RNA–Protein interactions for RNA: ENST00000457093.1

SHISA8-201, Transcript of shisa family member 8, humanhuman

APPRIS ALT2 TSL 3

Gene SHISA8, Length 486 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA8-201ENST00000457093 NISCHQ9Y2I1 1504 aa52.19■■■■■ 5.94
SHISA8-201ENST00000457093 CCDC180Q9P1Z9 1646 aa46.72■■■■■ 5.07
SHISA8-201ENST00000457093 ABCC9O60706 1549 aa46.42■■■■■ 5.02
SHISA8-201ENST00000457093 RB1CC1Q8TDY2 1594 aa44.35■■■■■ 4.69
SHISA8-201ENST00000457093 NACADO15069 1562 aa44.1■■■■■ 4.65
SHISA8-201ENST00000457093 DCAF8L2P0C7V8 631 aa44.06■■■■■ 4.64
SHISA8-201ENST00000457093 MYO15BQ96JP2 1530 aa43.58■■■■■ 4.57
SHISA8-201ENST00000457093 UNC13AQ9UPW8 1703 aa43.31■■■■■ 4.52
SHISA8-201ENST00000457093 PABPN1Q86U42 306 aaKnown RBP eCLIP43.29■■■■■ 4.52
SHISA8-201ENST00000457093 ZCCHC6Q5VYS8 1495 aaKnown RBP43.28■■■■■ 4.52
SHISA8-201ENST00000457093 DNAJC5BQ9UF47 199 aa43.24■■■■■ 4.51
SHISA8-201ENST00000457093 DCAF1Q9Y4B6 1507 aa43.12■■■■■ 4.49
SHISA8-201ENST00000457093 BICRAQ9NZM4 1560 aa42.96■■■■■ 4.47
SHISA8-201ENST00000457093 SCRIBQ14160 1630 aa42.57■■■■■ 4.4
SHISA8-201ENST00000457093 SHROOM4Q9ULL8 1493 aa42.47■■■■■ 4.39
SHISA8-201ENST00000457093 CC2D2AQ9P2K1 1620 aa41.94■■■■■ 4.3
SHISA8-201ENST00000457093 EIF4G1Q04637 1599 aaKnown RBP41.92■■■■■ 4.3
SHISA8-201ENST00000457093 CECR2Q9BXF3 1484 aa41.79■■■■■ 4.28
SHISA8-201ENST00000457093 NCAPD3P42695 1498 aa40.7■■■■■ 4.11
SHISA8-201ENST00000457093 SMARCA4P51532 1647 aa40.64■■■■■ 4.1
SHISA8-201ENST00000457093 ATAD2BQ9ULI0 1458 aa40.6■■■■■ 4.09
SHISA8-201ENST00000457093 SMARCA2P51531 1590 aa40.55■■■■■ 4.08
SHISA8-201ENST00000457093 BAZ1AQ9NRL2 1556 aaPredicted RBP40.51■■■■■ 4.08
SHISA8-201ENST00000457093 HMGXB3Q12766 1538 aa40.41■■■■■ 4.06
SHISA8-201ENST00000457093 BAZ1BQ9UIG0 1483 aaKnown RBP40.26■■■■■ 4.03
SHISA8-201ENST00000457093 PEG3Q9GZU2 1588 aa40.23■■■■■ 4.03
SHISA8-201ENST00000457093 MROH2BQ7Z745 1585 aa40.19■■■■■ 4.02
SHISA8-201ENST00000457093 ERCC6Q03468 1493 aa40.1■■■■■ 4.01
SHISA8-201ENST00000457093 NESP48681 1621 aa39.93■■■■□ 3.98
SHISA8-201ENST00000457093 CUX2O14529 1486 aa39.89■■■■□ 3.98
SHISA8-201ENST00000457093 WIZO95785 1651 aa39.75■■■■□ 3.95
SHISA8-201ENST00000457093 LAMC3Q9Y6N6 1575 aa39.75■■■■□ 3.95
SHISA8-201ENST00000457093 DNAJC5Q9H3Z4 198 aa39.55■■■■□ 3.92
SHISA8-201ENST00000457093 PDS5BQ9NTI5 1447 aa39.54■■■■□ 3.92
SHISA8-201ENST00000457093 CADPSQ9ULU8 1353 aa39.5■■■■□ 3.91
SHISA8-201ENST00000457093 RSF1Q96T23 1441 aaPredicted RBP39.49■■■■□ 3.91
SHISA8-201ENST00000457093 KIF21AQ7Z4S6 1674 aa39.46■■■■□ 3.91
SHISA8-201ENST00000457093 THOC2Q8NI27 1593 aaKnown RBP39.45■■■■□ 3.91
SHISA8-201ENST00000457093 TOP2AP11388 1531 aaKnown RBP39.26■■■■□ 3.88
SHISA8-201ENST00000457093 MRC2Q9UBG0 1479 aa39.13■■■■□ 3.85
SHISA8-201ENST00000457093 CFTRP13569 1480 aa39.08■■■■□ 3.85
SHISA8-201ENST00000457093 CEP164Q9UPV0 1460 aa39.06■■■■□ 3.84
SHISA8-201ENST00000457093 FANCD2Q9BXW9 1451 aa39.03■■■■□ 3.84
SHISA8-201ENST00000457093 WDR62O43379 1518 aa39■■■■□ 3.83
SHISA8-201ENST00000457093 CCDC88BA6NC98 1476 aa38.83■■■■□ 3.81
SHISA8-201ENST00000457093 PRDM2Q13029 1718 aa38.75■■■■□ 3.79
SHISA8-201ENST00000457093 URB2Q14146 1524 aaKnown RBP38.66■■■■□ 3.78
SHISA8-201ENST00000457093 ABCC8Q09428 1581 aa38.33■■■■□ 3.73
SHISA8-201ENST00000457093 TOPBP1Q92547 1522 aa38.32■■■■□ 3.72
SHISA8-201ENST00000457093 IFT140Q96RY7 1462 aa38.28■■■■□ 3.72
SHISA8-201ENST00000457093 DNMBPQ6XZF7 1577 aa38.22■■■■□ 3.71
SHISA8-201ENST00000457093 OSCARQ8IYS5 282 aa38.2■■■■□ 3.71
SHISA8-201ENST00000457093 ZNF608Q9ULD9 1512 aaPredicted RBP38.13■■■■□ 3.69
SHISA8-201ENST00000457093 SUPT5HO00267 1087 aaKnown RBP38.07■■■■□ 3.68
SHISA8-201ENST00000457093 TRIM41Q8WV44 630 aa37.98■■■■□ 3.67
SHISA8-201ENST00000457093 EIF4G3O43432 1585 aaKnown RBP37.94■■■■□ 3.66
SHISA8-201ENST00000457093 POLA1P09884 1462 aaPredicted RBP37.94■■■■□ 3.66
SHISA8-201ENST00000457093 TARBP1Q13395 1621 aaKnown RBP37.94■■■■□ 3.66
SHISA8-201ENST00000457093 AQRO60306 1485 aaKnown RBP eCLIP37.86■■■■□ 3.65
SHISA8-201ENST00000457093 SOGA1O94964 1423 aa37.83■■■■□ 3.65
SHISA8-201ENST00000457093 RAD54L2Q9Y4B4 1467 aa37.8■■■■□ 3.64
SHISA8-201ENST00000457093 FGD5Q6ZNL6 1462 aa37.76■■■■□ 3.63
SHISA8-201ENST00000457093 CUX1P39880 1505 aa37.75■■■■□ 3.63
SHISA8-201ENST00000457093 TDRD9Q8NDG6 1382 aaKnown RBP37.69■■■■□ 3.62
SHISA8-201ENST00000457093 FBLN2P98095 1184 aa37.65■■■■□ 3.62
SHISA8-201ENST00000457093 CHD1O14646 1710 aa37.64■■■■□ 3.62
SHISA8-201ENST00000457093 WDR97A6NE52 1622 aa37.61■■■■□ 3.61
SHISA8-201ENST00000457093 RIMBP3CA6NJZ7 1639 aa37.58■■■■□ 3.61
SHISA8-201ENST00000457093 RIMBP3BA6NNM3 1639 aa37.58■■■■□ 3.61
SHISA8-201ENST00000457093 RIMBP3Q9UFD9 1639 aa37.58■■■■□ 3.61
SHISA8-201ENST00000457093 ARHGEF11O15085 1522 aa37.49■■■■□ 3.59
SHISA8-201ENST00000457093 SNAPC4Q5SXM2 1469 aa37.47■■■■□ 3.59
SHISA8-201ENST00000457093 GRIN2BQ13224 1484 aa37.45■■■■□ 3.59
SHISA8-201ENST00000457093 CHMP7Q8WUX9 453 aaPredicted RBP37.42■■■■□ 3.58
SHISA8-201ENST00000457093 MAGI1Q96QZ7 1491 aaPredicted RBP37.41■■■■□ 3.58
SHISA8-201ENST00000457093 GAPVD1Q14C86 1478 aa37.36■■■■□ 3.57
SHISA8-201ENST00000457093 ABCA10Q8WWZ4 1543 aa37.35■■■■□ 3.57
SHISA8-201ENST00000457093 PBRM1Q86U86 1689 aa37.31■■■■□ 3.56
SHISA8-201ENST00000457093 WRNQ14191 1432 aaPredicted RBP eCLIP37.29■■■■□ 3.56
SHISA8-201ENST00000457093 CYB5RLQ6IPT4 315 aa37.28■■■■□ 3.56
SHISA8-201ENST00000457093 SYNJ2O15056 1496 aa37.27■■■■□ 3.56
SHISA8-201ENST00000457093 TOP2BQ02880 1626 aa37.25■■■■□ 3.55
SHISA8-201ENST00000457093 SYNJ1O43426 1573 aa37.25■■■■□ 3.55
SHISA8-201ENST00000457093 BIVM-ERCC5R4GMW8 1640 aa37.25■■■■□ 3.55
SHISA8-201ENST00000457093 ABCA5Q8WWZ7 1642 aa37.24■■■■□ 3.55
SHISA8-201ENST00000457093 CLASP1Q7Z460 1538 aa37.16■■■■□ 3.54
SHISA8-201ENST00000457093 ARAP1Q96P48 1450 aa37.12■■■■□ 3.53
SHISA8-201ENST00000457093 GRIN2AQ12879 1464 aa36.94■■■■□ 3.5
SHISA8-201ENST00000457093 ADAMTS12P58397 1594 aa36.93■■■■□ 3.5
SHISA8-201ENST00000457093 FHAD1B1AJZ9 1412 aa36.9■■■■□ 3.5
SHISA8-201ENST00000457093 ERICH3Q5RHP9 1530 aa36.9■■■■□ 3.5
SHISA8-201ENST00000457093 TRHP20396 242 aaPredicted RBP36.8■■■■□ 3.48
SHISA8-201ENST00000457093 NUP160Q12769 1436 aa36.79■■■■□ 3.48
SHISA8-201ENST00000457093 CEP170Q5SW79 1584 aa36.76■■■■□ 3.48
SHISA8-201ENST00000457093 ERCC6L2Q5T890 1561 aa36.6■■■■□ 3.45
SHISA8-201ENST00000457093 SHROOM2Q13796 1616 aa36.59■■■■□ 3.45
SHISA8-201ENST00000457093 KIF27Q86VH2 1401 aa36.59■■■■□ 3.45
SHISA8-201ENST00000457093 IGF1RP08069 1367 aa36.51■■■■□ 3.43
SHISA8-201ENST00000457093 JPH4Q96JJ6 628 aa36.5■■■■□ 3.43
SHISA8-201ENST00000457093 PRG4Q92954 1404 aaPredicted RBP36.45■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms