RNA–Protein interactions for RNA: ENST00000456872.5

TSEN34-206, Transcript of tRNA splicing endonuclease subunit 34, humanhuman

TSL 2

Gene TSEN34, Length 853 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN34-206ENST00000456872 NISCHQ9Y2I1 1504 aa60.97■■■■■ 7.35
TSEN34-206ENST00000456872 CCDC180Q9P1Z9 1646 aa54.22■■■■■ 6.27
TSEN34-206ENST00000456872 ABCC9O60706 1549 aa53.19■■■■■ 6.11
TSEN34-206ENST00000456872 RB1CC1Q8TDY2 1594 aa51.04■■■■■ 5.76
TSEN34-206ENST00000456872 NACADO15069 1562 aa50.96■■■■■ 5.75
TSEN34-206ENST00000456872 DCAF8L2P0C7V8 631 aa50.93■■■■■ 5.74
TSEN34-206ENST00000456872 ZCCHC6Q5VYS8 1495 aaKnown RBP50.78■■■■■ 5.72
TSEN34-206ENST00000456872 MYO15BQ96JP2 1530 aa50.6■■■■■ 5.69
TSEN34-206ENST00000456872 DCAF1Q9Y4B6 1507 aa50.39■■■■■ 5.66
TSEN34-206ENST00000456872 UNC13AQ9UPW8 1703 aa50.05■■■■■ 5.6
TSEN34-206ENST00000456872 PABPN1Q86U42 306 aaKnown RBP eCLIP49.69■■■■■ 5.55
TSEN34-206ENST00000456872 BICRAQ9NZM4 1560 aa49.63■■■■■ 5.54
TSEN34-206ENST00000456872 SCRIBQ14160 1630 aa49.53■■■■■ 5.52
TSEN34-206ENST00000456872 DNAJC5BQ9UF47 199 aa48.96■■■■■ 5.43
TSEN34-206ENST00000456872 SHROOM4Q9ULL8 1493 aa48.9■■■■■ 5.42
TSEN34-206ENST00000456872 EIF4G1Q04637 1599 aaKnown RBP48.26■■■■■ 5.32
TSEN34-206ENST00000456872 CC2D2AQ9P2K1 1620 aa48.11■■■■■ 5.29
TSEN34-206ENST00000456872 CECR2Q9BXF3 1484 aa47.75■■■■■ 5.23
TSEN34-206ENST00000456872 SMARCA4P51532 1647 aa47.35■■■■■ 5.17
TSEN34-206ENST00000456872 BAZ1AQ9NRL2 1556 aaPredicted RBP47.22■■■■■ 5.15
TSEN34-206ENST00000456872 ATAD2BQ9ULI0 1458 aa47.1■■■■■ 5.13
TSEN34-206ENST00000456872 MROH2BQ7Z745 1585 aa47.05■■■■■ 5.12
TSEN34-206ENST00000456872 NCAPD3P42695 1498 aa47.04■■■■■ 5.12
TSEN34-206ENST00000456872 SMARCA2P51531 1590 aa46.97■■■■■ 5.11
TSEN34-206ENST00000456872 PEG3Q9GZU2 1588 aa46.86■■■■■ 5.09
TSEN34-206ENST00000456872 HMGXB3Q12766 1538 aa46.8■■■■■ 5.08
TSEN34-206ENST00000456872 BAZ1BQ9UIG0 1483 aaKnown RBP46.66■■■■■ 5.06
TSEN34-206ENST00000456872 WIZO95785 1651 aa46.55■■■■■ 5.04
TSEN34-206ENST00000456872 RSF1Q96T23 1441 aaPredicted RBP46.44■■■■■ 5.02
TSEN34-206ENST00000456872 NESP48681 1621 aa46.05■■■■■ 4.96
TSEN34-206ENST00000456872 TOP2AP11388 1531 aaKnown RBP45.98■■■■■ 4.95
TSEN34-206ENST00000456872 LAMC3Q9Y6N6 1575 aa45.8■■■■■ 4.92
TSEN34-206ENST00000456872 ERCC6Q03468 1493 aa45.75■■■■■ 4.91
TSEN34-206ENST00000456872 CADPSQ9ULU8 1353 aa45.66■■■■■ 4.9
TSEN34-206ENST00000456872 KIF21AQ7Z4S6 1674 aa45.5■■■■■ 4.87
TSEN34-206ENST00000456872 CCDC88BA6NC98 1476 aa45.47■■■■■ 4.87
TSEN34-206ENST00000456872 PDS5BQ9NTI5 1447 aa45.45■■■■■ 4.87
TSEN34-206ENST00000456872 CFTRP13569 1480 aa45.4■■■■■ 4.86
TSEN34-206ENST00000456872 THOC2Q8NI27 1593 aaKnown RBP45.34■■■■■ 4.85
TSEN34-206ENST00000456872 CUX2O14529 1486 aa45.29■■■■■ 4.84
TSEN34-206ENST00000456872 SUPT5HO00267 1087 aaKnown RBP45.17■■■■■ 4.82
TSEN34-206ENST00000456872 FANCD2Q9BXW9 1451 aa45.17■■■■■ 4.82
TSEN34-206ENST00000456872 CEP164Q9UPV0 1460 aa45.09■■■■■ 4.81
TSEN34-206ENST00000456872 PRDM2Q13029 1718 aa45.09■■■■■ 4.81
TSEN34-206ENST00000456872 MRC2Q9UBG0 1479 aa45.05■■■■■ 4.8
TSEN34-206ENST00000456872 WDR62O43379 1518 aa44.94■■■■■ 4.78
TSEN34-206ENST00000456872 URB2Q14146 1524 aaKnown RBP44.77■■■■■ 4.76
TSEN34-206ENST00000456872 TOPBP1Q92547 1522 aa44.45■■■■■ 4.71
TSEN34-206ENST00000456872 DNMBPQ6XZF7 1577 aa44.38■■■■■ 4.69
TSEN34-206ENST00000456872 ABCC8Q09428 1581 aa44.32■■■■■ 4.69
TSEN34-206ENST00000456872 CUX1P39880 1505 aa44.14■■■■■ 4.66
TSEN34-206ENST00000456872 IFT140Q96RY7 1462 aa44.13■■■■■ 4.65
TSEN34-206ENST00000456872 POLA1P09884 1462 aaPredicted RBP44.08■■■■■ 4.65
TSEN34-206ENST00000456872 ZNF608Q9ULD9 1512 aaPredicted RBP44.05■■■■■ 4.64
TSEN34-206ENST00000456872 DNAJC5Q9H3Z4 198 aa44.03■■■■■ 4.64
TSEN34-206ENST00000456872 TARBP1Q13395 1621 aaKnown RBP44.02■■■■■ 4.64
TSEN34-206ENST00000456872 FGD5Q6ZNL6 1462 aa43.96■■■■■ 4.63
TSEN34-206ENST00000456872 RAD54L2Q9Y4B4 1467 aa43.92■■■■■ 4.62
TSEN34-206ENST00000456872 EIF4G3O43432 1585 aaKnown RBP43.85■■■■■ 4.61
TSEN34-206ENST00000456872 SOGA1O94964 1423 aa43.85■■■■■ 4.61
TSEN34-206ENST00000456872 AQRO60306 1485 aaKnown RBP eCLIP43.76■■■■■ 4.65e-6■■■■□ 24
TSEN34-206ENST00000456872 SYNJ1O43426 1573 aa43.74■■■■■ 4.59
TSEN34-206ENST00000456872 WRNQ14191 1432 aaPredicted RBP eCLIP43.73■■■■■ 4.59
TSEN34-206ENST00000456872 BIVM-ERCC5R4GMW8 1640 aa43.7■■■■■ 4.59
TSEN34-206ENST00000456872 TOP2BQ02880 1626 aa43.69■■■■■ 4.58
TSEN34-206ENST00000456872 TDRD9Q8NDG6 1382 aaKnown RBP43.66■■■■■ 4.58
TSEN34-206ENST00000456872 WDR97A6NE52 1622 aa43.65■■■■■ 4.58
TSEN34-206ENST00000456872 ABCA10Q8WWZ4 1543 aa43.5■■■■■ 4.55
TSEN34-206ENST00000456872 ABCA5Q8WWZ7 1642 aa43.38■■■■■ 4.54
TSEN34-206ENST00000456872 OSCARQ8IYS5 282 aa43.38■■■■■ 4.53
TSEN34-206ENST00000456872 GAPVD1Q14C86 1478 aa43.35■■■■■ 4.53
TSEN34-206ENST00000456872 CHD1O14646 1710 aa43.34■■■■■ 4.53
TSEN34-206ENST00000456872 SNAPC4Q5SXM2 1469 aa43.34■■■■■ 4.53
TSEN34-206ENST00000456872 GRIN2BQ13224 1484 aa43.33■■■■■ 4.53
TSEN34-206ENST00000456872 PBRM1Q86U86 1689 aa43.33■■■■■ 4.53
TSEN34-206ENST00000456872 MAGI1Q96QZ7 1491 aaPredicted RBP43.22■■■■■ 4.51
TSEN34-206ENST00000456872 FBLN2P98095 1184 aa43.18■■■■■ 4.5
TSEN34-206ENST00000456872 SYNJ2O15056 1496 aa43.06■■■■■ 4.48
TSEN34-206ENST00000456872 CHMP7Q8WUX9 453 aaPredicted RBP43.01■■■■■ 4.48
TSEN34-206ENST00000456872 ADAMTS12P58397 1594 aa42.97■■■■■ 4.47
TSEN34-206ENST00000456872 ERICH3Q5RHP9 1530 aa42.95■■■■■ 4.47
TSEN34-206ENST00000456872 CLASP1Q7Z460 1538 aa42.84■■■■■ 4.45
TSEN34-206ENST00000456872 FHAD1B1AJZ9 1412 aa42.82■■■■■ 4.45
TSEN34-206ENST00000456872 RIMBP3CA6NJZ7 1639 aa42.82■■■■■ 4.44
TSEN34-206ENST00000456872 RIMBP3BA6NNM3 1639 aa42.82■■■■■ 4.44
TSEN34-206ENST00000456872 RIMBP3Q9UFD9 1639 aa42.82■■■■■ 4.44
TSEN34-206ENST00000456872 GRIN2AQ12879 1464 aa42.81■■■■■ 4.44
TSEN34-206ENST00000456872 KIF27Q86VH2 1401 aa42.8■■■■■ 4.44
TSEN34-206ENST00000456872 ARHGEF11O15085 1522 aa42.78■■■■■ 4.44
TSEN34-206ENST00000456872 IGF1RP08069 1367 aa42.7■■■■■ 4.43
TSEN34-206ENST00000456872 CEP170Q5SW79 1584 aa42.66■■■■■ 4.42
TSEN34-206ENST00000456872 NUP160Q12769 1436 aa42.63■■■■■ 4.41
TSEN34-206ENST00000456872 TRIM41Q8WV44 630 aa42.61■■■■■ 4.41
TSEN34-206ENST00000456872 CUL7Q14999 1698 aa42.56■■■■■ 4.4
TSEN34-206ENST00000456872 RUSC2Q8N2Y8 1516 aa42.56■■■■■ 4.4
TSEN34-206ENST00000456872 ARAP1Q96P48 1450 aa42.46■■■■■ 4.39
TSEN34-206ENST00000456872 CARMIL1Q5VZK9 1371 aa42.4■■■■■ 4.38
TSEN34-206ENST00000456872 CYB5RLQ6IPT4 315 aa42.35■■■■■ 4.37
TSEN34-206ENST00000456872 SHROOM2Q13796 1616 aa42.35■■■■■ 4.37
TSEN34-206ENST00000456872 ERCC6L2Q5T890 1561 aa42.33■■■■■ 4.37
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms