1498 aa18.7■□□□□ 0.58
MKLN1-206ENST00000458153 ERCC6Q03468 1493 aa18.69■□□□□ 0.58
MKLN1-206ENST00000458153 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
MKLN1-206ENST00000458153 SMARCA2P51531 1590 aa18.57■□□□□ 0.56
MKLN1-206ENST00000458153 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
MKLN1-206ENST00000458153 SMARCA4P51532 1647 aa18.5■□□□□ 0.55
MKLN1-206ENST00000458153 THOC2Q8NI27 1593 aaKnown RBP18.48■□□□□ 0.55
MKLN1-206ENST00000458153 NESP48681 1621 aa18.42■□□□□ 0.54
MKLN1-206ENST00000458153 PEG3Q9GZU2 1588 aa18.4■□□□□ 0.54
MKLN1-206ENST00000458153 LAMC3Q9Y6N6 1575 aa18.4■□□□□ 0.54
MKLN1-206ENST00000458153 BAZ1BQ9UIG0 1483 aaKnown RBP18.36■□□□□ 0.53
MKLN1-206ENST00000458153 BAZ1AQ9NRL2 1556 aaPredicted RBP18.35■□□□□ 0.53
MKLN1-206ENST00000458153 KIF21AQ7Z4S6 1674 aa18.29■□□□□ 0.52
MKLN1-206ENST00000458153 PDS5BQ9NTI5 1447 aa18.22■□□□□ 0.51
MKLN1-206ENST00000458153 WDR62O43379 1518 aa18.14■□□□□ 0.49
MKLN1-206ENST00000458153 MRC2Q9UBG0 1479 aa18.13■□□□□ 0.49
MKLN1-206ENST00000458153 MROH2BQ7Z745 1585 aa18.09■□□□□ 0.49
MKLN1-206ENST00000458153 CADPSQ9ULU8 1353 aa18.05■□□□□ 0.48
MKLN1-206ENST00000458153 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
MKLN1-206ENST00000458153 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
MKLN1-206ENST00000458153 WIZO95785 1651 aa17.87■□□□□ 0.45
MKLN1-206ENST00000458153 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
MKLN1-206ENST00000458153 CFTRP13569 1480 aa17.82■□□□□ 0.44
MKLN1-206ENST00000458153 OSCARQ8IYS5 282 aa17.8■□□□□ 0.44
MKLN1-206ENST00000458153 PRDM2Q13029 1718 aa17.79■□□□□ 0.44
MKLN1-206ENST00000458153 URB2Q14146 1524 aaKnown RBP17.75■□□□□ 0.43
MKLN1-206ENST00000458153 RIMBP3CA6NJZ7 1639 aa17.75■□□□□ 0.43
MKLN1-206ENST00000458153 RIMBP3BA6NNM3 1639 aa17.75■□□□□ 0.43
MKLN1-206ENST00000458153 RIMBP3Q9UFD9 1639 aa17.75■□□□□ 0.43
MKLN1-206ENST00000458153 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
MKLN1-206ENST00000458153 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
MKLN1-206ENST00000458153 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
MKLN1-206ENST00000458153 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
MKLN1-206ENST00000458153 ZNF608Q9ULD9 1512 aaPredicted RBP17.53■□□□□ 0.4
MKLN1-206ENST00000458153 EIF4G3O43432 1585 aaKnown RBP17.53■□□□□ 0.4
MKLN1-206ENST00000458153 ABCC8Q09428 1581 aa17.51■□□□□ 0.39
MKLN1-206ENST00000458153 TOPBP1Q92547 1522 aa17.51■□□□□ 0.39
MKLN1-206ENST00000458153 CHD1O14646 1710 aa17.49■□□□□ 0.39
MKLN1-206ENST00000458153 DNMBPQ6XZF7 1577 aa17.47■□□□□ 0.39
MKLN1-206ENST00000458153 TARBP1Q13395 1621 aaKnown RBP17.43■□□□□ 0.38
MKLN1-206ENST00000458153 ARAP1Q96P48 1450 aa17.42■□□□□ 0.38
MKLN1-206ENST00000458153 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
MKLN1-206ENST00000458153 WDR97A6NE52 1622 aa17.37■□□□□ 0.37
MKLN1-206ENST00000458153 CYB5RLQ6IPT4 315 aa17.31■□□□□ 0.36
MKLN1-206ENST00000458153 CLASP1Q7Z460 1538 aa17.3■□□□□ 0.36
MKLN1-206ENST00000458153 AQRO60306 1485 aaKnown RBP eCLIP17.29■□□□□ 0.363e-6■■■■□ 24.7
MKLN1-206ENST00000458153 POLA1P09884 1462 aaPredicted RBP17.28■□□□□ 0.36
MKLN1-206ENST00000458153 SYNJ1O43426 1573 aa17.24■□□□□ 0.35
MKLN1-206ENST00000458153 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
MKLN1-206ENST00000458153 MAGI1Q96QZ7 1491 aaPredicted RBP17.2■□□□□ 0.34
MKLN1-206ENST00000458153 SNAPC4Q5SXM2 1469 aa17.19■□□□□ 0.34
MKLN1-206ENST00000458153 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
MKLN1-206ENST00000458153 SOGA1O94964 1423 aa17.15■□□□□ 0.34
MKLN1-206ENST00000458153 FBLN2P98095 1184 aa17.13■□□□□ 0.33
MKLN1-206ENST00000458153 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
MKLN1-206ENST00000458153 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
MKLN1-206ENST00000458153 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
MKLN1-206ENST00000458153 PBRM1Q86U86 1689 aa17.11■□□□□ 0.33
MKLN1-206ENST00000458153 TDRD9Q8NDG6 1382 aaKnown RBP17.09■□□□□ 0.33
MKLN1-206ENST00000458153 AEBP2Q6ZN18 517 aaPredicted RBP17.06■□□□□ 0.32
MKLN1-206ENST00000458153 CUX1P39880 1505 aa17.06■□□□□ 0.32
MKLN1-206ENST00000458153 GAPVD1Q14C86 1478 aa17.04■□□□□ 0.32
MKLN1-206ENST00000458153 CHMP7Q8WUX9 453 aaPredicted RBP17.03■□□□□ 0.32
MKLN1-206ENST00000458153 ABCA5Q8WWZ7 1642 aa17.01■□□□□ 0.31
MKLN1-206ENST00000458153 ABCA10Q8WWZ4 1543 aa16.96■□□□□ 0.31
MKLN1-206ENST00000458153 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
MKLN1-206ENST00000458153 ADAMTS12P58397 1594 aa16.91■□□□□ 0.3
MKLN1-206ENST00000458153 GRIN2AQ12879 1464 aa16.9■□□□□ 0.3
MKLN1-206ENST00000458153 CEP170Q5SW79 1584 aa16.88■□□□□ 0.29
MKLN1-206ENST00000458153 NUP160Q12769 1436 aa16.88■□□□□ 0.29
MKLN1-206ENST00000458153 ERCC6L2Q5T890 1561 aa16.88■□□□□ 0.29
MKLN1-206ENST00000458153 KIF13AQ9H1H9 1805 aa16.87■□□□□ 0.29
MKLN1-206ENST00000458153 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
MKLN1-206ENST00000458153 FHAD1B1AJZ9 1412 aa16.78■□□□□ 0.28
MKLN1-206ENST00000458153 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.27
MKLN1-206ENST00000458153 WRNQ14191 1432 aaPredicted RBP eCLIP16.75■□□□□ 0.27
MKLN1-206ENST00000458153 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
MKLN1-206ENST00000458153 MAPKBP1O60336 1514 aa16.7■□□□□ 0.26
MKLN1-206ENST00000458153 ABCC10Q5T3U5 1492 aa16.68■□□□□ 0.26
MKLN1-206ENST00000458153 RUSC2Q8N2Y8 1516 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms