RNA–Protein interactions for RNA: ENST00000457601.1

SDHAP1-208, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4

Gene SDHAP1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-208ENST00000457601 NISCHQ9Y2I1 1504 aa29.65■■■□□ 2.34
SDHAP1-208ENST00000457601 CCDC180Q9P1Z9 1646 aa26.2■■□□□ 1.78
SDHAP1-208ENST00000457601 ABCC9O60706 1549 aa25.07■■□□□ 1.6
SDHAP1-208ENST00000457601 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.57
SDHAP1-208ENST00000457601 DCAF1Q9Y4B6 1507 aa24.56■■□□□ 1.52
SDHAP1-208ENST00000457601 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.51
SDHAP1-208ENST00000457601 NACADO15069 1562 aa24.44■■□□□ 1.5
SDHAP1-208ENST00000457601 DCAF8L2P0C7V8 631 aa24.42■■□□□ 1.5
SDHAP1-208ENST00000457601 RB1CC1Q8TDY2 1594 aa24.36■■□□□ 1.49
SDHAP1-208ENST00000457601 SCRIBQ14160 1630 aa23.94■■□□□ 1.42
SDHAP1-208ENST00000457601 UNC13AQ9UPW8 1703 aa23.9■■□□□ 1.42
SDHAP1-208ENST00000457601 SHROOM4Q9ULL8 1493 aa23.71■■□□□ 1.39
SDHAP1-208ENST00000457601 BICRAQ9NZM4 1560 aa23.64■■□□□ 1.37
SDHAP1-208ENST00000457601 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
SDHAP1-208ENST00000457601 PABPN1Q86U42 306 aaKnown RBP eCLIP23.45■■□□□ 1.34
SDHAP1-208ENST00000457601 CECR2Q9BXF3 1484 aa23.04■■□□□ 1.28
SDHAP1-208ENST00000457601 EIF4G1Q04637 1599 aaKnown RBP22.95■■□□□ 1.26
SDHAP1-208ENST00000457601 BAZ1AQ9NRL2 1556 aaPredicted RBP22.95■■□□□ 1.26
SDHAP1-208ENST00000457601 SMARCA4P51532 1647 aa22.93■■□□□ 1.26
SDHAP1-208ENST00000457601 MROH2BQ7Z745 1585 aa22.88■■□□□ 1.25
SDHAP1-208ENST00000457601 RSF1Q96T23 1441 aaPredicted RBP22.75■■□□□ 1.23
SDHAP1-208ENST00000457601 CC2D2AQ9P2K1 1620 aa22.74■■□□□ 1.23
SDHAP1-208ENST00000457601 PEG3Q9GZU2 1588 aa22.69■■□□□ 1.22
SDHAP1-208ENST00000457601 WIZO95785 1651 aa22.68■■□□□ 1.22
SDHAP1-208ENST00000457601 SMARCA2P51531 1590 aa22.64■■□□□ 1.22
SDHAP1-208ENST00000457601 ATAD2BQ9ULI0 1458 aa22.62■■□□□ 1.21
SDHAP1-208ENST00000457601 HMGXB3Q12766 1538 aa22.52■■□□□ 1.19
SDHAP1-208ENST00000457601 NCAPD3P42695 1498 aa22.51■■□□□ 1.19
SDHAP1-208ENST00000457601 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
SDHAP1-208ENST00000457601 BAZ1BQ9UIG0 1483 aaKnown RBP22.48■■□□□ 1.19
SDHAP1-208ENST00000457601 TOP2AP11388 1531 aaKnown RBP22.46■■□□□ 1.19
SDHAP1-208ENST00000457601 CCDC88BA6NC98 1476 aa22.15■■□□□ 1.14
SDHAP1-208ENST00000457601 LAMC3Q9Y6N6 1575 aa21.89■■□□□ 1.09
SDHAP1-208ENST00000457601 PRDM2Q13029 1718 aa21.88■■□□□ 1.09
SDHAP1-208ENST00000457601 CFTRP13569 1480 aa21.88■■□□□ 1.09
SDHAP1-208ENST00000457601 NESP48681 1621 aa21.87■■□□□ 1.09
SDHAP1-208ENST00000457601 CADPSQ9ULU8 1353 aa21.87■■□□□ 1.09
SDHAP1-208ENST00000457601 DNAJC5Q9H3Z4 198 aa21.78■■□□□ 1.08
SDHAP1-208ENST00000457601 KIF21AQ7Z4S6 1674 aa21.69■■□□□ 1.06
SDHAP1-208ENST00000457601 FANCD2Q9BXW9 1451 aa21.66■■□□□ 1.06
SDHAP1-208ENST00000457601 PDS5BQ9NTI5 1447 aa21.65■■□□□ 1.06
SDHAP1-208ENST00000457601 CEP164Q9UPV0 1460 aa21.59■■□□□ 1.05
SDHAP1-208ENST00000457601 ERCC6Q03468 1493 aa21.58■■□□□ 1.05
SDHAP1-208ENST00000457601 CUX2O14529 1486 aa21.58■■□□□ 1.04
SDHAP1-208ENST00000457601 ABCC8Q09428 1581 aa21.55■■□□□ 1.04
SDHAP1-208ENST00000457601 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
SDHAP1-208ENST00000457601 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.03
SDHAP1-208ENST00000457601 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.02
SDHAP1-208ENST00000457601 URB2Q14146 1524 aaKnown RBP21.44■■□□□ 1.02
SDHAP1-208ENST00000457601 SYNJ1O43426 1573 aa21.44■■□□□ 1.02
SDHAP1-208ENST00000457601 CUX1P39880 1505 aa21.43■■□□□ 1.02
SDHAP1-208ENST00000457601 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
SDHAP1-208ENST00000457601 BIVM-ERCC5R4GMW8 1640 aa21.42■■□□□ 1.02
SDHAP1-208ENST00000457601 WDR62O43379 1518 aa21.4■■□□□ 1.02
SDHAP1-208ENST00000457601 TOP2BQ02880 1626 aa21.4■■□□□ 1.02
SDHAP1-208ENST00000457601 TOPBP1Q92547 1522 aa21.39■■□□□ 1.01
SDHAP1-208ENST00000457601 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
SDHAP1-208ENST00000457601 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
SDHAP1-208ENST00000457601 POLA1P09884 1462 aaPredicted RBP21.25■□□□□ 0.99
SDHAP1-208ENST00000457601 TRIM41Q8WV44 630 aa21.2■□□□□ 0.98
SDHAP1-208ENST00000457601 WDR97A6NE52 1622 aa21.16■□□□□ 0.98
SDHAP1-208ENST00000457601 TARBP1Q13395 1621 aaKnown RBP21.15■□□□□ 0.98
SDHAP1-208ENST00000457601 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
SDHAP1-208ENST00000457601 SOGA1O94964 1423 aa21.11■□□□□ 0.97
SDHAP1-208ENST00000457601 IFT140Q96RY7 1462 aa21.1■□□□□ 0.97
SDHAP1-208ENST00000457601 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.96
SDHAP1-208ENST00000457601 ABCA5Q8WWZ7 1642 aa21.01■□□□□ 0.95
SDHAP1-208ENST00000457601 EIF4G3O43432 1585 aaKnown RBP20.99■□□□□ 0.95
SDHAP1-208ENST00000457601 ZNF608Q9ULD9 1512 aaPredicted RBP20.99■□□□□ 0.95
SDHAP1-208ENST00000457601 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
SDHAP1-208ENST00000457601 TDRD9Q8NDG6 1382 aaKnown RBP20.93■□□□□ 0.94
SDHAP1-208ENST00000457601 KIF27Q86VH2 1401 aa20.93■□□□□ 0.94
SDHAP1-208ENST00000457601 PBRM1Q86U86 1689 aa20.93■□□□□ 0.94
SDHAP1-208ENST00000457601 AQRO60306 1485 aaKnown RBP eCLIP20.9■□□□□ 0.942e-7■■■□□ 14.8
SDHAP1-208ENST00000457601 GAPVD1Q14C86 1478 aa20.9■□□□□ 0.94
SDHAP1-208ENST00000457601 EEA1Q15075 1411 aa20.87■□□□□ 0.93
SDHAP1-208ENST00000457601 ERICH3Q5RHP9 1530 aa20.83■□□□□ 0.93
SDHAP1-208ENST00000457601 GRIN2BQ13224 1484 aa20.83■□□□□ 0.93
SDHAP1-208ENST00000457601 CUL7Q14999 1698 aa20.79■□□□□ 0.92
SDHAP1-208ENST00000457601 FAM9AQ8IZU1 332 aaPredicted RBP20.78■□□□□ 0.92
SDHAP1-208ENST00000457601 ADAMTS12P58397 1594 aa20.77■□□□□ 0.92
SDHAP1-208ENST00000457601 SNAPC4Q5SXM2 1469 aa20.76■□□□□ 0.91
SDHAP1-208ENST00000457601 IGF1RP08069 1367 aa20.76■□□□□ 0.91
SDHAP1-208ENST00000457601 MAGI1Q96QZ7 1491 aaPredicted RBP20.74■□□□□ 0.91
SDHAP1-208ENST00000457601 CSRNP3Q8WYN3 585 aa20.71■□□□□ 0.91
SDHAP1-208ENST00000457601 KIF21BO75037 1637 aa20.7■□□□□ 0.9
SDHAP1-208ENST00000457601 PRXQ9BXM0 1461 aa20.69■□□□□ 0.9
SDHAP1-208ENST00000457601 FHAD1B1AJZ9 1412 aa20.67■□□□□ 0.9
SDHAP1-208ENST00000457601 CARMIL1Q5VZK9 1371 aa20.65■□□□□ 0.9
SDHAP1-208ENST00000457601 SYNJ2O15056 1496 aa20.64■□□□□ 0.89
SDHAP1-208ENST00000457601 CHD1O14646 1710 aa20.64■□□□□ 0.89
SDHAP1-208ENST00000457601 RAPGEF2Q9Y4G8 1499 aa20.62■□□□□ 0.89
SDHAP1-208ENST00000457601 GRIN2AQ12879 1464 aa20.58■□□□□ 0.89
SDHAP1-208ENST00000457601 GOLGA3Q08378 1498 aa20.57■□□□□ 0.88
SDHAP1-208ENST00000457601 CTTNBP2Q8WZ74 1663 aa20.51■□□□□ 0.87
SDHAP1-208ENST00000457601 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
SDHAP1-208ENST00000457601 CHMP7Q8WUX9 453 aaPredicted RBP20.5■□□□□ 0.87
SDHAP1-208ENST00000457601 FBLN2P98095 1184 aa20.49■□□□□ 0.87
SDHAP1-208ENST00000457601 EHMT2Q96KQ7 1210 aa20.49■□□□□ 0.87
SDHAP1-208ENST00000457601 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms