RNA–Protein interactions for RNA: ENST00000457816.1

LINC00489-201, long intergenic non-protein coding RNA 489, humanhuman

TSL 5 BASIC

Gene LINC00489, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00489-201ENST00000457816 NISCHQ9Y2I1 1504 aa18.59■□□□□ 0.57
LINC00489-201ENST00000457816 ABCC9O60706 1549 aa17.08■□□□□ 0.32
LINC00489-201ENST00000457816 CCDC180Q9P1Z9 1646 aa16.75■□□□□ 0.27
LINC00489-201ENST00000457816 DNAJC5BQ9UF47 199 aa16.17■□□□□ 0.18
LINC00489-201ENST00000457816 RB1CC1Q8TDY2 1594 aa16.14■□□□□ 0.17
LINC00489-201ENST00000457816 DCAF8L2P0C7V8 631 aa15.98■□□□□ 0.15
LINC00489-201ENST00000457816 NACADO15069 1562 aa15.95■□□□□ 0.14
LINC00489-201ENST00000457816 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
LINC00489-201ENST00000457816 AEBP2Q6ZN18 517 aaPredicted RBP15.77■□□□□ 0.12
LINC00489-201ENST00000457816 UNC13AQ9UPW8 1703 aa15.62■□□□□ 0.09
LINC00489-201ENST00000457816 MYO15BQ96JP2 1530 aa15.61■□□□□ 0.09
LINC00489-201ENST00000457816 BICRAQ9NZM4 1560 aa15.58■□□□□ 0.08
LINC00489-201ENST00000457816 SHROOM4Q9ULL8 1493 aa15.43■□□□□ 0.06
LINC00489-201ENST00000457816 CECR2Q9BXF3 1484 aa15.42■□□□□ 0.06
LINC00489-201ENST00000457816 CC2D2AQ9P2K1 1620 aa15.36■□□□□ 0.05
LINC00489-201ENST00000457816 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
LINC00489-201ENST00000457816 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.04
LINC00489-201ENST00000457816 SCRIBQ14160 1630 aa15.31■□□□□ 0.04
LINC00489-201ENST00000457816 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
LINC00489-201ENST00000457816 DNAJC5Q9H3Z4 198 aa15.08■□□□□ 0
LINC00489-201ENST00000457816 ERCC6Q03468 1493 aa14.83□□□□□ -0.03
LINC00489-201ENST00000457816 CHIC1Q5VXU3 224 aa14.83□□□□□ -0.04
LINC00489-201ENST00000457816 CUX2O14529 1486 aa14.82□□□□□ -0.04
LINC00489-201ENST00000457816 NCAPD3P42695 1498 aa14.72□□□□□ -0.05
LINC00489-201ENST00000457816 ATAD2BQ9ULI0 1458 aa14.65□□□□□ -0.06
LINC00489-201ENST00000457816 SMARCA2P51531 1590 aa14.62□□□□□ -0.07
LINC00489-201ENST00000457816 HMGXB3Q12766 1538 aa14.58□□□□□ -0.08
LINC00489-201ENST00000457816 NESP48681 1621 aa14.56□□□□□ -0.08
LINC00489-201ENST00000457816 SMARCA4P51532 1647 aa14.55□□□□□ -0.08
LINC00489-201ENST00000457816 BAZ1BQ9UIG0 1483 aaKnown RBP14.54□□□□□ -0.08
LINC00489-201ENST00000457816 BAZ1AQ9NRL2 1556 aaPredicted RBP14.48□□□□□ -0.09
LINC00489-201ENST00000457816 LAMC3Q9Y6N6 1575 aa14.43□□□□□ -0.1
LINC00489-201ENST00000457816 PDS5BQ9NTI5 1447 aa14.43□□□□□ -0.1
LINC00489-201ENST00000457816 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
LINC00489-201ENST00000457816 TRIM41Q8WV44 630 aa14.42□□□□□ -0.1
LINC00489-201ENST00000457816 PEG3Q9GZU2 1588 aa14.37□□□□□ -0.11
LINC00489-201ENST00000457816 KIF21AQ7Z4S6 1674 aa14.32□□□□□ -0.12
LINC00489-201ENST00000457816 MROH2BQ7Z745 1585 aa14.31□□□□□ -0.12
LINC00489-201ENST00000457816 CADPSQ9ULU8 1353 aa14.3□□□□□ -0.12
LINC00489-201ENST00000457816 MRC2Q9UBG0 1479 aa14.28□□□□□ -0.12
LINC00489-201ENST00000457816 WDR62O43379 1518 aa14.21□□□□□ -0.13
LINC00489-201ENST00000457816 CEP164Q9UPV0 1460 aa14.19□□□□□ -0.14
LINC00489-201ENST00000457816 OSCARQ8IYS5 282 aa14.16□□□□□ -0.14
LINC00489-201ENST00000457816 FANCD2Q9BXW9 1451 aa14.14□□□□□ -0.15
LINC00489-201ENST00000457816 WIZO95785 1651 aa14.12□□□□□ -0.15
LINC00489-201ENST00000457816 CFTRP13569 1480 aa14.06□□□□□ -0.16
LINC00489-201ENST00000457816 PELP1Q8IZL8 1130 aaKnown RBP14.02□□□□□ -0.17
LINC00489-201ENST00000457816 URB2Q14146 1524 aaKnown RBP13.99□□□□□ -0.17
LINC00489-201ENST00000457816 MYT1Q01538 1121 aa13.97□□□□□ -0.17
LINC00489-201ENST00000457816 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
LINC00489-201ENST00000457816 RSF1Q96T23 1441 aaPredicted RBP13.95□□□□□ -0.18
LINC00489-201ENST00000457816 IFT140Q96RY7 1462 aa13.91□□□□□ -0.18
LINC00489-201ENST00000457816 RIMBP3CA6NJZ7 1639 aa13.9□□□□□ -0.18
LINC00489-201ENST00000457816 RIMBP3BA6NNM3 1639 aa13.9□□□□□ -0.18
LINC00489-201ENST00000457816 RIMBP3Q9UFD9 1639 aa13.9□□□□□ -0.18
LINC00489-201ENST00000457816 ZNF608Q9ULD9 1512 aaPredicted RBP13.87□□□□□ -0.19
LINC00489-201ENST00000457816 ARHGEF11O15085 1522 aa13.86□□□□□ -0.19
LINC00489-201ENST00000457816 CYB5RLQ6IPT4 315 aa13.85□□□□□ -0.19
LINC00489-201ENST00000457816 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
LINC00489-201ENST00000457816 TOPBP1Q92547 1522 aa13.82□□□□□ -0.2
LINC00489-201ENST00000457816 ABCC8Q09428 1581 aa13.82□□□□□ -0.2
LINC00489-201ENST00000457816 FBLN2P98095 1184 aa13.81□□□□□ -0.2
LINC00489-201ENST00000457816 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
LINC00489-201ENST00000457816 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
LINC00489-201ENST00000457816 EIF4G3O43432 1585 aaKnown RBP13.77□□□□□ -0.21
LINC00489-201ENST00000457816 DNMBPQ6XZF7 1577 aa13.75□□□□□ -0.21
LINC00489-201ENST00000457816 AQRO60306 1485 aaKnown RBP eCLIP13.74□□□□□ -0.21
LINC00489-201ENST00000457816 ARAP1Q96P48 1450 aa13.69□□□□□ -0.22
LINC00489-201ENST00000457816 CHD1O14646 1710 aa13.68□□□□□ -0.22
LINC00489-201ENST00000457816 TARBP1Q13395 1621 aaKnown RBP13.66□□□□□ -0.22
LINC00489-201ENST00000457816 SENP3Q9H4L4 574 aaPredicted RBP13.66□□□□□ -0.22
LINC00489-201ENST00000457816 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
LINC00489-201ENST00000457816 CHMP7Q8WUX9 453 aaPredicted RBP13.65□□□□□ -0.22
LINC00489-201ENST00000457816 TDRD9Q8NDG6 1382 aaKnown RBP13.64□□□□□ -0.23
LINC00489-201ENST00000457816 SOGA1O94964 1423 aa13.64□□□□□ -0.23
LINC00489-201ENST00000457816 RAD54L2Q9Y4B4 1467 aa13.62□□□□□ -0.23
LINC00489-201ENST00000457816 SNAPC4Q5SXM2 1469 aa13.61□□□□□ -0.23
LINC00489-201ENST00000457816 SYNJ1O43426 1573 aa13.58□□□□□ -0.24
LINC00489-201ENST00000457816 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
LINC00489-201ENST00000457816 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
LINC00489-201ENST00000457816 WDR97A6NE52 1622 aa13.55□□□□□ -0.24
LINC00489-201ENST00000457816 GRIN2BQ13224 1484 aa13.55□□□□□ -0.24
LINC00489-201ENST00000457816 CLASP1Q7Z460 1538 aa13.54□□□□□ -0.24
LINC00489-201ENST00000457816 TTBK1Q5TCY1 1321 aaPredicted RBP13.53□□□□□ -0.24
LINC00489-201ENST00000457816 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
LINC00489-201ENST00000457816 GAPVD1Q14C86 1478 aa13.48□□□□□ -0.25
LINC00489-201ENST00000457816 CUX1P39880 1505 aa13.47□□□□□ -0.25
LINC00489-201ENST00000457816 PBRM1Q86U86 1689 aa13.39□□□□□ -0.27
LINC00489-201ENST00000457816 POTEDQ86YR6 584 aa13.38□□□□□ -0.27
LINC00489-201ENST00000457816 ABCA10Q8WWZ4 1543 aa13.37□□□□□ -0.27
LINC00489-201ENST00000457816 PHF23Q9BUL5 403 aaPredicted RBP13.36□□□□□ -0.27
LINC00489-201ENST00000457816 GRIN2AQ12879 1464 aa13.35□□□□□ -0.27
LINC00489-201ENST00000457816 WRNQ14191 1432 aaPredicted RBP eCLIP13.33□□□□□ -0.28
LINC00489-201ENST00000457816 ABCA5Q8WWZ7 1642 aa13.33□□□□□ -0.28
LINC00489-201ENST00000457816 CEP170Q5SW79 1584 aa13.29□□□□□ -0.28
LINC00489-201ENST00000457816 ERCC6L2Q5T890 1561 aa13.29□□□□□ -0.28
LINC00489-201ENST00000457816 FHAD1B1AJZ9 1412 aa13.29□□□□□ -0.28
LINC00489-201ENST00000457816 NUP160Q12769 1436 aa13.29□□□□□ -0.28
LINC00489-201ENST00000457816 ADAMTS12P58397 1594 aa13.28□□□□□ -0.28
LINC00489-201ENST00000457816 SUPT5HO00267 1087 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms