RNA–Protein interactions for RNA: ENST00000457079.1

LINC00885-201, long intergenic non-protein coding RNA 885, humanhuman

TSL 2 BASIC

Gene LINC00885, Length 1,828 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00885-201ENST00000457079 NISCHQ9Y2I1 1504 aa24.22■■□□□ 1.47
LINC00885-201ENST00000457079 CCDC180Q9P1Z9 1646 aa20.93■□□□□ 0.94
LINC00885-201ENST00000457079 ZCCHC6Q5VYS8 1495 aaKnown RBP20.41■□□□□ 0.86
LINC00885-201ENST00000457079 DCAF1Q9Y4B6 1507 aa20.01■□□□□ 0.79
LINC00885-201ENST00000457079 SHROOM4Q9ULL8 1493 aa19.93■□□□□ 0.78
LINC00885-201ENST00000457079 DCAF8L2P0C7V8 631 aa19.88■□□□□ 0.77
LINC00885-201ENST00000457079 MYO15BQ96JP2 1530 aa19.68■□□□□ 0.74
LINC00885-201ENST00000457079 ABCC9O60706 1549 aa19.67■□□□□ 0.74
LINC00885-201ENST00000457079 NACADO15069 1562 aa19.47■□□□□ 0.71
LINC00885-201ENST00000457079 SCRIBQ14160 1630 aa19.34■□□□□ 0.69
LINC00885-201ENST00000457079 SUPT5HO00267 1087 aaKnown RBP19.25■□□□□ 0.67
LINC00885-201ENST00000457079 RB1CC1Q8TDY2 1594 aa19.23■□□□□ 0.67
LINC00885-201ENST00000457079 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
LINC00885-201ENST00000457079 UNC13AQ9UPW8 1703 aa18.85■□□□□ 0.61
LINC00885-201ENST00000457079 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
LINC00885-201ENST00000457079 MROH2BQ7Z745 1585 aa18.74■□□□□ 0.59
LINC00885-201ENST00000457079 BICRAQ9NZM4 1560 aa18.73■□□□□ 0.59
LINC00885-201ENST00000457079 BAZ1AQ9NRL2 1556 aaPredicted RBP18.65■□□□□ 0.58
LINC00885-201ENST00000457079 PABPN1Q86U42 306 aaKnown RBP eCLIP18.6■□□□□ 0.57
LINC00885-201ENST00000457079 CHIC1Q5VXU3 224 aa18.58■□□□□ 0.57
LINC00885-201ENST00000457079 WIZO95785 1651 aa18.56■□□□□ 0.56
LINC00885-201ENST00000457079 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
LINC00885-201ENST00000457079 TOP2AP11388 1531 aaKnown RBP18.38■□□□□ 0.53
LINC00885-201ENST00000457079 PEG3Q9GZU2 1588 aa18.33■□□□□ 0.52
LINC00885-201ENST00000457079 SMARCA2P51531 1590 aa18.23■□□□□ 0.51
LINC00885-201ENST00000457079 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
LINC00885-201ENST00000457079 ATAD2BQ9ULI0 1458 aa18.22■□□□□ 0.51
LINC00885-201ENST00000457079 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
LINC00885-201ENST00000457079 BAZ1BQ9UIG0 1483 aaKnown RBP18.1■□□□□ 0.49
LINC00885-201ENST00000457079 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
LINC00885-201ENST00000457079 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
LINC00885-201ENST00000457079 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
LINC00885-201ENST00000457079 ABCC8Q09428 1581 aa17.91■□□□□ 0.46
LINC00885-201ENST00000457079 LOC105371045A0A1W2PR82 267 aa17.88■□□□□ 0.45
LINC00885-201ENST00000457079 CC2D2AQ9P2K1 1620 aa17.78■□□□□ 0.44
LINC00885-201ENST00000457079 FAM9AQ8IZU1 332 aaPredicted RBP17.76■□□□□ 0.43
LINC00885-201ENST00000457079 WRNQ14191 1432 aaPredicted RBP eCLIP17.75■□□□□ 0.43
LINC00885-201ENST00000457079 SYNJ1O43426 1573 aa17.69■□□□□ 0.42
LINC00885-201ENST00000457079 CFTRP13569 1480 aa17.68■□□□□ 0.42
LINC00885-201ENST00000457079 SOGA1O94964 1423 aa17.65■□□□□ 0.42
LINC00885-201ENST00000457079 EEA1Q15075 1411 aa17.58■□□□□ 0.41
LINC00885-201ENST00000457079 TOP2BQ02880 1626 aa17.57■□□□□ 0.4
LINC00885-201ENST00000457079 RUSC2Q8N2Y8 1516 aa17.56■□□□□ 0.4
LINC00885-201ENST00000457079 CADPSQ9ULU8 1353 aa17.56■□□□□ 0.4
LINC00885-201ENST00000457079 BIVM-ERCC5R4GMW8 1640 aa17.53■□□□□ 0.4
LINC00885-201ENST00000457079 EHMT2Q96KQ7 1210 aa17.51■□□□□ 0.39
LINC00885-201ENST00000457079 CUX1P39880 1505 aa17.51■□□□□ 0.39
LINC00885-201ENST00000457079 PRDM2Q13029 1718 aa17.48■□□□□ 0.39
LINC00885-201ENST00000457079 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
LINC00885-201ENST00000457079 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
LINC00885-201ENST00000457079 TNIKQ9UKE5 1360 aa17.37■□□□□ 0.37
LINC00885-201ENST00000457079 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
LINC00885-201ENST00000457079 FANCD2Q9BXW9 1451 aa17.37■□□□□ 0.37
LINC00885-201ENST00000457079 NESP48681 1621 aa17.36■□□□□ 0.37
LINC00885-201ENST00000457079 KIF21BO75037 1637 aa17.35■□□□□ 0.37
LINC00885-201ENST00000457079 CEP164Q9UPV0 1460 aa17.34■□□□□ 0.37
LINC00885-201ENST00000457079 LAMC3Q9Y6N6 1575 aa17.32■□□□□ 0.36
LINC00885-201ENST00000457079 CEP162Q5TB80 1403 aa17.31■□□□□ 0.36
LINC00885-201ENST00000457079 PCGF6Q9BYE7 350 aa17.27■□□□□ 0.36
LINC00885-201ENST00000457079 KIF27Q86VH2 1401 aa17.27■□□□□ 0.35
LINC00885-201ENST00000457079 FGD5Q6ZNL6 1462 aa17.26■□□□□ 0.35
LINC00885-201ENST00000457079 PRXQ9BXM0 1461 aa17.26■□□□□ 0.35
LINC00885-201ENST00000457079 RAPGEF2Q9Y4G8 1499 aa17.26■□□□□ 0.35
LINC00885-201ENST00000457079 UBTFP17480 764 aaKnown RBP17.24■□□□□ 0.35
LINC00885-201ENST00000457079 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
LINC00885-201ENST00000457079 TOPBP1Q92547 1522 aa17.21■□□□□ 0.35
LINC00885-201ENST00000457079 ERICH3Q5RHP9 1530 aa17.2■□□□□ 0.34
LINC00885-201ENST00000457079 TRIM26Q12899 539 aaPredicted RBP17.19■□□□□ 0.34
LINC00885-201ENST00000457079 CUX2O14529 1486 aa17.19■□□□□ 0.34
LINC00885-201ENST00000457079 PDS5BQ9NTI5 1447 aa17.18■□□□□ 0.34
LINC00885-201ENST00000457079 URB2Q14146 1524 aaKnown RBP17.17■□□□□ 0.34
LINC00885-201ENST00000457079 POLA1P09884 1462 aaPredicted RBP17.16■□□□□ 0.34
LINC00885-201ENST00000457079 IGF1RP08069 1367 aa17.13■□□□□ 0.33
LINC00885-201ENST00000457079 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
LINC00885-201ENST00000457079 CLIP1P30622 1438 aa17.11■□□□□ 0.33
LINC00885-201ENST00000457079 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
LINC00885-201ENST00000457079 KIF21AQ7Z4S6 1674 aa17.08■□□□□ 0.32
LINC00885-201ENST00000457079 PPARGC1BQ86YN6 1023 aaKnown RBP17.02■□□□□ 0.31
LINC00885-201ENST00000457079 CARMIL1Q5VZK9 1371 aa17.02■□□□□ 0.31
LINC00885-201ENST00000457079 WDR97A6NE52 1622 aa17.01■□□□□ 0.31
LINC00885-201ENST00000457079 VPS8Q8N3P4 1428 aa17■□□□□ 0.31
LINC00885-201ENST00000457079 HRCP23327 699 aa16.97■□□□□ 0.31
LINC00885-201ENST00000457079 MRC2Q9UBG0 1479 aa16.97■□□□□ 0.31
LINC00885-201ENST00000457079 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
LINC00885-201ENST00000457079 ABCA5Q8WWZ7 1642 aa16.95■□□□□ 0.3
LINC00885-201ENST00000457079 TARBP1Q13395 1621 aaKnown RBP16.93■□□□□ 0.3
LINC00885-201ENST00000457079 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
LINC00885-201ENST00000457079 RANGAP1P46060 587 aaPredicted RBP16.92■□□□□ 0.3
LINC00885-201ENST00000457079 CUL7Q14999 1698 aa16.9■□□□□ 0.3
LINC00885-201ENST00000457079 ARHGAP35Q9NRY4 1499 aa16.9■□□□□ 0.3
LINC00885-201ENST00000457079 GAPVD1Q14C86 1478 aa16.89■□□□□ 0.29
LINC00885-201ENST00000457079 WDR62O43379 1518 aa16.89■□□□□ 0.29
LINC00885-201ENST00000457079 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
LINC00885-201ENST00000457079 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
LINC00885-201ENST00000457079 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
LINC00885-201ENST00000457079 THOC2Q8NI27 1593 aaKnown RBP16.78■□□□□ 0.28
LINC00885-201ENST00000457079 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC00885-201ENST00000457079 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
LINC00885-201ENST00000457079 PBRM1Q86U86 1689 aa16.73■□□□□ 0.27
LINC00885-201ENST00000457079 APLP2Q06481 763 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms