RNA–Protein interactions for RNA: ENST00000458114.5

SEMA4F-208, Transcript of ssemaphorin 4F, humanhuman

TSL 4

Gene SEMA4F, Length 577 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-208ENST00000458114 NISCHQ9Y2I1 1504 aa48.17■■■■■ 5.3
SEMA4F-208ENST00000458114 CCDC180Q9P1Z9 1646 aa42.79■■■■■ 4.44
SEMA4F-208ENST00000458114 ABCC9O60706 1549 aa42.24■■■■■ 4.35
SEMA4F-208ENST00000458114 DCAF8L2P0C7V8 631 aa40.41■■■■■ 4.06
SEMA4F-208ENST00000458114 RB1CC1Q8TDY2 1594 aa40.39■■■■■ 4.06
SEMA4F-208ENST00000458114 NACADO15069 1562 aa40.28■■■■■ 4.04
SEMA4F-208ENST00000458114 ZCCHC6Q5VYS8 1495 aaKnown RBP40.09■■■■■ 4.01
SEMA4F-208ENST00000458114 MYO15BQ96JP2 1530 aa39.92■■■■□ 3.98
SEMA4F-208ENST00000458114 DCAF1Q9Y4B6 1507 aa39.73■■■■□ 3.95
SEMA4F-208ENST00000458114 UNC13AQ9UPW8 1703 aa39.54■■■■□ 3.92
SEMA4F-208ENST00000458114 PABPN1Q86U42 306 aaKnown RBP eCLIP39.49■■■■□ 3.91
SEMA4F-208ENST00000458114 BICRAQ9NZM4 1560 aa39.29■■■■□ 3.88
SEMA4F-208ENST00000458114 SCRIBQ14160 1630 aa39.22■■■■□ 3.87
SEMA4F-208ENST00000458114 DNAJC5BQ9UF47 199 aa38.99■■■■□ 3.83
SEMA4F-208ENST00000458114 SHROOM4Q9ULL8 1493 aa38.65■■■■□ 3.78
SEMA4F-208ENST00000458114 EIF4G1Q04637 1599 aaKnown RBP38.23■■■■□ 3.71
SEMA4F-208ENST00000458114 CC2D2AQ9P2K1 1620 aa38.12■■■■□ 3.69
SEMA4F-208ENST00000458114 CECR2Q9BXF3 1484 aa37.9■■■■□ 3.66
SEMA4F-208ENST00000458114 SMARCA4P51532 1647 aa37.41■■■■□ 3.58
SEMA4F-208ENST00000458114 BAZ1AQ9NRL2 1556 aaPredicted RBP37.29■■■■□ 3.56
SEMA4F-208ENST00000458114 ATAD2BQ9ULI0 1458 aa37.26■■■■□ 3.56
SEMA4F-208ENST00000458114 NCAPD3P42695 1498 aa37.21■■■■□ 3.55
SEMA4F-208ENST00000458114 MROH2BQ7Z745 1585 aa37.19■■■■□ 3.54
SEMA4F-208ENST00000458114 SMARCA2P51531 1590 aa37.12■■■■□ 3.53
SEMA4F-208ENST00000458114 HMGXB3Q12766 1538 aa37■■■■□ 3.51
SEMA4F-208ENST00000458114 PEG3Q9GZU2 1588 aa36.98■■■■□ 3.51
SEMA4F-208ENST00000458114 BAZ1BQ9UIG0 1483 aaKnown RBP36.94■■■■□ 3.5
SEMA4F-208ENST00000458114 WIZO95785 1651 aa36.77■■■■□ 3.48
SEMA4F-208ENST00000458114 RSF1Q96T23 1441 aaPredicted RBP36.68■■■■□ 3.46
SEMA4F-208ENST00000458114 NESP48681 1621 aa36.53■■■■□ 3.44
SEMA4F-208ENST00000458114 ERCC6Q03468 1493 aa36.34■■■■□ 3.41
SEMA4F-208ENST00000458114 TOP2AP11388 1531 aaKnown RBP36.3■■■■□ 3.4
SEMA4F-208ENST00000458114 LAMC3Q9Y6N6 1575 aa36.23■■■■□ 3.39
SEMA4F-208ENST00000458114 CADPSQ9ULU8 1353 aa36.15■■■■□ 3.38
SEMA4F-208ENST00000458114 KIF21AQ7Z4S6 1674 aa36.01■■■■□ 3.36
SEMA4F-208ENST00000458114 PDS5BQ9NTI5 1447 aa36■■■■□ 3.35
SEMA4F-208ENST00000458114 CCDC88BA6NC98 1476 aa35.93■■■■□ 3.34
SEMA4F-208ENST00000458114 CUX2O14529 1486 aa35.93■■■■□ 3.34
SEMA4F-208ENST00000458114 THOC2Q8NI27 1593 aaKnown RBP35.92■■■■□ 3.34
SEMA4F-208ENST00000458114 CFTRP13569 1480 aa35.89■■■■□ 3.34
SEMA4F-208ENST00000458114 FANCD2Q9BXW9 1451 aa35.76■■■■□ 3.32
SEMA4F-208ENST00000458114 CEP164Q9UPV0 1460 aa35.71■■■■□ 3.31
SEMA4F-208ENST00000458114 MRC2Q9UBG0 1479 aa35.7■■■■□ 3.31
SEMA4F-208ENST00000458114 SUPT5HO00267 1087 aaKnown RBP35.69■■■■□ 3.3
SEMA4F-208ENST00000458114 WDR62O43379 1518 aa35.57■■■■□ 3.29
SEMA4F-208ENST00000458114 PRDM2Q13029 1718 aa35.52■■■■□ 3.28
SEMA4F-208ENST00000458114 URB2Q14146 1524 aaKnown RBP35.47■■■■□ 3.27
SEMA4F-208ENST00000458114 TOPBP1Q92547 1522 aa35.17■■■■□ 3.22
SEMA4F-208ENST00000458114 DNAJC5Q9H3Z4 198 aa35.1■■■■□ 3.21
SEMA4F-208ENST00000458114 DNMBPQ6XZF7 1577 aa35.08■■■■□ 3.21
SEMA4F-208ENST00000458114 ABCC8Q09428 1581 aa35.01■■■■□ 3.2
SEMA4F-208ENST00000458114 IFT140Q96RY7 1462 aa34.94■■■■□ 3.18
SEMA4F-208ENST00000458114 ZNF608Q9ULD9 1512 aaPredicted RBP34.93■■■■□ 3.18
SEMA4F-208ENST00000458114 CUX1P39880 1505 aa34.89■■■■□ 3.18
SEMA4F-208ENST00000458114 POLA1P09884 1462 aaPredicted RBP34.88■■■■□ 3.17
SEMA4F-208ENST00000458114 TARBP1Q13395 1621 aaKnown RBP34.8■■■■□ 3.16
SEMA4F-208ENST00000458114 RAD54L2Q9Y4B4 1467 aa34.79■■■■□ 3.16
SEMA4F-208ENST00000458114 FGD5Q6ZNL6 1462 aa34.78■■■■□ 3.16
SEMA4F-208ENST00000458114 EIF4G3O43432 1585 aaKnown RBP34.72■■■■□ 3.15
SEMA4F-208ENST00000458114 SOGA1O94964 1423 aa34.71■■■■□ 3.15
SEMA4F-208ENST00000458114 AQRO60306 1485 aaKnown RBP eCLIP34.69■■■■□ 3.14
SEMA4F-208ENST00000458114 TDRD9Q8NDG6 1382 aaKnown RBP34.61■■■■□ 3.13
SEMA4F-208ENST00000458114 WRNQ14191 1432 aaPredicted RBP eCLIP34.55■■■■□ 3.12
SEMA4F-208ENST00000458114 SYNJ1O43426 1573 aa34.54■■■■□ 3.12
SEMA4F-208ENST00000458114 TOP2BQ02880 1626 aa34.47■■■■□ 3.11
SEMA4F-208ENST00000458114 BIVM-ERCC5R4GMW8 1640 aa34.46■■■■□ 3.11
SEMA4F-208ENST00000458114 WDR97A6NE52 1622 aa34.45■■■■□ 3.11
SEMA4F-208ENST00000458114 OSCARQ8IYS5 282 aa34.44■■■■□ 3.1
SEMA4F-208ENST00000458114 ABCA10Q8WWZ4 1543 aa34.37■■■■□ 3.09
SEMA4F-208ENST00000458114 SNAPC4Q5SXM2 1469 aa34.35■■■■□ 3.09
SEMA4F-208ENST00000458114 FBLN2P98095 1184 aa34.3■■■■□ 3.08
SEMA4F-208ENST00000458114 CHD1O14646 1710 aa34.3■■■■□ 3.08
SEMA4F-208ENST00000458114 GRIN2BQ13224 1484 aa34.29■■■■□ 3.08
SEMA4F-208ENST00000458114 GAPVD1Q14C86 1478 aa34.29■■■■□ 3.08
SEMA4F-208ENST00000458114 ABCA5Q8WWZ7 1642 aa34.27■■■■□ 3.08
SEMA4F-208ENST00000458114 PBRM1Q86U86 1689 aa34.22■■■■□ 3.07
SEMA4F-208ENST00000458114 MAGI1Q96QZ7 1491 aaPredicted RBP34.19■■■■□ 3.06
SEMA4F-208ENST00000458114 CHMP7Q8WUX9 453 aaPredicted RBP34.11■■■■□ 3.05
SEMA4F-208ENST00000458114 SYNJ2O15056 1496 aa34.09■■■■□ 3.05
SEMA4F-208ENST00000458114 TRIM41Q8WV44 630 aa33.99■■■■□ 3.03
SEMA4F-208ENST00000458114 RIMBP3CA6NJZ7 1639 aa33.98■■■■□ 3.03
SEMA4F-208ENST00000458114 RIMBP3BA6NNM3 1639 aa33.98■■■■□ 3.03
SEMA4F-208ENST00000458114 RIMBP3Q9UFD9 1639 aa33.98■■■■□ 3.03
SEMA4F-208ENST00000458114 ADAMTS12P58397 1594 aa33.98■■■■□ 3.03
SEMA4F-208ENST00000458114 ARHGEF11O15085 1522 aa33.95■■■■□ 3.03
SEMA4F-208ENST00000458114 CLASP1Q7Z460 1538 aa33.93■■■■□ 3.02
SEMA4F-208ENST00000458114 ERICH3Q5RHP9 1530 aa33.92■■■■□ 3.02
SEMA4F-208ENST00000458114 GRIN2AQ12879 1464 aa33.88■■■■□ 3.01
SEMA4F-208ENST00000458114 FHAD1B1AJZ9 1412 aa33.87■■■■□ 3.01
SEMA4F-208ENST00000458114 KIF27Q86VH2 1401 aa33.8■■■■□ 3
SEMA4F-208ENST00000458114 CEP170Q5SW79 1584 aa33.77■■■■□ 3
SEMA4F-208ENST00000458114 IGF1RP08069 1367 aa33.74■■■□□ 2.99
SEMA4F-208ENST00000458114 NUP160Q12769 1436 aa33.72■■■□□ 2.99
SEMA4F-208ENST00000458114 ARAP1Q96P48 1450 aa33.7■■■□□ 2.99
SEMA4F-208ENST00000458114 CYB5RLQ6IPT4 315 aa33.68■■■□□ 2.98
SEMA4F-208ENST00000458114 RUSC2Q8N2Y8 1516 aa33.62■■■□□ 2.97
SEMA4F-208ENST00000458114 CUL7Q14999 1698 aa33.57■■■□□ 2.96
SEMA4F-208ENST00000458114 ERCC6L2Q5T890 1561 aa33.56■■■□□ 2.96
SEMA4F-208ENST00000458114 CARMIL1Q5VZK9 1371 aa33.52■■■□□ 2.96
SEMA4F-208ENST00000458114 SHROOM2Q13796 1616 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms