RNA–Protein interactions for RNA: ENST00000456853.1

RBMS3-210, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene RBMS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-210ENST00000456853 NISCHQ9Y2I1 1504 aa30.48■■■□□ 2.47
RBMS3-210ENST00000456853 ABCC9O60706 1549 aa27.64■■■□□ 2.01
RBMS3-210ENST00000456853 CCDC180Q9P1Z9 1646 aa27.33■■□□□ 1.97
RBMS3-210ENST00000456853 RB1CC1Q8TDY2 1594 aa26.11■■□□□ 1.77
RBMS3-210ENST00000456853 DNAJC5BQ9UF47 199 aa26.06■■□□□ 1.76
RBMS3-210ENST00000456853 DCAF8L2P0C7V8 631 aa25.95■■□□□ 1.74
RBMS3-210ENST00000456853 NACADO15069 1562 aa25.87■■□□□ 1.73
RBMS3-210ENST00000456853 PABPN1Q86U42 306 aaKnown RBP eCLIP25.75■■□□□ 1.71
RBMS3-210ENST00000456853 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
RBMS3-210ENST00000456853 BICRAQ9NZM4 1560 aa25.42■■□□□ 1.66
RBMS3-210ENST00000456853 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
RBMS3-210ENST00000456853 ZCCHC6Q5VYS8 1495 aaKnown RBP25.23■■□□□ 1.63
RBMS3-210ENST00000456853 SCRIBQ14160 1630 aa25.07■■□□□ 1.6
RBMS3-210ENST00000456853 DCAF1Q9Y4B6 1507 aa25.06■■□□□ 1.6
RBMS3-210ENST00000456853 CC2D2AQ9P2K1 1620 aa24.9■■□□□ 1.58
RBMS3-210ENST00000456853 SHROOM4Q9ULL8 1493 aa24.86■■□□□ 1.57
RBMS3-210ENST00000456853 CECR2Q9BXF3 1484 aa24.84■■□□□ 1.57
RBMS3-210ENST00000456853 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
RBMS3-210ENST00000456853 NCAPD3P42695 1498 aa23.89■■□□□ 1.42
RBMS3-210ENST00000456853 DNAJC5Q9H3Z4 198 aa23.89■■□□□ 1.41
RBMS3-210ENST00000456853 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
RBMS3-210ENST00000456853 SMARCA4P51532 1647 aa23.82■■□□□ 1.4
RBMS3-210ENST00000456853 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
RBMS3-210ENST00000456853 SMARCA2P51531 1590 aa23.74■■□□□ 1.39
RBMS3-210ENST00000456853 NESP48681 1621 aa23.73■■□□□ 1.39
RBMS3-210ENST00000456853 CUX2O14529 1486 aa23.7■■□□□ 1.38
RBMS3-210ENST00000456853 HMGXB3Q12766 1538 aa23.7■■□□□ 1.38
RBMS3-210ENST00000456853 BAZ1AQ9NRL2 1556 aaPredicted RBP23.64■■□□□ 1.37
RBMS3-210ENST00000456853 BAZ1BQ9UIG0 1483 aaKnown RBP23.64■■□□□ 1.37
RBMS3-210ENST00000456853 MROH2BQ7Z745 1585 aa23.56■■□□□ 1.36
RBMS3-210ENST00000456853 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
RBMS3-210ENST00000456853 THOC2Q8NI27 1593 aaKnown RBP23.42■■□□□ 1.34
RBMS3-210ENST00000456853 LAMC3Q9Y6N6 1575 aa23.38■■□□□ 1.33
RBMS3-210ENST00000456853 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
RBMS3-210ENST00000456853 WIZO95785 1651 aa23.29■■□□□ 1.32
RBMS3-210ENST00000456853 PDS5BQ9NTI5 1447 aa23.25■■□□□ 1.31
RBMS3-210ENST00000456853 CADPSQ9ULU8 1353 aa23.2■■□□□ 1.3
RBMS3-210ENST00000456853 MRC2Q9UBG0 1479 aa23.1■■□□□ 1.29
RBMS3-210ENST00000456853 WDR62O43379 1518 aa23.03■■□□□ 1.28
RBMS3-210ENST00000456853 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
RBMS3-210ENST00000456853 CEP164Q9UPV0 1460 aa22.99■■□□□ 1.27
RBMS3-210ENST00000456853 FANCD2Q9BXW9 1451 aa22.97■■□□□ 1.27
RBMS3-210ENST00000456853 TRIM41Q8WV44 630 aa22.94■■□□□ 1.26
RBMS3-210ENST00000456853 TOP2AP11388 1531 aaKnown RBP22.9■■□□□ 1.26
RBMS3-210ENST00000456853 CFTRP13569 1480 aa22.9■■□□□ 1.26
RBMS3-210ENST00000456853 URB2Q14146 1524 aaKnown RBP22.82■■□□□ 1.24
RBMS3-210ENST00000456853 CCDC88BA6NC98 1476 aa22.69■■□□□ 1.22
RBMS3-210ENST00000456853 PRDM2Q13029 1718 aa22.66■■□□□ 1.22
RBMS3-210ENST00000456853 OSCARQ8IYS5 282 aa22.65■■□□□ 1.22
RBMS3-210ENST00000456853 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
RBMS3-210ENST00000456853 TOPBP1Q92547 1522 aa22.53■■□□□ 1.2
RBMS3-210ENST00000456853 IFT140Q96RY7 1462 aa22.51■■□□□ 1.19
RBMS3-210ENST00000456853 RIMBP3CA6NJZ7 1639 aa22.43■■□□□ 1.18
RBMS3-210ENST00000456853 RIMBP3BA6NNM3 1639 aa22.43■■□□□ 1.18
RBMS3-210ENST00000456853 RIMBP3Q9UFD9 1639 aa22.43■■□□□ 1.18
RBMS3-210ENST00000456853 EIF4G3O43432 1585 aaKnown RBP22.42■■□□□ 1.18
RBMS3-210ENST00000456853 DNMBPQ6XZF7 1577 aa22.41■■□□□ 1.18
RBMS3-210ENST00000456853 AQRO60306 1485 aaKnown RBP eCLIP22.37■■□□□ 1.17
RBMS3-210ENST00000456853 ABCC8Q09428 1581 aa22.35■■□□□ 1.17
RBMS3-210ENST00000456853 ARHGEF11O15085 1522 aa22.34■■□□□ 1.17
RBMS3-210ENST00000456853 TARBP1Q13395 1621 aaKnown RBP22.33■■□□□ 1.16
RBMS3-210ENST00000456853 POLA1P09884 1462 aaPredicted RBP22.3■■□□□ 1.16
RBMS3-210ENST00000456853 CHD1O14646 1710 aa22.3■■□□□ 1.16
RBMS3-210ENST00000456853 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
RBMS3-210ENST00000456853 FBLN2P98095 1184 aa22.28■■□□□ 1.16
RBMS3-210ENST00000456853 CYB5RLQ6IPT4 315 aa22.23■■□□□ 1.15
RBMS3-210ENST00000456853 TDRD9Q8NDG6 1382 aaKnown RBP22.23■■□□□ 1.15
RBMS3-210ENST00000456853 SOGA1O94964 1423 aa22.19■■□□□ 1.14
RBMS3-210ENST00000456853 FGD5Q6ZNL6 1462 aa22.16■■□□□ 1.14
RBMS3-210ENST00000456853 CUX1P39880 1505 aa22.13■■□□□ 1.13
RBMS3-210ENST00000456853 ARAP1Q96P48 1450 aa22.12■■□□□ 1.13
RBMS3-210ENST00000456853 SNAPC4Q5SXM2 1469 aa22.11■■□□□ 1.13
RBMS3-210ENST00000456853 SUPT5HO00267 1087 aaKnown RBP22.02■■□□□ 1.12
RBMS3-210ENST00000456853 TRHP20396 242 aaPredicted RBP22.02■■□□□ 1.12
RBMS3-210ENST00000456853 CHMP7Q8WUX9 453 aaPredicted RBP22.01■■□□□ 1.11
RBMS3-210ENST00000456853 CLASP1Q7Z460 1538 aa21.98■■□□□ 1.11
RBMS3-210ENST00000456853 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
RBMS3-210ENST00000456853 WDR97A6NE52 1622 aa21.97■■□□□ 1.11
RBMS3-210ENST00000456853 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
RBMS3-210ENST00000456853 SYNJ1O43426 1573 aa21.93■■□□□ 1.1
RBMS3-210ENST00000456853 PBRM1Q86U86 1689 aa21.93■■□□□ 1.1
RBMS3-210ENST00000456853 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
RBMS3-210ENST00000456853 GAPVD1Q14C86 1478 aa21.91■■□□□ 1.1
RBMS3-210ENST00000456853 ABCA5Q8WWZ7 1642 aa21.84■■□□□ 1.09
RBMS3-210ENST00000456853 ABCA10Q8WWZ4 1543 aa21.83■■□□□ 1.09
RBMS3-210ENST00000456853 AEBP2Q6ZN18 517 aaPredicted RBP21.76■■□□□ 1.07
RBMS3-210ENST00000456853 ERCC6L2Q5T890 1561 aa21.75■■□□□ 1.07
RBMS3-210ENST00000456853 WRNQ14191 1432 aaPredicted RBP eCLIP21.73■■□□□ 1.07
RBMS3-210ENST00000456853 GRIN2AQ12879 1464 aa21.71■■□□□ 1.07
RBMS3-210ENST00000456853 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
RBMS3-210ENST00000456853 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
RBMS3-210ENST00000456853 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
RBMS3-210ENST00000456853 CEP170Q5SW79 1584 aa21.69■■□□□ 1.06
RBMS3-210ENST00000456853 NUP160Q12769 1436 aa21.62■■□□□ 1.05
RBMS3-210ENST00000456853 FHAD1B1AJZ9 1412 aa21.6■■□□□ 1.05
RBMS3-210ENST00000456853 ERICH3Q5RHP9 1530 aa21.54■■□□□ 1.04
RBMS3-210ENST00000456853 SHROOM2Q13796 1616 aa21.54■■□□□ 1.04
RBMS3-210ENST00000456853 PRG4Q92954 1404 aaPredicted RBP21.48■■□□□ 1.03
RBMS3-210ENST00000456853 JPH4Q96JJ6 628 aa21.42■■□□□ 1.02
RBMS3-210ENST00000456853 RUSC2Q8N2Y8 1516 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms