RNA–Protein interactions for RNA: ENST00000457286.5

SNX8-206, Transcript of sorting nexin 8, humanhuman

TSL 3

Gene SNX8, Length 686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-206ENST00000457286 NISCHQ9Y2I1 1504 aa34.81■■■■□ 3.16
SNX8-206ENST00000457286 ABCC9O60706 1549 aa31.73■■■□□ 2.67
SNX8-206ENST00000457286 CCDC180Q9P1Z9 1646 aa31.45■■■□□ 2.62
SNX8-206ENST00000457286 DNAJC5BQ9UF47 199 aa30.13■■■□□ 2.41
SNX8-206ENST00000457286 RB1CC1Q8TDY2 1594 aa30.1■■■□□ 2.41
SNX8-206ENST00000457286 NACADO15069 1562 aa29.81■■■□□ 2.36
SNX8-206ENST00000457286 DCAF8L2P0C7V8 631 aa29.46■■■□□ 2.31
SNX8-206ENST00000457286 PABPN1Q86U42 306 aaKnown RBP eCLIP29.46■■■□□ 2.31
SNX8-206ENST00000457286 UNC13AQ9UPW8 1703 aa29.4■■■□□ 2.3
SNX8-206ENST00000457286 MYO15BQ96JP2 1530 aa29.33■■■□□ 2.29
SNX8-206ENST00000457286 BICRAQ9NZM4 1560 aa29.22■■■□□ 2.27
SNX8-206ENST00000457286 SHROOM4Q9ULL8 1493 aa28.86■■■□□ 2.21
SNX8-206ENST00000457286 DCAF1Q9Y4B6 1507 aa28.79■■■□□ 2.2
SNX8-206ENST00000457286 ZCCHC6Q5VYS8 1495 aaKnown RBP28.77■■■□□ 2.2
SNX8-206ENST00000457286 CC2D2AQ9P2K1 1620 aa28.69■■■□□ 2.18
SNX8-206ENST00000457286 CECR2Q9BXF3 1484 aa28.66■■■□□ 2.18
SNX8-206ENST00000457286 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
SNX8-206ENST00000457286 EIF4G1Q04637 1599 aaKnown RBP28.54■■■□□ 2.16
SNX8-206ENST00000457286 DNAJC5Q9H3Z4 198 aa28■■■□□ 2.07
SNX8-206ENST00000457286 CUX2O14529 1486 aa27.57■■■□□ 2
SNX8-206ENST00000457286 NCAPD3P42695 1498 aa27.54■■■□□ 2
SNX8-206ENST00000457286 ERCC6Q03468 1493 aa27.44■■□□□ 1.98
SNX8-206ENST00000457286 ATAD2BQ9ULI0 1458 aa27.36■■□□□ 1.97
SNX8-206ENST00000457286 HMGXB3Q12766 1538 aa27.29■■□□□ 1.96
SNX8-206ENST00000457286 SMARCA2P51531 1590 aa27.28■■□□□ 1.96
SNX8-206ENST00000457286 SMARCA4P51532 1647 aa27.23■■□□□ 1.95
SNX8-206ENST00000457286 NESP48681 1621 aa27.15■■□□□ 1.94
SNX8-206ENST00000457286 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
SNX8-206ENST00000457286 BAZ1AQ9NRL2 1556 aaPredicted RBP27.06■■□□□ 1.92
SNX8-206ENST00000457286 PEG3Q9GZU2 1588 aa27.02■■□□□ 1.92
SNX8-206ENST00000457286 THOC2Q8NI27 1593 aaKnown RBP26.99■■□□□ 1.91
SNX8-206ENST00000457286 LAMC3Q9Y6N6 1575 aa26.97■■□□□ 1.91
SNX8-206ENST00000457286 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
SNX8-206ENST00000457286 KIF21AQ7Z4S6 1674 aa26.8■■□□□ 1.88
SNX8-206ENST00000457286 MROH2BQ7Z745 1585 aa26.8■■□□□ 1.88
SNX8-206ENST00000457286 CADPSQ9ULU8 1353 aa26.65■■□□□ 1.86
SNX8-206ENST00000457286 MRC2Q9UBG0 1479 aa26.59■■□□□ 1.85
SNX8-206ENST00000457286 WDR62O43379 1518 aa26.55■■□□□ 1.84
SNX8-206ENST00000457286 TRIM41Q8WV44 630 aa26.51■■□□□ 1.83
SNX8-206ENST00000457286 WIZO95785 1651 aa26.44■■□□□ 1.82
SNX8-206ENST00000457286 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
SNX8-206ENST00000457286 FANCD2Q9BXW9 1451 aa26.33■■□□□ 1.81
SNX8-206ENST00000457286 CFTRP13569 1480 aa26.28■■□□□ 1.8
SNX8-206ENST00000457286 OSCARQ8IYS5 282 aa26.24■■□□□ 1.79
SNX8-206ENST00000457286 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.78
SNX8-206ENST00000457286 TOP2AP11388 1531 aaKnown RBP26.11■■□□□ 1.77
SNX8-206ENST00000457286 RSF1Q96T23 1441 aaPredicted RBP26.11■■□□□ 1.77
SNX8-206ENST00000457286 PRDM2Q13029 1718 aa25.99■■□□□ 1.75
SNX8-206ENST00000457286 RIMBP3CA6NJZ7 1639 aa25.92■■□□□ 1.74
SNX8-206ENST00000457286 RIMBP3BA6NNM3 1639 aa25.92■■□□□ 1.74
SNX8-206ENST00000457286 RIMBP3Q9UFD9 1639 aa25.92■■□□□ 1.74
SNX8-206ENST00000457286 IFT140Q96RY7 1462 aa25.9■■□□□ 1.74
SNX8-206ENST00000457286 ZNF608Q9ULD9 1512 aaPredicted RBP25.87■■□□□ 1.73
SNX8-206ENST00000457286 CCDC88BA6NC98 1476 aa25.81■■□□□ 1.72
SNX8-206ENST00000457286 ARHGEF11O15085 1522 aa25.8■■□□□ 1.72
SNX8-206ENST00000457286 TOPBP1Q92547 1522 aa25.79■■□□□ 1.72
SNX8-206ENST00000457286 ABCC8Q09428 1581 aa25.76■■□□□ 1.71
SNX8-206ENST00000457286 EIF4G3O43432 1585 aaKnown RBP25.72■■□□□ 1.71
SNX8-206ENST00000457286 DNMBPQ6XZF7 1577 aa25.68■■□□□ 1.7
SNX8-206ENST00000457286 CYB5RLQ6IPT4 315 aa25.61■■□□□ 1.69
SNX8-206ENST00000457286 TARBP1Q13395 1621 aaKnown RBP25.61■■□□□ 1.69
SNX8-206ENST00000457286 CHD1O14646 1710 aa25.6■■□□□ 1.69
SNX8-206ENST00000457286 AQRO60306 1485 aaKnown RBP eCLIP25.58■■□□□ 1.69
SNX8-206ENST00000457286 ARAP1Q96P48 1450 aa25.51■■□□□ 1.67
SNX8-206ENST00000457286 POLA1P09884 1462 aaPredicted RBP25.5■■□□□ 1.67
SNX8-206ENST00000457286 FBLN2P98095 1184 aa25.46■■□□□ 1.67
SNX8-206ENST00000457286 TRHP20396 242 aaPredicted RBP25.43■■□□□ 1.66
SNX8-206ENST00000457286 RAD54L2Q9Y4B4 1467 aa25.39■■□□□ 1.65
SNX8-206ENST00000457286 SOGA1O94964 1423 aa25.38■■□□□ 1.65
SNX8-206ENST00000457286 WDR97A6NE52 1622 aa25.37■■□□□ 1.65
SNX8-206ENST00000457286 TDRD9Q8NDG6 1382 aaKnown RBP25.36■■□□□ 1.65
SNX8-206ENST00000457286 CLASP1Q7Z460 1538 aa25.32■■□□□ 1.64
SNX8-206ENST00000457286 SNAPC4Q5SXM2 1469 aa25.31■■□□□ 1.64
SNX8-206ENST00000457286 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
SNX8-206ENST00000457286 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
SNX8-206ENST00000457286 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
SNX8-206ENST00000457286 CHMP7Q8WUX9 453 aaPredicted RBP25.25■■□□□ 1.63
SNX8-206ENST00000457286 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
SNX8-206ENST00000457286 CUX1P39880 1505 aa25.2■■□□□ 1.62
SNX8-206ENST00000457286 SYNJ2O15056 1496 aa25.19■■□□□ 1.62
SNX8-206ENST00000457286 PBRM1Q86U86 1689 aa25.07■■□□□ 1.6
SNX8-206ENST00000457286 GAPVD1Q14C86 1478 aa25.07■■□□□ 1.6
SNX8-206ENST00000457286 ABCA10Q8WWZ4 1543 aa25■■□□□ 1.59
SNX8-206ENST00000457286 ABCA5Q8WWZ7 1642 aa24.99■■□□□ 1.59
SNX8-206ENST00000457286 AEBP2Q6ZN18 517 aaPredicted RBP24.98■■□□□ 1.59
SNX8-206ENST00000457286 GRIN2AQ12879 1464 aa24.89■■□□□ 1.57
SNX8-206ENST00000457286 ERCC6L2Q5T890 1561 aa24.85■■□□□ 1.57
SNX8-206ENST00000457286 NUP160Q12769 1436 aa24.84■■□□□ 1.57
SNX8-206ENST00000457286 WRNQ14191 1432 aaPredicted RBP eCLIP24.82■■□□□ 1.56
SNX8-206ENST00000457286 ADAMTS12P58397 1594 aa24.81■■□□□ 1.56
SNX8-206ENST00000457286 CEP170Q5SW79 1584 aa24.81■■□□□ 1.56
SNX8-206ENST00000457286 SHROOM2Q13796 1616 aa24.78■■□□□ 1.56
SNX8-206ENST00000457286 FHAD1B1AJZ9 1412 aa24.75■■□□□ 1.55
SNX8-206ENST00000457286 TOP2BQ02880 1626 aa24.72■■□□□ 1.55
SNX8-206ENST00000457286 BIVM-ERCC5R4GMW8 1640 aa24.72■■□□□ 1.55
SNX8-206ENST00000457286 ERICH3Q5RHP9 1530 aa24.69■■□□□ 1.54
SNX8-206ENST00000457286 KIF13AQ9H1H9 1805 aa24.64■■□□□ 1.54
SNX8-206ENST00000457286 PRG4Q92954 1404 aaPredicted RBP24.6■■□□□ 1.53
SNX8-206ENST00000457286 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
SNX8-206ENST00000457286 JPH4Q96JJ6 628 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms