RNA–Protein interactions for RNA: ENST00000457767.5

SGSM3-204, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 1,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-204ENST00000457767 NISCHQ9Y2I1 1504 aa35.53■■■■□ 3.28
SGSM3-204ENST00000457767 ABCC9O60706 1549 aa31.95■■■□□ 2.71
SGSM3-204ENST00000457767 CCDC180Q9P1Z9 1646 aa31.86■■■□□ 2.69
SGSM3-204ENST00000457767 RB1CC1Q8TDY2 1594 aa30.35■■■□□ 2.45
SGSM3-204ENST00000457767 NACADO15069 1562 aa30.14■■■□□ 2.42
SGSM3-204ENST00000457767 DNAJC5BQ9UF47 199 aa30.12■■■□□ 2.41
SGSM3-204ENST00000457767 DCAF8L2P0C7V8 631 aa29.98■■■□□ 2.39
SGSM3-204ENST00000457767 PABPN1Q86U42 306 aaKnown RBP eCLIP29.77■■■□□ 2.36
SGSM3-204ENST00000457767 UNC13AQ9UPW8 1703 aa29.76■■■□□ 2.35
SGSM3-204ENST00000457767 MYO15BQ96JP2 1530 aa29.71■■■□□ 2.35
SGSM3-204ENST00000457767 BICRAQ9NZM4 1560 aa29.56■■■□□ 2.32
SGSM3-204ENST00000457767 ZCCHC6Q5VYS8 1495 aaKnown RBP29.43■■■□□ 2.3
SGSM3-204ENST00000457767 DCAF1Q9Y4B6 1507 aa29.32■■■□□ 2.28
SGSM3-204ENST00000457767 SCRIBQ14160 1630 aa29.06■■■□□ 2.24
SGSM3-204ENST00000457767 SHROOM4Q9ULL8 1493 aa29.03■■■□□ 2.24
SGSM3-204ENST00000457767 CC2D2AQ9P2K1 1620 aa28.87■■■□□ 2.21
SGSM3-204ENST00000457767 EIF4G1Q04637 1599 aaKnown RBP28.79■■■□□ 2.2
SGSM3-204ENST00000457767 CECR2Q9BXF3 1484 aa28.77■■■□□ 2.2
SGSM3-204ENST00000457767 NCAPD3P42695 1498 aa27.85■■■□□ 2.05
SGSM3-204ENST00000457767 ATAD2BQ9ULI0 1458 aa27.77■■■□□ 2.04
SGSM3-204ENST00000457767 SMARCA4P51532 1647 aa27.72■■■□□ 2.03
SGSM3-204ENST00000457767 SMARCA2P51531 1590 aa27.64■■■□□ 2.01
SGSM3-204ENST00000457767 HMGXB3Q12766 1538 aa27.62■■■□□ 2.01
SGSM3-204ENST00000457767 DNAJC5Q9H3Z4 198 aa27.61■■■□□ 2.01
SGSM3-204ENST00000457767 BAZ1AQ9NRL2 1556 aaPredicted RBP27.54■■■□□ 2
SGSM3-204ENST00000457767 ERCC6Q03468 1493 aa27.52■■■□□ 2
SGSM3-204ENST00000457767 CUX2O14529 1486 aa27.51■■■□□ 2
SGSM3-204ENST00000457767 NESP48681 1621 aa27.47■■□□□ 1.99
SGSM3-204ENST00000457767 PEG3Q9GZU2 1588 aa27.46■■□□□ 1.99
SGSM3-204ENST00000457767 BAZ1BQ9UIG0 1483 aaKnown RBP27.45■■□□□ 1.99
SGSM3-204ENST00000457767 MROH2BQ7Z745 1585 aa27.41■■□□□ 1.98
SGSM3-204ENST00000457767 LAMC3Q9Y6N6 1575 aa27.2■■□□□ 1.94
SGSM3-204ENST00000457767 THOC2Q8NI27 1593 aaKnown RBP27.18■■□□□ 1.94
SGSM3-204ENST00000457767 KIF21AQ7Z4S6 1674 aa27.09■■□□□ 1.93
SGSM3-204ENST00000457767 WIZO95785 1651 aa27.08■■□□□ 1.93
SGSM3-204ENST00000457767 PDS5BQ9NTI5 1447 aa27.03■■□□□ 1.92
SGSM3-204ENST00000457767 CADPSQ9ULU8 1353 aa26.99■■□□□ 1.91
SGSM3-204ENST00000457767 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
SGSM3-204ENST00000457767 MRC2Q9UBG0 1479 aa26.81■■□□□ 1.88
SGSM3-204ENST00000457767 WDR62O43379 1518 aa26.77■■□□□ 1.88
SGSM3-204ENST00000457767 CFTRP13569 1480 aa26.69■■□□□ 1.86
SGSM3-204ENST00000457767 CEP164Q9UPV0 1460 aa26.69■■□□□ 1.86
SGSM3-204ENST00000457767 TOP2AP11388 1531 aaKnown RBP26.69■■□□□ 1.86
SGSM3-204ENST00000457767 FANCD2Q9BXW9 1451 aa26.68■■□□□ 1.86
SGSM3-204ENST00000457767 URB2Q14146 1524 aaKnown RBP26.51■■□□□ 1.83
SGSM3-204ENST00000457767 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
SGSM3-204ENST00000457767 PRDM2Q13029 1718 aa26.4■■□□□ 1.82
SGSM3-204ENST00000457767 TRIM41Q8WV44 630 aa26.34■■□□□ 1.81
SGSM3-204ENST00000457767 OSCARQ8IYS5 282 aa26.26■■□□□ 1.79
SGSM3-204ENST00000457767 ZNF608Q9ULD9 1512 aaPredicted RBP26.2■■□□□ 1.79
SGSM3-204ENST00000457767 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
SGSM3-204ENST00000457767 IFT140Q96RY7 1462 aa26.17■■□□□ 1.78
SGSM3-204ENST00000457767 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
SGSM3-204ENST00000457767 DNMBPQ6XZF7 1577 aa26.07■■□□□ 1.76
SGSM3-204ENST00000457767 EIF4G3O43432 1585 aaKnown RBP26.01■■□□□ 1.75
SGSM3-204ENST00000457767 TARBP1Q13395 1621 aaKnown RBP25.98■■□□□ 1.75
SGSM3-204ENST00000457767 RIMBP3CA6NJZ7 1639 aa25.96■■□□□ 1.75
SGSM3-204ENST00000457767 RIMBP3BA6NNM3 1639 aa25.96■■□□□ 1.75
SGSM3-204ENST00000457767 RIMBP3Q9UFD9 1639 aa25.96■■□□□ 1.75
SGSM3-204ENST00000457767 AQRO60306 1485 aaKnown RBP eCLIP25.94■■□□□ 1.744e-7■■■■□ 25.4
SGSM3-204ENST00000457767 POLA1P09884 1462 aaPredicted RBP25.92■■□□□ 1.74
SGSM3-204ENST00000457767 ARHGEF11O15085 1522 aa25.86■■□□□ 1.73
SGSM3-204ENST00000457767 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
SGSM3-204ENST00000457767 CHD1O14646 1710 aa25.84■■□□□ 1.73
SGSM3-204ENST00000457767 SOGA1O94964 1423 aa25.8■■□□□ 1.72
SGSM3-204ENST00000457767 TDRD9Q8NDG6 1382 aaKnown RBP25.76■■□□□ 1.71
SGSM3-204ENST00000457767 CUX1P39880 1505 aa25.74■■□□□ 1.71
SGSM3-204ENST00000457767 FGD5Q6ZNL6 1462 aa25.74■■□□□ 1.71
SGSM3-204ENST00000457767 FBLN2P98095 1184 aa25.72■■□□□ 1.71
SGSM3-204ENST00000457767 CYB5RLQ6IPT4 315 aa25.67■■□□□ 1.7
SGSM3-204ENST00000457767 SNAPC4Q5SXM2 1469 aa25.65■■□□□ 1.7
SGSM3-204ENST00000457767 WDR97A6NE52 1622 aa25.63■■□□□ 1.69
SGSM3-204ENST00000457767 ARAP1Q96P48 1450 aa25.62■■□□□ 1.69
SGSM3-204ENST00000457767 SUPT5HO00267 1087 aaKnown RBP25.56■■□□□ 1.68
SGSM3-204ENST00000457767 GRIN2BQ13224 1484 aa25.55■■□□□ 1.68
SGSM3-204ENST00000457767 MAGI1Q96QZ7 1491 aaPredicted RBP25.55■■□□□ 1.68
SGSM3-204ENST00000457767 CLASP1Q7Z460 1538 aa25.55■■□□□ 1.68
SGSM3-204ENST00000457767 CHMP7Q8WUX9 453 aaPredicted RBP25.52■■□□□ 1.68
SGSM3-204ENST00000457767 SYNJ2O15056 1496 aa25.47■■□□□ 1.67
SGSM3-204ENST00000457767 PBRM1Q86U86 1689 aa25.47■■□□□ 1.67
SGSM3-204ENST00000457767 SYNJ1O43426 1573 aa25.47■■□□□ 1.67
SGSM3-204ENST00000457767 GAPVD1Q14C86 1478 aa25.47■■□□□ 1.67
SGSM3-204ENST00000457767 ABCA10Q8WWZ4 1543 aa25.45■■□□□ 1.66
SGSM3-204ENST00000457767 ABCA5Q8WWZ7 1642 aa25.43■■□□□ 1.66
SGSM3-204ENST00000457767 TRHP20396 242 aaPredicted RBP25.35■■□□□ 1.65
SGSM3-204ENST00000457767 WRNQ14191 1432 aaPredicted RBP eCLIP25.3■■□□□ 1.64
SGSM3-204ENST00000457767 BIVM-ERCC5R4GMW8 1640 aa25.3■■□□□ 1.64
SGSM3-204ENST00000457767 TOP2BQ02880 1626 aa25.29■■□□□ 1.64
SGSM3-204ENST00000457767 GRIN2AQ12879 1464 aa25.24■■□□□ 1.63
SGSM3-204ENST00000457767 ADAMTS12P58397 1594 aa25.22■■□□□ 1.63
SGSM3-204ENST00000457767 ERCC6L2Q5T890 1561 aa25.19■■□□□ 1.62
SGSM3-204ENST00000457767 CEP170Q5SW79 1584 aa25.18■■□□□ 1.62
SGSM3-204ENST00000457767 NUP160Q12769 1436 aa25.17■■□□□ 1.62
SGSM3-204ENST00000457767 FHAD1B1AJZ9 1412 aa25.13■■□□□ 1.61
SGSM3-204ENST00000457767 ERICH3Q5RHP9 1530 aa25.11■■□□□ 1.61
SGSM3-204ENST00000457767 SHROOM2Q13796 1616 aa25.08■■□□□ 1.6
SGSM3-204ENST00000457767 JPH4Q96JJ6 628 aa24.92■■□□□ 1.58
SGSM3-204ENST00000457767 PRG4Q92954 1404 aaPredicted RBP24.92■■□□□ 1.58
SGSM3-204ENST00000457767 RUSC2Q8N2Y8 1516 aa24.87■■□□□ 1.57
SGSM3-204ENST00000457767 IGF1RP08069 1367 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms