RNA–Protein interactions for RNA: ENST00000456676.6

MLH1-213, Transcript of mutL homolog 1, humanhuman

TSL 1 (best)

Gene MLH1, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH1-213ENST00000456676 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
MLH1-213ENST00000456676 ABCC9O60706 1549 aa18.66■□□□□ 0.58
MLH1-213ENST00000456676 CCDC180Q9P1Z9 1646 aa18.43■□□□□ 0.54
MLH1-213ENST00000456676 DNAJC5BQ9UF47 199 aa17.79■□□□□ 0.44
MLH1-213ENST00000456676 RB1CC1Q8TDY2 1594 aa17.68■□□□□ 0.42
MLH1-213ENST00000456676 NACADO15069 1562 aa17.5■□□□□ 0.39
MLH1-213ENST00000456676 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
MLH1-213ENST00000456676 UNC13AQ9UPW8 1703 aa17.23■□□□□ 0.35
MLH1-213ENST00000456676 MYO15BQ96JP2 1530 aa17.19■□□□□ 0.34
MLH1-213ENST00000456676 DCAF8L2P0C7V8 631 aa17.18■□□□□ 0.34
MLH1-213ENST00000456676 BICRAQ9NZM4 1560 aa17.16■□□□□ 0.34
MLH1-213ENST00000456676 SHROOM4Q9ULL8 1493 aa16.99■□□□□ 0.31
MLH1-213ENST00000456676 CECR2Q9BXF3 1484 aa16.87■□□□□ 0.29
MLH1-213ENST00000456676 CC2D2AQ9P2K1 1620 aa16.86■□□□□ 0.29
MLH1-213ENST00000456676 DCAF1Q9Y4B6 1507 aa16.84■□□□□ 0.29
MLH1-213ENST00000456676 ZCCHC6Q5VYS8 1495 aaKnown RBP16.79■□□□□ 0.28
MLH1-213ENST00000456676 EIF4G1Q04637 1599 aaKnown RBP16.76■□□□□ 0.27
MLH1-213ENST00000456676 SCRIBQ14160 1630 aa16.69■□□□□ 0.26
MLH1-213ENST00000456676 DNAJC5Q9H3Z4 198 aa16.62■□□□□ 0.25
MLH1-213ENST00000456676 CUX2O14529 1486 aa16.3■□□□□ 0.2
MLH1-213ENST00000456676 NCAPD3P42695 1498 aa16.15■□□□□ 0.18
MLH1-213ENST00000456676 ERCC6Q03468 1493 aa16.14■□□□□ 0.17
MLH1-213ENST00000456676 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
MLH1-213ENST00000456676 HMGXB3Q12766 1538 aa16.01■□□□□ 0.15
MLH1-213ENST00000456676 SMARCA2P51531 1590 aa15.99■□□□□ 0.15
MLH1-213ENST00000456676 NESP48681 1621 aa15.93■□□□□ 0.14
MLH1-213ENST00000456676 SMARCA4P51532 1647 aa15.93■□□□□ 0.14
MLH1-213ENST00000456676 THOC2Q8NI27 1593 aaKnown RBP15.88■□□□□ 0.13
MLH1-213ENST00000456676 BAZ1BQ9UIG0 1483 aaKnown RBP15.85■□□□□ 0.13
MLH1-213ENST00000456676 LAMC3Q9Y6N6 1575 aa15.84■□□□□ 0.13
MLH1-213ENST00000456676 PEG3Q9GZU2 1588 aa15.82■□□□□ 0.12
MLH1-213ENST00000456676 BAZ1AQ9NRL2 1556 aaPredicted RBP15.81■□□□□ 0.12
MLH1-213ENST00000456676 PDS5BQ9NTI5 1447 aa15.75■□□□□ 0.11
MLH1-213ENST00000456676 KIF21AQ7Z4S6 1674 aa15.72■□□□□ 0.11
MLH1-213ENST00000456676 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
MLH1-213ENST00000456676 MROH2BQ7Z745 1585 aa15.64■□□□□ 0.09
MLH1-213ENST00000456676 MRC2Q9UBG0 1479 aa15.63■□□□□ 0.09
MLH1-213ENST00000456676 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
MLH1-213ENST00000456676 WDR62O43379 1518 aa15.6■□□□□ 0.09
MLH1-213ENST00000456676 CEP164Q9UPV0 1460 aa15.49■□□□□ 0.07
MLH1-213ENST00000456676 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
MLH1-213ENST00000456676 FANCD2Q9BXW9 1451 aa15.43■□□□□ 0.06
MLH1-213ENST00000456676 WIZO95785 1651 aa15.41■□□□□ 0.06
MLH1-213ENST00000456676 CFTRP13569 1480 aa15.39■□□□□ 0.05
MLH1-213ENST00000456676 URB2Q14146 1524 aaKnown RBP15.33■□□□□ 0.04
MLH1-213ENST00000456676 RIMBP3CA6NJZ7 1639 aa15.28■□□□□ 0.04
MLH1-213ENST00000456676 RIMBP3BA6NNM3 1639 aa15.28■□□□□ 0.04
MLH1-213ENST00000456676 RIMBP3Q9UFD9 1639 aa15.28■□□□□ 0.04
MLH1-213ENST00000456676 TOP2AP11388 1531 aaKnown RBP15.25■□□□□ 0.03
MLH1-213ENST00000456676 IFT140Q96RY7 1462 aa15.21■□□□□ 0.03
MLH1-213ENST00000456676 RSF1Q96T23 1441 aaPredicted RBP15.21■□□□□ 0.02
MLH1-213ENST00000456676 ARHGEF11O15085 1522 aa15.2■□□□□ 0.02
MLH1-213ENST00000456676 PRDM2Q13029 1718 aa15.2■□□□□ 0.02
MLH1-213ENST00000456676 ZNF608Q9ULD9 1512 aaPredicted RBP15.17■□□□□ 0.02
MLH1-213ENST00000456676 TOPBP1Q92547 1522 aa15.11■□□□□ 0.01
MLH1-213ENST00000456676 ABCC8Q09428 1581 aa15.1■□□□□ 0.01
MLH1-213ENST00000456676 EIF4G3O43432 1585 aaKnown RBP15.09■□□□□ 0.01
MLH1-213ENST00000456676 CCDC88BA6NC98 1476 aa15.06■□□□□ 0
MLH1-213ENST00000456676 CYB5RLQ6IPT4 315 aa15.05■□□□□ 0
MLH1-213ENST00000456676 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
MLH1-213ENST00000456676 ARAP1Q96P48 1450 aa15.03■□□□□ -0
MLH1-213ENST00000456676 CHD1O14646 1710 aa15.02□□□□□ -0.01
MLH1-213ENST00000456676 TARBP1Q13395 1621 aaKnown RBP15.01□□□□□ -0.01
MLH1-213ENST00000456676 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
MLH1-213ENST00000456676 AQRO60306 1485 aaKnown RBP eCLIP14.98□□□□□ -0.011e-6■■■■■ 28.4
MLH1-213ENST00000456676 POLA1P09884 1462 aaPredicted RBP14.92□□□□□ -0.02
MLH1-213ENST00000456676 FBLN2P98095 1184 aa14.9□□□□□ -0.02
MLH1-213ENST00000456676 WDR97A6NE52 1622 aa14.9□□□□□ -0.02
MLH1-213ENST00000456676 CLASP1Q7Z460 1538 aa14.89□□□□□ -0.03
MLH1-213ENST00000456676 SOGA1O94964 1423 aa14.85□□□□□ -0.03
MLH1-213ENST00000456676 RAD54L2Q9Y4B4 1467 aa14.85□□□□□ -0.03
MLH1-213ENST00000456676 SNAPC4Q5SXM2 1469 aa14.85□□□□□ -0.03
MLH1-213ENST00000456676 SYNJ1O43426 1573 aa14.84□□□□□ -0.03
MLH1-213ENST00000456676 TDRD9Q8NDG6 1382 aaKnown RBP14.84□□□□□ -0.03
MLH1-213ENST00000456676 MAGI1Q96QZ7 1491 aaPredicted RBP14.83□□□□□ -0.04
MLH1-213ENST00000456676 AEBP2Q6ZN18 517 aaPredicted RBP14.81□□□□□ -0.04
MLH1-213ENST00000456676 CHMP7Q8WUX9 453 aaPredicted RBP14.78□□□□□ -0.04
MLH1-213ENST00000456676 GRIN2BQ13224 1484 aa14.78□□□□□ -0.04
MLH1-213ENST00000456676 FGD5Q6ZNL6 1462 aa14.78□□□□□ -0.04
MLH1-213ENST00000456676 SYNJ2O15056 1496 aa14.77□□□□□ -0.04
MLH1-213ENST00000456676 GAPVD1Q14C86 1478 aa14.73□□□□□ -0.05
MLH1-213ENST00000456676 CUX1P39880 1505 aa14.72□□□□□ -0.05
MLH1-213ENST00000456676 PBRM1Q86U86 1689 aa14.67□□□□□ -0.06
MLH1-213ENST00000456676 ABCA10Q8WWZ4 1543 aa14.63□□□□□ -0.07
MLH1-213ENST00000456676 ABCA5Q8WWZ7 1642 aa14.63□□□□□ -0.07
MLH1-213ENST00000456676 GRIN2AQ12879 1464 aa14.58□□□□□ -0.08
MLH1-213ENST00000456676 ERCC6L2Q5T890 1561 aa14.58□□□□□ -0.08
MLH1-213ENST00000456676 NUP160Q12769 1436 aa14.57□□□□□ -0.08
MLH1-213ENST00000456676 CEP170Q5SW79 1584 aa14.56□□□□□ -0.08
MLH1-213ENST00000456676 SHROOM2Q13796 1616 aa14.54□□□□□ -0.08
MLH1-213ENST00000456676 ADAMTS12P58397 1594 aa14.54□□□□□ -0.08
MLH1-213ENST00000456676 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
MLH1-213ENST00000456676 WRNQ14191 1432 aaPredicted RBP eCLIP14.48□□□□□ -0.09
MLH1-213ENST00000456676 KIF13AQ9H1H9 1805 aa14.48□□□□□ -0.09
MLH1-213ENST00000456676 ERICH3Q5RHP9 1530 aa14.44□□□□□ -0.1
MLH1-213ENST00000456676 BIVM-ERCC5R4GMW8 1640 aa14.42□□□□□ -0.1
MLH1-213ENST00000456676 PRG4Q92954 1404 aaPredicted RBP14.41□□□□□ -0.1
MLH1-213ENST00000456676 TOP2BQ02880 1626 aa14.41□□□□□ -0.1
MLH1-213ENST00000456676 ABCC10Q5T3U5 1492 aa14.4□□□□□ -0.1
MLH1-213ENST00000456676 MAPKBP1O60336 1514 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms