RNA–Protein interactions for RNA: ENST00000457723.1

SLC6A8-206, Transcript of solute carrier family 6 member 8, humanhuman

TSL 5

Gene SLC6A8, Length 266 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-206ENST00000457723 NISCHQ9Y2I1 1504 aa31.32■■■□□ 2.6
SLC6A8-206ENST00000457723 CCDC180Q9P1Z9 1646 aa28.15■■■□□ 2.1
SLC6A8-206ENST00000457723 ABCC9O60706 1549 aa28.08■■■□□ 2.09
SLC6A8-206ENST00000457723 RB1CC1Q8TDY2 1594 aa26.77■■□□□ 1.88
SLC6A8-206ENST00000457723 NACADO15069 1562 aa26.6■■□□□ 1.85
SLC6A8-206ENST00000457723 DNAJC5BQ9UF47 199 aa26.41■■□□□ 1.82
SLC6A8-206ENST00000457723 DCAF8L2P0C7V8 631 aa26.3■■□□□ 1.8
SLC6A8-206ENST00000457723 MYO15BQ96JP2 1530 aa26.27■■□□□ 1.8
SLC6A8-206ENST00000457723 UNC13AQ9UPW8 1703 aa26.24■■□□□ 1.79
SLC6A8-206ENST00000457723 PABPN1Q86U42 306 aaKnown RBP eCLIP26.12■■□□□ 1.77
SLC6A8-206ENST00000457723 BICRAQ9NZM4 1560 aa26.03■■□□□ 1.76
SLC6A8-206ENST00000457723 ZCCHC6Q5VYS8 1495 aaKnown RBP25.96■■□□□ 1.75
SLC6A8-206ENST00000457723 DCAF1Q9Y4B6 1507 aa25.92■■□□□ 1.74
SLC6A8-206ENST00000457723 SHROOM4Q9ULL8 1493 aa25.68■■□□□ 1.7
SLC6A8-206ENST00000457723 SCRIBQ14160 1630 aa25.58■■□□□ 1.69
SLC6A8-206ENST00000457723 CC2D2AQ9P2K1 1620 aa25.43■■□□□ 1.66
SLC6A8-206ENST00000457723 EIF4G1Q04637 1599 aaKnown RBP25.37■■□□□ 1.65
SLC6A8-206ENST00000457723 CECR2Q9BXF3 1484 aa25.32■■□□□ 1.64
SLC6A8-206ENST00000457723 NCAPD3P42695 1498 aa24.57■■□□□ 1.52
SLC6A8-206ENST00000457723 ATAD2BQ9ULI0 1458 aa24.46■■□□□ 1.51
SLC6A8-206ENST00000457723 SMARCA4P51532 1647 aa24.44■■□□□ 1.5
SLC6A8-206ENST00000457723 SMARCA2P51531 1590 aa24.39■■□□□ 1.5
SLC6A8-206ENST00000457723 HMGXB3Q12766 1538 aa24.37■■□□□ 1.49
SLC6A8-206ENST00000457723 BAZ1AQ9NRL2 1556 aaPredicted RBP24.3■■□□□ 1.48
SLC6A8-206ENST00000457723 DNAJC5Q9H3Z4 198 aa24.27■■□□□ 1.48
SLC6A8-206ENST00000457723 CUX2O14529 1486 aa24.26■■□□□ 1.47
SLC6A8-206ENST00000457723 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
SLC6A8-206ENST00000457723 ERCC6Q03468 1493 aa24.22■■□□□ 1.47
SLC6A8-206ENST00000457723 BAZ1BQ9UIG0 1483 aaKnown RBP24.19■■□□□ 1.46
SLC6A8-206ENST00000457723 NESP48681 1621 aa24.14■■□□□ 1.46
SLC6A8-206ENST00000457723 MROH2BQ7Z745 1585 aa24.12■■□□□ 1.45
SLC6A8-206ENST00000457723 LAMC3Q9Y6N6 1575 aa24.01■■□□□ 1.43
SLC6A8-206ENST00000457723 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.43
SLC6A8-206ENST00000457723 KIF21AQ7Z4S6 1674 aa23.87■■□□□ 1.41
SLC6A8-206ENST00000457723 WIZO95785 1651 aa23.84■■□□□ 1.41
SLC6A8-206ENST00000457723 PDS5BQ9NTI5 1447 aa23.83■■□□□ 1.4
SLC6A8-206ENST00000457723 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
SLC6A8-206ENST00000457723 MRC2Q9UBG0 1479 aa23.63■■□□□ 1.37
SLC6A8-206ENST00000457723 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
SLC6A8-206ENST00000457723 WDR62O43379 1518 aa23.61■■□□□ 1.37
SLC6A8-206ENST00000457723 CFTRP13569 1480 aa23.53■■□□□ 1.36
SLC6A8-206ENST00000457723 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
SLC6A8-206ENST00000457723 TOP2AP11388 1531 aaKnown RBP23.53■■□□□ 1.36
SLC6A8-206ENST00000457723 FANCD2Q9BXW9 1451 aa23.5■■□□□ 1.35
SLC6A8-206ENST00000457723 PRDM2Q13029 1718 aa23.34■■□□□ 1.33
SLC6A8-206ENST00000457723 URB2Q14146 1524 aaKnown RBP23.33■■□□□ 1.32
SLC6A8-206ENST00000457723 CCDC88BA6NC98 1476 aa23.26■■□□□ 1.31
SLC6A8-206ENST00000457723 OSCARQ8IYS5 282 aa23.11■■□□□ 1.29
SLC6A8-206ENST00000457723 TRIM41Q8WV44 630 aa23.09■■□□□ 1.29
SLC6A8-206ENST00000457723 IFT140Q96RY7 1462 aa23.07■■□□□ 1.28
SLC6A8-206ENST00000457723 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
SLC6A8-206ENST00000457723 ZNF608Q9ULD9 1512 aaPredicted RBP23.03■■□□□ 1.28
SLC6A8-206ENST00000457723 ABCC8Q09428 1581 aa23.03■■□□□ 1.28
SLC6A8-206ENST00000457723 DNMBPQ6XZF7 1577 aa22.98■■□□□ 1.27
SLC6A8-206ENST00000457723 EIF4G3O43432 1585 aaKnown RBP22.92■■□□□ 1.26
SLC6A8-206ENST00000457723 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
SLC6A8-206ENST00000457723 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
SLC6A8-206ENST00000457723 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
SLC6A8-206ENST00000457723 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
SLC6A8-206ENST00000457723 POLA1P09884 1462 aaPredicted RBP22.83■■□□□ 1.25
SLC6A8-206ENST00000457723 AQRO60306 1485 aaKnown RBP eCLIP22.8■■□□□ 1.241e-25■■■■■ 40.5
SLC6A8-206ENST00000457723 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
SLC6A8-206ENST00000457723 CHD1O14646 1710 aa22.77■■□□□ 1.23
SLC6A8-206ENST00000457723 RAD54L2Q9Y4B4 1467 aa22.73■■□□□ 1.23
SLC6A8-206ENST00000457723 SOGA1O94964 1423 aa22.7■■□□□ 1.22
SLC6A8-206ENST00000457723 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
SLC6A8-206ENST00000457723 CUX1P39880 1505 aa22.67■■□□□ 1.22
SLC6A8-206ENST00000457723 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
SLC6A8-206ENST00000457723 TDRD9Q8NDG6 1382 aaKnown RBP22.64■■□□□ 1.22
SLC6A8-206ENST00000457723 FBLN2P98095 1184 aa22.58■■□□□ 1.21
SLC6A8-206ENST00000457723 SNAPC4Q5SXM2 1469 aa22.58■■□□□ 1.2
SLC6A8-206ENST00000457723 CYB5RLQ6IPT4 315 aa22.55■■□□□ 1.2
SLC6A8-206ENST00000457723 MAGI1Q96QZ7 1491 aaPredicted RBP22.54■■□□□ 1.2
SLC6A8-206ENST00000457723 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
SLC6A8-206ENST00000457723 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
SLC6A8-206ENST00000457723 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.19
SLC6A8-206ENST00000457723 PBRM1Q86U86 1689 aa22.47■■□□□ 1.19
SLC6A8-206ENST00000457723 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
SLC6A8-206ENST00000457723 SYNJ2O15056 1496 aa22.46■■□□□ 1.19
SLC6A8-206ENST00000457723 CHMP7Q8WUX9 453 aaPredicted RBP22.45■■□□□ 1.18
SLC6A8-206ENST00000457723 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
SLC6A8-206ENST00000457723 ABCA10Q8WWZ4 1543 aa22.44■■□□□ 1.18
SLC6A8-206ENST00000457723 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
SLC6A8-206ENST00000457723 ABCA5Q8WWZ7 1642 aa22.42■■□□□ 1.18
SLC6A8-206ENST00000457723 BIVM-ERCC5R4GMW8 1640 aa22.33■■□□□ 1.17
SLC6A8-206ENST00000457723 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
SLC6A8-206ENST00000457723 WRNQ14191 1432 aaPredicted RBP eCLIP22.3■■□□□ 1.16
SLC6A8-206ENST00000457723 TRHP20396 242 aaPredicted RBP22.26■■□□□ 1.15
SLC6A8-206ENST00000457723 GRIN2AQ12879 1464 aa22.24■■□□□ 1.15
SLC6A8-206ENST00000457723 ADAMTS12P58397 1594 aa22.24■■□□□ 1.15
SLC6A8-206ENST00000457723 NUP160Q12769 1436 aa22.19■■□□□ 1.14
SLC6A8-206ENST00000457723 CEP170Q5SW79 1584 aa22.17■■□□□ 1.14
SLC6A8-206ENST00000457723 ERICH3Q5RHP9 1530 aa22.16■■□□□ 1.14
SLC6A8-206ENST00000457723 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
SLC6A8-206ENST00000457723 ERCC6L2Q5T890 1561 aa22.14■■□□□ 1.13
SLC6A8-206ENST00000457723 SHROOM2Q13796 1616 aa22.13■■□□□ 1.13
SLC6A8-206ENST00000457723 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
SLC6A8-206ENST00000457723 PRG4Q92954 1404 aaPredicted RBP21.92■■□□□ 1.1
SLC6A8-206ENST00000457723 JPH4Q96JJ6 628 aa21.92■■□□□ 1.1
SLC6A8-206ENST00000457723 IGF1RP08069 1367 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms