RNA–Protein interactions for RNA: ENST00000457000.1

AC004947.1-202, humanhuman

TSL 4 BASIC

Gene AC004947.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004947.1-202ENST00000457000 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.92
AC004947.1-202ENST00000457000 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
AC004947.1-202ENST00000457000 ZCCHC6Q5VYS8 1495 aaKnown RBP17.57■□□□□ 0.4
AC004947.1-202ENST00000457000 DCAF1Q9Y4B6 1507 aa17.3■□□□□ 0.36
AC004947.1-202ENST00000457000 SHROOM4Q9ULL8 1493 aa17.04■□□□□ 0.32
AC004947.1-202ENST00000457000 MYO15BQ96JP2 1530 aa17.01■□□□□ 0.31
AC004947.1-202ENST00000457000 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
AC004947.1-202ENST00000457000 NACADO15069 1562 aa16.78■□□□□ 0.28
AC004947.1-202ENST00000457000 ABCC9O60706 1549 aa16.71■□□□□ 0.27
AC004947.1-202ENST00000457000 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
AC004947.1-202ENST00000457000 RB1CC1Q8TDY2 1594 aa16.55■□□□□ 0.24
AC004947.1-202ENST00000457000 SUPT5HO00267 1087 aaKnown RBP16.52■□□□□ 0.24
AC004947.1-202ENST00000457000 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
AC004947.1-202ENST00000457000 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
AC004947.1-202ENST00000457000 CECR2Q9BXF3 1484 aa16.09■□□□□ 0.17
AC004947.1-202ENST00000457000 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
AC004947.1-202ENST00000457000 MROH2BQ7Z745 1585 aa16.06■□□□□ 0.16
AC004947.1-202ENST00000457000 BICRAQ9NZM4 1560 aa16.02■□□□□ 0.16
AC004947.1-202ENST00000457000 CHIC1Q5VXU3 224 aa16.02■□□□□ 0.16
AC004947.1-202ENST00000457000 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
AC004947.1-202ENST00000457000 WIZO95785 1651 aa15.97■□□□□ 0.15
AC004947.1-202ENST00000457000 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
AC004947.1-202ENST00000457000 PEG3Q9GZU2 1588 aa15.81■□□□□ 0.12
AC004947.1-202ENST00000457000 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
AC004947.1-202ENST00000457000 EIF4G1Q04637 1599 aaKnown RBP15.71■□□□□ 0.11
AC004947.1-202ENST00000457000 SMARCA2P51531 1590 aa15.7■□□□□ 0.1
AC004947.1-202ENST00000457000 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
AC004947.1-202ENST00000457000 ATAD2BQ9ULI0 1458 aa15.6■□□□□ 0.09
AC004947.1-202ENST00000457000 TRIM41Q8WV44 630 aa15.57■□□□□ 0.08
AC004947.1-202ENST00000457000 BAZ1BQ9UIG0 1483 aaKnown RBP15.54■□□□□ 0.08
AC004947.1-202ENST00000457000 HMGXB3Q12766 1538 aa15.49■□□□□ 0.07
AC004947.1-202ENST00000457000 NCAPD3P42695 1498 aa15.45■□□□□ 0.06
AC004947.1-202ENST00000457000 ABCC8Q09428 1581 aa15.37■□□□□ 0.05
AC004947.1-202ENST00000457000 LOC105371045A0A1W2PR82 267 aa15.35■□□□□ 0.05
AC004947.1-202ENST00000457000 WRNQ14191 1432 aaPredicted RBP eCLIP15.28■□□□□ 0.04
AC004947.1-202ENST00000457000 EEA1Q15075 1411 aa15.27■□□□□ 0.04
AC004947.1-202ENST00000457000 PRDM2Q13029 1718 aa15.23■□□□□ 0.03
AC004947.1-202ENST00000457000 FAM9AQ8IZU1 332 aaPredicted RBP15.22■□□□□ 0.03
AC004947.1-202ENST00000457000 SYNJ1O43426 1573 aa15.22■□□□□ 0.03
AC004947.1-202ENST00000457000 CC2D2AQ9P2K1 1620 aa15.21■□□□□ 0.02
AC004947.1-202ENST00000457000 TOP2BQ02880 1626 aa15.17■□□□□ 0.02
AC004947.1-202ENST00000457000 BIVM-ERCC5R4GMW8 1640 aa15.17■□□□□ 0.02
AC004947.1-202ENST00000457000 CFTRP13569 1480 aa15.17■□□□□ 0.02
AC004947.1-202ENST00000457000 SOGA1O94964 1423 aa15.12■□□□□ 0.01
AC004947.1-202ENST00000457000 KIF21BO75037 1637 aa15.06■□□□□ 0
AC004947.1-202ENST00000457000 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
AC004947.1-202ENST00000457000 RUSC2Q8N2Y8 1516 aa15.04■□□□□ -0
AC004947.1-202ENST00000457000 GOLGA3Q08378 1498 aa15.03■□□□□ -0
AC004947.1-202ENST00000457000 TNIKQ9UKE5 1360 aa15.03■□□□□ -0
AC004947.1-202ENST00000457000 CADPSQ9ULU8 1353 aa15.03■□□□□ -0
AC004947.1-202ENST00000457000 CUX1P39880 1505 aa15.02■□□□□ -0
AC004947.1-202ENST00000457000 CEP164Q9UPV0 1460 aa15.01□□□□□ -0.01
AC004947.1-202ENST00000457000 TRIM26Q12899 539 aaPredicted RBP14.97□□□□□ -0.01
AC004947.1-202ENST00000457000 PCGF6Q9BYE7 350 aa14.97□□□□□ -0.01
AC004947.1-202ENST00000457000 CEP162Q5TB80 1403 aa14.95□□□□□ -0.02
AC004947.1-202ENST00000457000 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
AC004947.1-202ENST00000457000 ERICH3Q5RHP9 1530 aa14.92□□□□□ -0.02
AC004947.1-202ENST00000457000 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
AC004947.1-202ENST00000457000 KIF27Q86VH2 1401 aa14.89□□□□□ -0.03
AC004947.1-202ENST00000457000 FANCD2Q9BXW9 1451 aa14.88□□□□□ -0.03
AC004947.1-202ENST00000457000 UBTFP17480 764 aaKnown RBP14.86□□□□□ -0.03
AC004947.1-202ENST00000457000 PRXQ9BXM0 1461 aa14.86□□□□□ -0.03
AC004947.1-202ENST00000457000 DNMBPQ6XZF7 1577 aa14.85□□□□□ -0.03
AC004947.1-202ENST00000457000 RAPGEF2Q9Y4G8 1499 aa14.83□□□□□ -0.03
AC004947.1-202ENST00000457000 HRCP23327 699 aa14.83□□□□□ -0.04
AC004947.1-202ENST00000457000 FGD5Q6ZNL6 1462 aa14.81□□□□□ -0.04
AC004947.1-202ENST00000457000 CLIP1P30622 1438 aa14.77□□□□□ -0.04
AC004947.1-202ENST00000457000 NESP48681 1621 aa14.77□□□□□ -0.05
AC004947.1-202ENST00000457000 TOPBP1Q92547 1522 aa14.76□□□□□ -0.05
AC004947.1-202ENST00000457000 CUX2O14529 1486 aa14.76□□□□□ -0.05
AC004947.1-202ENST00000457000 PDS5BQ9NTI5 1447 aa14.74□□□□□ -0.05
AC004947.1-202ENST00000457000 ABCA10Q8WWZ4 1543 aa14.71□□□□□ -0.05
AC004947.1-202ENST00000457000 VPS8Q8N3P4 1428 aa14.71□□□□□ -0.05
AC004947.1-202ENST00000457000 POLA1P09884 1462 aaPredicted RBP14.69□□□□□ -0.06
AC004947.1-202ENST00000457000 WDR97A6NE52 1622 aa14.69□□□□□ -0.06
AC004947.1-202ENST00000457000 IGF1RP08069 1367 aa14.68□□□□□ -0.06
AC004947.1-202ENST00000457000 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
AC004947.1-202ENST00000457000 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
AC004947.1-202ENST00000457000 CUL7Q14999 1698 aa14.65□□□□□ -0.06
AC004947.1-202ENST00000457000 CARMIL1Q5VZK9 1371 aa14.62□□□□□ -0.07
AC004947.1-202ENST00000457000 RAD54L2Q9Y4B4 1467 aa14.61□□□□□ -0.07
AC004947.1-202ENST00000457000 ARAP1Q96P48 1450 aa14.6□□□□□ -0.07
AC004947.1-202ENST00000457000 ABCA5Q8WWZ7 1642 aa14.59□□□□□ -0.07
AC004947.1-202ENST00000457000 ZEB1P37275 1124 aaPredicted RBP14.58□□□□□ -0.08
AC004947.1-202ENST00000457000 DNAJC5BQ9UF47 199 aa14.57□□□□□ -0.08
AC004947.1-202ENST00000457000 PPARGC1BQ86YN6 1023 aaKnown RBP14.55□□□□□ -0.08
AC004947.1-202ENST00000457000 MRC2Q9UBG0 1479 aa14.55□□□□□ -0.08
AC004947.1-202ENST00000457000 ARHGAP35Q9NRY4 1499 aa14.54□□□□□ -0.08
AC004947.1-202ENST00000457000 TARBP1Q13395 1621 aaKnown RBP14.54□□□□□ -0.08
AC004947.1-202ENST00000457000 CTTNBP2Q8WZ74 1663 aa14.53□□□□□ -0.08
AC004947.1-202ENST00000457000 APLP2Q06481 763 aa14.52□□□□□ -0.09
AC004947.1-202ENST00000457000 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
AC004947.1-202ENST00000457000 EFCAB5A4FU69 1503 aa14.49□□□□□ -0.09
AC004947.1-202ENST00000457000 WDR62O43379 1518 aa14.48□□□□□ -0.09
AC004947.1-202ENST00000457000 MAP3K1Q13233 1512 aa14.46□□□□□ -0.09
AC004947.1-202ENST00000457000 PBRM1Q86U86 1689 aa14.46□□□□□ -0.09
AC004947.1-202ENST00000457000 RANGAP1P46060 587 aaPredicted RBP14.44□□□□□ -0.1
AC004947.1-202ENST00000457000 FHAD1B1AJZ9 1412 aa14.43□□□□□ -0.1
AC004947.1-202ENST00000457000 TDRD9Q8NDG6 1382 aaKnown RBP14.42□□□□□ -0.1
AC004947.1-202ENST00000457000 IFT140Q96RY7 1462 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms