RNA–Protein interactions for RNA: ENST00000457189.1

TSFM-205, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 3

Gene TSFM, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-205ENST00000457189 NISCHQ9Y2I1 1504 aa18.64■□□□□ 0.57
TSFM-205ENST00000457189 ABCC9O60706 1549 aa16.74■□□□□ 0.27
TSFM-205ENST00000457189 CCDC180Q9P1Z9 1646 aa16.7■□□□□ 0.26
TSFM-205ENST00000457189 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.15
TSFM-205ENST00000457189 DCAF8L2P0C7V8 631 aa15.87■□□□□ 0.13
TSFM-205ENST00000457189 NACADO15069 1562 aa15.84■□□□□ 0.13
TSFM-205ENST00000457189 MYO15BQ96JP2 1530 aa15.63■□□□□ 0.09
TSFM-205ENST00000457189 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
TSFM-205ENST00000457189 DNAJC5BQ9UF47 199 aa15.6■□□□□ 0.09
TSFM-205ENST00000457189 ZCCHC6Q5VYS8 1495 aaKnown RBP15.45■□□□□ 0.06
TSFM-205ENST00000457189 DCAF1Q9Y4B6 1507 aa15.41■□□□□ 0.06
TSFM-205ENST00000457189 UNC13AQ9UPW8 1703 aa15.36■□□□□ 0.05
TSFM-205ENST00000457189 BICRAQ9NZM4 1560 aa15.35■□□□□ 0.05
TSFM-205ENST00000457189 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.04
TSFM-205ENST00000457189 SCRIBQ14160 1630 aa15.23■□□□□ 0.03
TSFM-205ENST00000457189 CECR2Q9BXF3 1484 aa15.11■□□□□ 0.01
TSFM-205ENST00000457189 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
TSFM-205ENST00000457189 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
TSFM-205ENST00000457189 NCAPD3P42695 1498 aa14.62□□□□□ -0.07
TSFM-205ENST00000457189 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
TSFM-205ENST00000457189 SMARCA2P51531 1590 aa14.56□□□□□ -0.08
TSFM-205ENST00000457189 ERCC6Q03468 1493 aa14.55□□□□□ -0.08
TSFM-205ENST00000457189 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
TSFM-205ENST00000457189 SMARCA4P51532 1647 aa14.51□□□□□ -0.09
TSFM-205ENST00000457189 HMGXB3Q12766 1538 aa14.51□□□□□ -0.09
TSFM-205ENST00000457189 BAZ1BQ9UIG0 1483 aaKnown RBP14.48□□□□□ -0.09
TSFM-205ENST00000457189 CUX2O14529 1486 aa14.46□□□□□ -0.09
TSFM-205ENST00000457189 DNAJC5Q9H3Z4 198 aa14.43□□□□□ -0.1
TSFM-205ENST00000457189 PEG3Q9GZU2 1588 aa14.37□□□□□ -0.11
TSFM-205ENST00000457189 MROH2BQ7Z745 1585 aa14.33□□□□□ -0.12
TSFM-205ENST00000457189 NESP48681 1621 aa14.32□□□□□ -0.12
TSFM-205ENST00000457189 PDS5BQ9NTI5 1447 aa14.3□□□□□ -0.12
TSFM-205ENST00000457189 LAMC3Q9Y6N6 1575 aa14.29□□□□□ -0.12
TSFM-205ENST00000457189 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.14
TSFM-205ENST00000457189 THOC2Q8NI27 1593 aaKnown RBP14.16□□□□□ -0.14
TSFM-205ENST00000457189 WIZO95785 1651 aa14.11□□□□□ -0.15
TSFM-205ENST00000457189 MRC2Q9UBG0 1479 aa14.11□□□□□ -0.15
TSFM-205ENST00000457189 KIF21AQ7Z4S6 1674 aa14.08□□□□□ -0.16
TSFM-205ENST00000457189 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
TSFM-205ENST00000457189 CEP164Q9UPV0 1460 aa14.07□□□□□ -0.16
TSFM-205ENST00000457189 FANCD2Q9BXW9 1451 aa14.04□□□□□ -0.16
TSFM-205ENST00000457189 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
TSFM-205ENST00000457189 WDR62O43379 1518 aa14.02□□□□□ -0.16
TSFM-205ENST00000457189 CFTRP13569 1480 aa14.01□□□□□ -0.17
TSFM-205ENST00000457189 TRIM41Q8WV44 630 aa13.87□□□□□ -0.19
TSFM-205ENST00000457189 OSCARQ8IYS5 282 aa13.86□□□□□ -0.19
TSFM-205ENST00000457189 CCDC88BA6NC98 1476 aa13.86□□□□□ -0.19
TSFM-205ENST00000457189 URB2Q14146 1524 aaKnown RBP13.85□□□□□ -0.19
TSFM-205ENST00000457189 ABCC8Q09428 1581 aa13.8□□□□□ -0.2
TSFM-205ENST00000457189 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
TSFM-205ENST00000457189 PRDM2Q13029 1718 aa13.74□□□□□ -0.21
TSFM-205ENST00000457189 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
TSFM-205ENST00000457189 DNMBPQ6XZF7 1577 aa13.7□□□□□ -0.22
TSFM-205ENST00000457189 ZNF608Q9ULD9 1512 aaPredicted RBP13.69□□□□□ -0.22
TSFM-205ENST00000457189 FBLN2P98095 1184 aa13.63□□□□□ -0.23
TSFM-205ENST00000457189 EIF4G3O43432 1585 aaKnown RBP13.62□□□□□ -0.23
TSFM-205ENST00000457189 AQRO60306 1485 aaKnown RBP eCLIP13.6□□□□□ -0.231e-6■■■■■ 37.7
TSFM-205ENST00000457189 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
TSFM-205ENST00000457189 SOGA1O94964 1423 aa13.59□□□□□ -0.23
TSFM-205ENST00000457189 SUPT5HO00267 1087 aaKnown RBP13.56□□□□□ -0.24
TSFM-205ENST00000457189 TARBP1Q13395 1621 aaKnown RBP13.55□□□□□ -0.24
TSFM-205ENST00000457189 TDRD9Q8NDG6 1382 aaKnown RBP13.55□□□□□ -0.24
TSFM-205ENST00000457189 ARHGEF11O15085 1522 aa13.54□□□□□ -0.24
TSFM-205ENST00000457189 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
TSFM-205ENST00000457189 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
TSFM-205ENST00000457189 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
TSFM-205ENST00000457189 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
TSFM-205ENST00000457189 CHMP7Q8WUX9 453 aaPredicted RBP13.53□□□□□ -0.24
TSFM-205ENST00000457189 FGD5Q6ZNL6 1462 aa13.53□□□□□ -0.24
TSFM-205ENST00000457189 WDR97A6NE52 1622 aa13.51□□□□□ -0.25
TSFM-205ENST00000457189 CYB5RLQ6IPT4 315 aa13.51□□□□□ -0.25
TSFM-205ENST00000457189 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
TSFM-205ENST00000457189 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
TSFM-205ENST00000457189 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
TSFM-205ENST00000457189 CUX1P39880 1505 aa13.47□□□□□ -0.25
TSFM-205ENST00000457189 CHD1O14646 1710 aa13.44□□□□□ -0.26
TSFM-205ENST00000457189 SYNJ1O43426 1573 aa13.43□□□□□ -0.26
TSFM-205ENST00000457189 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
TSFM-205ENST00000457189 SYNJ2O15056 1496 aa13.42□□□□□ -0.26
TSFM-205ENST00000457189 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
TSFM-205ENST00000457189 WRNQ14191 1432 aaPredicted RBP eCLIP13.4□□□□□ -0.26
TSFM-205ENST00000457189 ARAP1Q96P48 1450 aa13.39□□□□□ -0.27
TSFM-205ENST00000457189 ABCA10Q8WWZ4 1543 aa13.38□□□□□ -0.27
TSFM-205ENST00000457189 CLASP1Q7Z460 1538 aa13.34□□□□□ -0.27
TSFM-205ENST00000457189 ABCA5Q8WWZ7 1642 aa13.29□□□□□ -0.28
TSFM-205ENST00000457189 PBRM1Q86U86 1689 aa13.29□□□□□ -0.28
TSFM-205ENST00000457189 FHAD1B1AJZ9 1412 aa13.27□□□□□ -0.29
TSFM-205ENST00000457189 GRIN2AQ12879 1464 aa13.27□□□□□ -0.29
TSFM-205ENST00000457189 TOP2BQ02880 1626 aa13.27□□□□□ -0.29
TSFM-205ENST00000457189 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
TSFM-205ENST00000457189 ADAMTS12P58397 1594 aa13.23□□□□□ -0.29
TSFM-205ENST00000457189 ERICH3Q5RHP9 1530 aa13.23□□□□□ -0.29
TSFM-205ENST00000457189 NUP160Q12769 1436 aa13.21□□□□□ -0.3
TSFM-205ENST00000457189 CEP170Q5SW79 1584 aa13.15□□□□□ -0.3
TSFM-205ENST00000457189 NPM1P06748 294 aaKnown RBP eCLIP13.13□□□□□ -0.31
TSFM-205ENST00000457189 JPH4Q96JJ6 628 aa13.13□□□□□ -0.31
TSFM-205ENST00000457189 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
TSFM-205ENST00000457189 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
TSFM-205ENST00000457189 ERCC6L2Q5T890 1561 aa13.09□□□□□ -0.31
TSFM-205ENST00000457189 AEBP2Q6ZN18 517 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms