RNA–Protein interactions for RNA: ENST00000457023.1

CAPN7-205, Transcript of calpain 7, humanhuman

TSL 3

Gene CAPN7, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-205ENST00000457023 NISCHQ9Y2I1 1504 aa63.08■■■■■ 7.69
CAPN7-205ENST00000457023 CCDC180Q9P1Z9 1646 aa56.47■■■■■ 6.63
CAPN7-205ENST00000457023 ABCC9O60706 1549 aa56.42■■■■■ 6.62
CAPN7-205ENST00000457023 RB1CC1Q8TDY2 1594 aa53.75■■■■■ 6.2
CAPN7-205ENST00000457023 NACADO15069 1562 aa53.44■■■■■ 6.15
CAPN7-205ENST00000457023 DCAF8L2P0C7V8 631 aa53.2■■■■■ 6.11
CAPN7-205ENST00000457023 DNAJC5BQ9UF47 199 aa52.99■■■■■ 6.07
CAPN7-205ENST00000457023 MYO15BQ96JP2 1530 aa52.81■■■■■ 6.04
CAPN7-205ENST00000457023 PABPN1Q86U42 306 aaKnown RBP eCLIP52.61■■■■■ 6.01
CAPN7-205ENST00000457023 UNC13AQ9UPW8 1703 aa52.43■■■■■ 5.98
CAPN7-205ENST00000457023 ZCCHC6Q5VYS8 1495 aaKnown RBP52.27■■■■■ 5.96
CAPN7-205ENST00000457023 BICRAQ9NZM4 1560 aa52.21■■■■■ 5.95
CAPN7-205ENST00000457023 DCAF1Q9Y4B6 1507 aa52.15■■■■■ 5.94
CAPN7-205ENST00000457023 SHROOM4Q9ULL8 1493 aa51.54■■■■■ 5.84
CAPN7-205ENST00000457023 SCRIBQ14160 1630 aa51.43■■■■■ 5.82
CAPN7-205ENST00000457023 CC2D2AQ9P2K1 1620 aa50.97■■■■■ 5.75
CAPN7-205ENST00000457023 EIF4G1Q04637 1599 aaKnown RBP50.89■■■■■ 5.74
CAPN7-205ENST00000457023 CECR2Q9BXF3 1484 aa50.84■■■■■ 5.73
CAPN7-205ENST00000457023 NCAPD3P42695 1498 aa49.41■■■■■ 5.5
CAPN7-205ENST00000457023 ATAD2BQ9ULI0 1458 aa49.23■■■■■ 5.47
CAPN7-205ENST00000457023 SMARCA4P51532 1647 aa49.12■■■■■ 5.45
CAPN7-205ENST00000457023 SMARCA2P51531 1590 aa49.05■■■■■ 5.44
CAPN7-205ENST00000457023 HMGXB3Q12766 1538 aa48.96■■■■■ 5.43
CAPN7-205ENST00000457023 BAZ1AQ9NRL2 1556 aaPredicted RBP48.93■■■■■ 5.42
CAPN7-205ENST00000457023 PEG3Q9GZU2 1588 aa48.71■■■■■ 5.39
CAPN7-205ENST00000457023 BAZ1BQ9UIG0 1483 aaKnown RBP48.69■■■■■ 5.39
CAPN7-205ENST00000457023 ERCC6Q03468 1493 aa48.68■■■■■ 5.38
CAPN7-205ENST00000457023 CUX2O14529 1486 aa48.63■■■■■ 5.38
CAPN7-205ENST00000457023 DNAJC5Q9H3Z4 198 aa48.6■■■■■ 5.37
CAPN7-205ENST00000457023 MROH2BQ7Z745 1585 aa48.59■■■■■ 5.37
CAPN7-205ENST00000457023 NESP48681 1621 aa48.51■■■■■ 5.36
CAPN7-205ENST00000457023 LAMC3Q9Y6N6 1575 aa48.18■■■■■ 5.3
CAPN7-205ENST00000457023 PDS5BQ9NTI5 1447 aa47.96■■■■■ 5.27
CAPN7-205ENST00000457023 THOC2Q8NI27 1593 aaKnown RBP47.96■■■■■ 5.27
CAPN7-205ENST00000457023 WIZO95785 1651 aa47.96■■■■■ 5.27
CAPN7-205ENST00000457023 CADPSQ9ULU8 1353 aa47.9■■■■■ 5.26
CAPN7-205ENST00000457023 KIF21AQ7Z4S6 1674 aa47.8■■■■■ 5.24
CAPN7-205ENST00000457023 RSF1Q96T23 1441 aaPredicted RBP47.67■■■■■ 5.22
CAPN7-205ENST00000457023 MRC2Q9UBG0 1479 aa47.49■■■■■ 5.19
CAPN7-205ENST00000457023 TOP2AP11388 1531 aaKnown RBP47.38■■■■■ 5.18
CAPN7-205ENST00000457023 WDR62O43379 1518 aa47.37■■■■■ 5.17
CAPN7-205ENST00000457023 CFTRP13569 1480 aa47.36■■■■■ 5.17
CAPN7-205ENST00000457023 CEP164Q9UPV0 1460 aa47.31■■■■■ 5.16
CAPN7-205ENST00000457023 FANCD2Q9BXW9 1451 aa47.29■■■■■ 5.16
CAPN7-205ENST00000457023 CCDC88BA6NC98 1476 aa46.91■■■■■ 5.1
CAPN7-205ENST00000457023 URB2Q14146 1524 aaKnown RBP46.9■■■■■ 5.1
CAPN7-205ENST00000457023 PRDM2Q13029 1718 aa46.69■■■■■ 5.06
CAPN7-205ENST00000457023 OSCARQ8IYS5 282 aa46.51■■■■■ 5.04
CAPN7-205ENST00000457023 TOPBP1Q92547 1522 aa46.4■■■■■ 5.02
CAPN7-205ENST00000457023 IFT140Q96RY7 1462 aa46.4■■■■■ 5.02
CAPN7-205ENST00000457023 TRIM41Q8WV44 630 aa46.39■■■■■ 5.02
CAPN7-205ENST00000457023 ABCC8Q09428 1581 aa46.35■■■■■ 5.01
CAPN7-205ENST00000457023 ZNF608Q9ULD9 1512 aaPredicted RBP46.3■■■■■ 5
CAPN7-205ENST00000457023 DNMBPQ6XZF7 1577 aa46.21■■■■■ 4.99
CAPN7-205ENST00000457023 EIF4G3O43432 1585 aaKnown RBP45.97■■■■■ 4.95
CAPN7-205ENST00000457023 TARBP1Q13395 1621 aaKnown RBP45.97■■■■■ 4.95
CAPN7-205ENST00000457023 POLA1P09884 1462 aaPredicted RBP45.93■■■■■ 4.94
CAPN7-205ENST00000457023 AQRO60306 1485 aaKnown RBP eCLIP45.93■■■■■ 4.943e-7■■■□□ 14.7
CAPN7-205ENST00000457023 RAD54L2Q9Y4B4 1467 aa45.78■■■■■ 4.92
CAPN7-205ENST00000457023 SOGA1O94964 1423 aa45.77■■■■■ 4.92
CAPN7-205ENST00000457023 RIMBP3CA6NJZ7 1639 aa45.75■■■■■ 4.91
CAPN7-205ENST00000457023 RIMBP3BA6NNM3 1639 aa45.75■■■■■ 4.91
CAPN7-205ENST00000457023 RIMBP3Q9UFD9 1639 aa45.75■■■■■ 4.91
CAPN7-205ENST00000457023 TDRD9Q8NDG6 1382 aaKnown RBP45.67■■■■■ 4.9
CAPN7-205ENST00000457023 ARHGEF11O15085 1522 aa45.65■■■■■ 4.9
CAPN7-205ENST00000457023 FGD5Q6ZNL6 1462 aa45.64■■■■■ 4.9
CAPN7-205ENST00000457023 CUX1P39880 1505 aa45.63■■■■■ 4.9
CAPN7-205ENST00000457023 SUPT5HO00267 1087 aaKnown RBP45.58■■■■■ 4.89
CAPN7-205ENST00000457023 FBLN2P98095 1184 aa45.58■■■■■ 4.89
CAPN7-205ENST00000457023 CHD1O14646 1710 aa45.57■■■■■ 4.89
CAPN7-205ENST00000457023 WDR97A6NE52 1622 aa45.52■■■■■ 4.88
CAPN7-205ENST00000457023 SNAPC4Q5SXM2 1469 aa45.4■■■■■ 4.86
CAPN7-205ENST00000457023 CYB5RLQ6IPT4 315 aa45.38■■■■■ 4.86
CAPN7-205ENST00000457023 GRIN2BQ13224 1484 aa45.34■■■■■ 4.85
CAPN7-205ENST00000457023 MAGI1Q96QZ7 1491 aaPredicted RBP45.31■■■■■ 4.84
CAPN7-205ENST00000457023 CHMP7Q8WUX9 453 aaPredicted RBP45.31■■■■■ 4.84
CAPN7-205ENST00000457023 ARAP1Q96P48 1450 aa45.22■■■■■ 4.83
CAPN7-205ENST00000457023 GAPVD1Q14C86 1478 aa45.19■■■■■ 4.82
CAPN7-205ENST00000457023 SYNJ2O15056 1496 aa45.17■■■■■ 4.82
CAPN7-205ENST00000457023 ABCA10Q8WWZ4 1543 aa45.17■■■■■ 4.82
CAPN7-205ENST00000457023 CLASP1Q7Z460 1538 aa45.16■■■■■ 4.82
CAPN7-205ENST00000457023 SYNJ1O43426 1573 aa45.11■■■■■ 4.81
CAPN7-205ENST00000457023 PBRM1Q86U86 1689 aa45.03■■■■■ 4.8
CAPN7-205ENST00000457023 ABCA5Q8WWZ7 1642 aa45.03■■■■■ 4.8
CAPN7-205ENST00000457023 WRNQ14191 1432 aaPredicted RBP eCLIP45.01■■■■■ 4.8
CAPN7-205ENST00000457023 TOP2BQ02880 1626 aa44.91■■■■■ 4.78
CAPN7-205ENST00000457023 BIVM-ERCC5R4GMW8 1640 aa44.89■■■■■ 4.78
CAPN7-205ENST00000457023 TRHP20396 242 aaPredicted RBP44.8■■■■■ 4.76
CAPN7-205ENST00000457023 GRIN2AQ12879 1464 aa44.73■■■■■ 4.75
CAPN7-205ENST00000457023 ADAMTS12P58397 1594 aa44.66■■■■■ 4.74
CAPN7-205ENST00000457023 FHAD1B1AJZ9 1412 aa44.64■■■■■ 4.74
CAPN7-205ENST00000457023 NUP160Q12769 1436 aa44.62■■■■■ 4.73
CAPN7-205ENST00000457023 ERICH3Q5RHP9 1530 aa44.6■■■■■ 4.73
CAPN7-205ENST00000457023 CEP170Q5SW79 1584 aa44.55■■■■■ 4.72
CAPN7-205ENST00000457023 ERCC6L2Q5T890 1561 aa44.44■■■■■ 4.71
CAPN7-205ENST00000457023 SHROOM2Q13796 1616 aa44.36■■■■■ 4.69
CAPN7-205ENST00000457023 JPH4Q96JJ6 628 aa44.23■■■■■ 4.67
CAPN7-205ENST00000457023 PRG4Q92954 1404 aaPredicted RBP44.17■■■■■ 4.66
CAPN7-205ENST00000457023 IGF1RP08069 1367 aa44.14■■■■■ 4.66
CAPN7-205ENST00000457023 KIF27Q86VH2 1401 aa44.07■■■■■ 4.65
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms