RNA–Protein interactions for RNA: ENST00000457419.1

CMTR1-203, Transcript of cap methyltransferase 1, humanhuman

TSL 3

Gene CMTR1, Length 769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTR1-203ENST00000457419 NISCHQ9Y2I1 1504 aa35.15■■■■□ 3.22
CMTR1-203ENST00000457419 CCDC180Q9P1Z9 1646 aa31.17■■■□□ 2.58
CMTR1-203ENST00000457419 ABCC9O60706 1549 aa30.51■■■□□ 2.47
CMTR1-203ENST00000457419 ZCCHC6Q5VYS8 1495 aaKnown RBP29.35■■■□□ 2.29
CMTR1-203ENST00000457419 NACADO15069 1562 aa29.24■■■□□ 2.27
CMTR1-203ENST00000457419 RB1CC1Q8TDY2 1594 aa29.22■■■□□ 2.27
CMTR1-203ENST00000457419 DCAF8L2P0C7V8 631 aa29.2■■■□□ 2.26
CMTR1-203ENST00000457419 MYO15BQ96JP2 1530 aa29.14■■■□□ 2.25
CMTR1-203ENST00000457419 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
CMTR1-203ENST00000457419 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
CMTR1-203ENST00000457419 DNAJC5BQ9UF47 199 aa28.58■■■□□ 2.17
CMTR1-203ENST00000457419 SCRIBQ14160 1630 aa28.48■■■□□ 2.15
CMTR1-203ENST00000457419 BICRAQ9NZM4 1560 aa28.39■■■□□ 2.14
CMTR1-203ENST00000457419 PABPN1Q86U42 306 aaKnown RBP eCLIP28.35■■■□□ 2.13
CMTR1-203ENST00000457419 SHROOM4Q9ULL8 1493 aa28.07■■■□□ 2.08
CMTR1-203ENST00000457419 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
CMTR1-203ENST00000457419 EIF4G1Q04637 1599 aaKnown RBP27.6■■■□□ 2.01
CMTR1-203ENST00000457419 CECR2Q9BXF3 1484 aa27.5■■□□□ 1.99
CMTR1-203ENST00000457419 SMARCA4P51532 1647 aa27.25■■□□□ 1.95
CMTR1-203ENST00000457419 BAZ1AQ9NRL2 1556 aaPredicted RBP27.22■■□□□ 1.95
CMTR1-203ENST00000457419 MROH2BQ7Z745 1585 aa27.11■■□□□ 1.93
CMTR1-203ENST00000457419 ATAD2BQ9ULI0 1458 aa27.04■■□□□ 1.92
CMTR1-203ENST00000457419 SMARCA2P51531 1590 aa27■■□□□ 1.91
CMTR1-203ENST00000457419 PEG3Q9GZU2 1588 aa26.98■■□□□ 1.91
CMTR1-203ENST00000457419 NCAPD3P42695 1498 aa26.98■■□□□ 1.91
CMTR1-203ENST00000457419 HMGXB3Q12766 1538 aa26.89■■□□□ 1.89
CMTR1-203ENST00000457419 RSF1Q96T23 1441 aaPredicted RBP26.85■■□□□ 1.89
CMTR1-203ENST00000457419 BAZ1BQ9UIG0 1483 aaKnown RBP26.82■■□□□ 1.88
CMTR1-203ENST00000457419 WIZO95785 1651 aa26.82■■□□□ 1.88
CMTR1-203ENST00000457419 TOP2AP11388 1531 aaKnown RBP26.55■■□□□ 1.84
CMTR1-203ENST00000457419 CUX2O14529 1486 aa26.36■■□□□ 1.81
CMTR1-203ENST00000457419 ERCC6Q03468 1493 aa26.36■■□□□ 1.81
CMTR1-203ENST00000457419 DNAJC5Q9H3Z4 198 aa26.33■■□□□ 1.81
CMTR1-203ENST00000457419 NESP48681 1621 aa26.32■■□□□ 1.8
CMTR1-203ENST00000457419 SUPT5HO00267 1087 aaKnown RBP26.25■■□□□ 1.79
CMTR1-203ENST00000457419 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
CMTR1-203ENST00000457419 CCDC88BA6NC98 1476 aa26.22■■□□□ 1.79
CMTR1-203ENST00000457419 CADPSQ9ULU8 1353 aa26.2■■□□□ 1.78
CMTR1-203ENST00000457419 CFTRP13569 1480 aa26.11■■□□□ 1.77
CMTR1-203ENST00000457419 THOC2Q8NI27 1593 aaKnown RBP26.04■■□□□ 1.76
CMTR1-203ENST00000457419 PDS5BQ9NTI5 1447 aa26.03■■□□□ 1.76
CMTR1-203ENST00000457419 KIF21AQ7Z4S6 1674 aa26.01■■□□□ 1.75
CMTR1-203ENST00000457419 PRDM2Q13029 1718 aa25.92■■□□□ 1.74
CMTR1-203ENST00000457419 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
CMTR1-203ENST00000457419 CEP164Q9UPV0 1460 aa25.86■■□□□ 1.73
CMTR1-203ENST00000457419 MRC2Q9UBG0 1479 aa25.8■■□□□ 1.72
CMTR1-203ENST00000457419 WDR62O43379 1518 aa25.73■■□□□ 1.71
CMTR1-203ENST00000457419 URB2Q14146 1524 aaKnown RBP25.67■■□□□ 1.7
CMTR1-203ENST00000457419 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
CMTR1-203ENST00000457419 DNMBPQ6XZF7 1577 aa25.52■■□□□ 1.68
CMTR1-203ENST00000457419 ABCC8Q09428 1581 aa25.48■■□□□ 1.67
CMTR1-203ENST00000457419 CUX1P39880 1505 aa25.42■■□□□ 1.66
CMTR1-203ENST00000457419 POLA1P09884 1462 aaPredicted RBP25.34■■□□□ 1.65
CMTR1-203ENST00000457419 IFT140Q96RY7 1462 aa25.31■■□□□ 1.64
CMTR1-203ENST00000457419 FGD5Q6ZNL6 1462 aa25.3■■□□□ 1.64
CMTR1-203ENST00000457419 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.64
CMTR1-203ENST00000457419 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
CMTR1-203ENST00000457419 TARBP1Q13395 1621 aaKnown RBP25.25■■□□□ 1.63
CMTR1-203ENST00000457419 BIVM-ERCC5R4GMW8 1640 aa25.24■■□□□ 1.63
CMTR1-203ENST00000457419 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
CMTR1-203ENST00000457419 RAD54L2Q9Y4B4 1467 aa25.21■■□□□ 1.63
CMTR1-203ENST00000457419 ZNF608Q9ULD9 1512 aaPredicted RBP25.21■■□□□ 1.63
CMTR1-203ENST00000457419 SOGA1O94964 1423 aa25.19■■□□□ 1.62
CMTR1-203ENST00000457419 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
CMTR1-203ENST00000457419 EIF4G3O43432 1585 aaKnown RBP25.13■■□□□ 1.61
CMTR1-203ENST00000457419 WDR97A6NE52 1622 aa25.11■■□□□ 1.61
CMTR1-203ENST00000457419 OSCARQ8IYS5 282 aa25.06■■□□□ 1.6
CMTR1-203ENST00000457419 AQRO60306 1485 aaKnown RBP eCLIP25.06■■□□□ 1.66e-7■■□□□ 13.6
CMTR1-203ENST00000457419 ABCA10Q8WWZ4 1543 aa25.06■■□□□ 1.6
CMTR1-203ENST00000457419 TDRD9Q8NDG6 1382 aaKnown RBP25.04■■□□□ 1.6
CMTR1-203ENST00000457419 ABCA5Q8WWZ7 1642 aa24.97■■□□□ 1.59
CMTR1-203ENST00000457419 GAPVD1Q14C86 1478 aa24.91■■□□□ 1.58
CMTR1-203ENST00000457419 GRIN2BQ13224 1484 aa24.89■■□□□ 1.57
CMTR1-203ENST00000457419 PBRM1Q86U86 1689 aa24.88■■□□□ 1.57
CMTR1-203ENST00000457419 RIMBP3CA6NJZ7 1639 aa24.88■■□□□ 1.57
CMTR1-203ENST00000457419 RIMBP3BA6NNM3 1639 aa24.88■■□□□ 1.57
CMTR1-203ENST00000457419 RIMBP3Q9UFD9 1639 aa24.88■■□□□ 1.57
CMTR1-203ENST00000457419 SNAPC4Q5SXM2 1469 aa24.86■■□□□ 1.57
CMTR1-203ENST00000457419 CHD1O14646 1710 aa24.83■■□□□ 1.57
CMTR1-203ENST00000457419 MAGI1Q96QZ7 1491 aaPredicted RBP24.81■■□□□ 1.56
CMTR1-203ENST00000457419 KIF27Q86VH2 1401 aa24.74■■□□□ 1.55
CMTR1-203ENST00000457419 ARHGEF11O15085 1522 aa24.74■■□□□ 1.55
CMTR1-203ENST00000457419 ERICH3Q5RHP9 1530 aa24.74■■□□□ 1.55
CMTR1-203ENST00000457419 ADAMTS12P58397 1594 aa24.72■■□□□ 1.55
CMTR1-203ENST00000457419 SYNJ2O15056 1496 aa24.71■■□□□ 1.55
CMTR1-203ENST00000457419 FBLN2P98095 1184 aa24.67■■□□□ 1.54
CMTR1-203ENST00000457419 FHAD1B1AJZ9 1412 aa24.64■■□□□ 1.54
CMTR1-203ENST00000457419 CHMP7Q8WUX9 453 aaPredicted RBP24.63■■□□□ 1.53
CMTR1-203ENST00000457419 CHIC1Q5VXU3 224 aa24.62■■□□□ 1.53
CMTR1-203ENST00000457419 IGF1RP08069 1367 aa24.62■■□□□ 1.53
CMTR1-203ENST00000457419 RUSC2Q8N2Y8 1516 aa24.61■■□□□ 1.53
CMTR1-203ENST00000457419 GRIN2AQ12879 1464 aa24.59■■□□□ 1.53
CMTR1-203ENST00000457419 CUL7Q14999 1698 aa24.56■■□□□ 1.52
CMTR1-203ENST00000457419 CLASP1Q7Z460 1538 aa24.51■■□□□ 1.51
CMTR1-203ENST00000457419 NUP160Q12769 1436 aa24.48■■□□□ 1.51
CMTR1-203ENST00000457419 CEP170Q5SW79 1584 aa24.48■■□□□ 1.51
CMTR1-203ENST00000457419 ARAP1Q96P48 1450 aa24.47■■□□□ 1.51
CMTR1-203ENST00000457419 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
CMTR1-203ENST00000457419 CYB5RLQ6IPT4 315 aa24.46■■□□□ 1.51
CMTR1-203ENST00000457419 EEA1Q15075 1411 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms