RNA–Protein interactions for RNA: ENST00000457871.2

SCNN1A-206, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 500 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-206ENST00000457871 NISCHQ9Y2I1 1504 aa35.8■■■■□ 3.32
SCNN1A-206ENST00000457871 ABCC9O60706 1549 aa32.87■■■□□ 2.85
SCNN1A-206ENST00000457871 CCDC180Q9P1Z9 1646 aa32.37■■■□□ 2.77
SCNN1A-206ENST00000457871 DNAJC5BQ9UF47 199 aa31.31■■■□□ 2.6
SCNN1A-206ENST00000457871 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
SCNN1A-206ENST00000457871 NACADO15069 1562 aa30.71■■■□□ 2.51
SCNN1A-206ENST00000457871 PABPN1Q86U42 306 aaKnown RBP eCLIP30.51■■■□□ 2.47
SCNN1A-206ENST00000457871 DCAF8L2P0C7V8 631 aa30.4■■■□□ 2.46
SCNN1A-206ENST00000457871 UNC13AQ9UPW8 1703 aa30.39■■■□□ 2.45
SCNN1A-206ENST00000457871 BICRAQ9NZM4 1560 aa30.2■■■□□ 2.42
SCNN1A-206ENST00000457871 MYO15BQ96JP2 1530 aa30.12■■■□□ 2.41
SCNN1A-206ENST00000457871 SHROOM4Q9ULL8 1493 aa29.71■■■□□ 2.35
SCNN1A-206ENST00000457871 CC2D2AQ9P2K1 1620 aa29.67■■■□□ 2.34
SCNN1A-206ENST00000457871 CECR2Q9BXF3 1484 aa29.67■■■□□ 2.34
SCNN1A-206ENST00000457871 ZCCHC6Q5VYS8 1495 aaKnown RBP29.57■■■□□ 2.32
SCNN1A-206ENST00000457871 DCAF1Q9Y4B6 1507 aa29.53■■■□□ 2.32
SCNN1A-206ENST00000457871 EIF4G1Q04637 1599 aaKnown RBP29.49■■■□□ 2.31
SCNN1A-206ENST00000457871 SCRIBQ14160 1630 aa29.46■■■□□ 2.31
SCNN1A-206ENST00000457871 DNAJC5Q9H3Z4 198 aa29.11■■■□□ 2.25
SCNN1A-206ENST00000457871 CUX2O14529 1486 aa28.55■■■□□ 2.16
SCNN1A-206ENST00000457871 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
SCNN1A-206ENST00000457871 NCAPD3P42695 1498 aa28.36■■■□□ 2.13
SCNN1A-206ENST00000457871 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
SCNN1A-206ENST00000457871 HMGXB3Q12766 1538 aa28.11■■■□□ 2.09
SCNN1A-206ENST00000457871 NESP48681 1621 aa28.1■■■□□ 2.09
SCNN1A-206ENST00000457871 SMARCA2P51531 1590 aa28.08■■■□□ 2.09
SCNN1A-206ENST00000457871 SMARCA4P51532 1647 aa28.06■■■□□ 2.08
SCNN1A-206ENST00000457871 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
SCNN1A-206ENST00000457871 BAZ1BQ9UIG0 1483 aaKnown RBP27.89■■■□□ 2.06
SCNN1A-206ENST00000457871 BAZ1AQ9NRL2 1556 aaPredicted RBP27.82■■■□□ 2.04
SCNN1A-206ENST00000457871 LAMC3Q9Y6N6 1575 aa27.81■■■□□ 2.04
SCNN1A-206ENST00000457871 PEG3Q9GZU2 1588 aa27.78■■■□□ 2.04
SCNN1A-206ENST00000457871 KIF21AQ7Z4S6 1674 aa27.73■■■□□ 2.03
SCNN1A-206ENST00000457871 PDS5BQ9NTI5 1447 aa27.65■■■□□ 2.02
SCNN1A-206ENST00000457871 TRIM41Q8WV44 630 aa27.62■■■□□ 2.01
SCNN1A-206ENST00000457871 MROH2BQ7Z745 1585 aa27.59■■■□□ 2.01
SCNN1A-206ENST00000457871 CADPSQ9ULU8 1353 aa27.47■■□□□ 1.99
SCNN1A-206ENST00000457871 MRC2Q9UBG0 1479 aa27.46■■□□□ 1.99
SCNN1A-206ENST00000457871 WDR62O43379 1518 aa27.42■■□□□ 1.98
SCNN1A-206ENST00000457871 WIZO95785 1651 aa27.24■■□□□ 1.95
SCNN1A-206ENST00000457871 CEP164Q9UPV0 1460 aa27.24■■□□□ 1.95
SCNN1A-206ENST00000457871 FANCD2Q9BXW9 1451 aa27.17■■□□□ 1.94
SCNN1A-206ENST00000457871 OSCARQ8IYS5 282 aa27.12■■□□□ 1.93
SCNN1A-206ENST00000457871 CFTRP13569 1480 aa27.05■■□□□ 1.92
SCNN1A-206ENST00000457871 URB2Q14146 1524 aaKnown RBP26.99■■□□□ 1.91
SCNN1A-206ENST00000457871 RIMBP3CA6NJZ7 1639 aa26.88■■□□□ 1.89
SCNN1A-206ENST00000457871 RIMBP3BA6NNM3 1639 aa26.88■■□□□ 1.89
SCNN1A-206ENST00000457871 RIMBP3Q9UFD9 1639 aa26.88■■□□□ 1.89
SCNN1A-206ENST00000457871 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
SCNN1A-206ENST00000457871 RSF1Q96T23 1441 aaPredicted RBP26.81■■□□□ 1.88
SCNN1A-206ENST00000457871 PRDM2Q13029 1718 aa26.76■■□□□ 1.87
SCNN1A-206ENST00000457871 ARHGEF11O15085 1522 aa26.74■■□□□ 1.87
SCNN1A-206ENST00000457871 ZNF608Q9ULD9 1512 aaPredicted RBP26.74■■□□□ 1.87
SCNN1A-206ENST00000457871 IFT140Q96RY7 1462 aa26.71■■□□□ 1.87
SCNN1A-206ENST00000457871 TOPBP1Q92547 1522 aa26.6■■□□□ 1.85
SCNN1A-206ENST00000457871 EIF4G3O43432 1585 aaKnown RBP26.58■■□□□ 1.85
SCNN1A-206ENST00000457871 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
SCNN1A-206ENST00000457871 CYB5RLQ6IPT4 315 aa26.53■■□□□ 1.84
SCNN1A-206ENST00000457871 CHD1O14646 1710 aa26.48■■□□□ 1.83
SCNN1A-206ENST00000457871 ABCC8Q09428 1581 aa26.47■■□□□ 1.83
SCNN1A-206ENST00000457871 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
SCNN1A-206ENST00000457871 ARAP1Q96P48 1450 aa26.44■■□□□ 1.82
SCNN1A-206ENST00000457871 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.82
SCNN1A-206ENST00000457871 TARBP1Q13395 1621 aaKnown RBP26.41■■□□□ 1.82
SCNN1A-206ENST00000457871 TRHP20396 242 aaPredicted RBP26.4■■□□□ 1.82
SCNN1A-206ENST00000457871 FBLN2P98095 1184 aa26.32■■□□□ 1.8
SCNN1A-206ENST00000457871 POLA1P09884 1462 aaPredicted RBP26.3■■□□□ 1.8
SCNN1A-206ENST00000457871 RAD54L2Q9Y4B4 1467 aa26.21■■□□□ 1.79
SCNN1A-206ENST00000457871 TDRD9Q8NDG6 1382 aaKnown RBP26.17■■□□□ 1.78
SCNN1A-206ENST00000457871 CLASP1Q7Z460 1538 aa26.16■■□□□ 1.78
SCNN1A-206ENST00000457871 SNAPC4Q5SXM2 1469 aa26.15■■□□□ 1.78
SCNN1A-206ENST00000457871 SOGA1O94964 1423 aa26.14■■□□□ 1.78
SCNN1A-206ENST00000457871 WDR97A6NE52 1622 aa26.09■■□□□ 1.77
SCNN1A-206ENST00000457871 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
SCNN1A-206ENST00000457871 FGD5Q6ZNL6 1462 aa26.05■■□□□ 1.76
SCNN1A-206ENST00000457871 MAGI1Q96QZ7 1491 aaPredicted RBP26.04■■□□□ 1.76
SCNN1A-206ENST00000457871 CHMP7Q8WUX9 453 aaPredicted RBP26.04■■□□□ 1.76
SCNN1A-206ENST00000457871 AEBP2Q6ZN18 517 aaPredicted RBP26.01■■□□□ 1.75
SCNN1A-206ENST00000457871 GRIN2BQ13224 1484 aa25.98■■□□□ 1.75
SCNN1A-206ENST00000457871 SYNJ2O15056 1496 aa25.97■■□□□ 1.75
SCNN1A-206ENST00000457871 CUX1P39880 1505 aa25.95■■□□□ 1.74
SCNN1A-206ENST00000457871 GAPVD1Q14C86 1478 aa25.9■■□□□ 1.74
SCNN1A-206ENST00000457871 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
SCNN1A-206ENST00000457871 ABCA5Q8WWZ7 1642 aa25.75■■□□□ 1.71
SCNN1A-206ENST00000457871 ERCC6L2Q5T890 1561 aa25.73■■□□□ 1.71
SCNN1A-206ENST00000457871 ABCA10Q8WWZ4 1543 aa25.73■■□□□ 1.71
SCNN1A-206ENST00000457871 GRIN2AQ12879 1464 aa25.66■■□□□ 1.7
SCNN1A-206ENST00000457871 CEP170Q5SW79 1584 aa25.62■■□□□ 1.69
SCNN1A-206ENST00000457871 NUP160Q12769 1436 aa25.6■■□□□ 1.69
SCNN1A-206ENST00000457871 ADAMTS12P58397 1594 aa25.6■■□□□ 1.69
SCNN1A-206ENST00000457871 SHROOM2Q13796 1616 aa25.55■■□□□ 1.68
SCNN1A-206ENST00000457871 KIF13AQ9H1H9 1805 aa25.51■■□□□ 1.67
SCNN1A-206ENST00000457871 WRNQ14191 1432 aaPredicted RBP eCLIP25.49■■□□□ 1.67
SCNN1A-206ENST00000457871 FHAD1B1AJZ9 1412 aa25.47■■□□□ 1.67
SCNN1A-206ENST00000457871 BIVM-ERCC5R4GMW8 1640 aa25.4■■□□□ 1.66
SCNN1A-206ENST00000457871 TOP2BQ02880 1626 aa25.39■■□□□ 1.66
SCNN1A-206ENST00000457871 ERICH3Q5RHP9 1530 aa25.38■■□□□ 1.65
SCNN1A-206ENST00000457871 PRG4Q92954 1404 aaPredicted RBP25.37■■□□□ 1.65
SCNN1A-206ENST00000457871 ABCC10Q5T3U5 1492 aa25.3■■□□□ 1.64
SCNN1A-206ENST00000457871 JPH4Q96JJ6 628 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms