RNA–Protein interactions for RNA: ENST00000456634.1

LINC00029-203, long intergenic non-protein coding RNA 29, humanhuman

TSL 1 (best)

Gene LINC00029, Length 633 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00029-203ENST00000456634 NISCHQ9Y2I1 1504 aa39.2■■■■□ 3.87
LINC00029-203ENST00000456634 CCDC180Q9P1Z9 1646 aa35.03■■■■□ 3.2
LINC00029-203ENST00000456634 ABCC9O60706 1549 aa34.41■■■■□ 3.1
LINC00029-203ENST00000456634 RB1CC1Q8TDY2 1594 aa33.09■■■□□ 2.89
LINC00029-203ENST00000456634 NACADO15069 1562 aa32.99■■■□□ 2.87
LINC00029-203ENST00000456634 DCAF8L2P0C7V8 631 aa32.93■■■□□ 2.86
LINC00029-203ENST00000456634 MYO15BQ96JP2 1530 aa32.71■■■□□ 2.83
LINC00029-203ENST00000456634 ZCCHC6Q5VYS8 1495 aaKnown RBP32.59■■■□□ 2.81
LINC00029-203ENST00000456634 DCAF1Q9Y4B6 1507 aa32.46■■■□□ 2.79
LINC00029-203ENST00000456634 UNC13AQ9UPW8 1703 aa32.26■■■□□ 2.76
LINC00029-203ENST00000456634 PABPN1Q86U42 306 aaKnown RBP eCLIP32.11■■■□□ 2.73
LINC00029-203ENST00000456634 BICRAQ9NZM4 1560 aa31.97■■■□□ 2.71
LINC00029-203ENST00000456634 SCRIBQ14160 1630 aa31.88■■■□□ 2.69
LINC00029-203ENST00000456634 SHROOM4Q9ULL8 1493 aa31.77■■■□□ 2.68
LINC00029-203ENST00000456634 DNAJC5BQ9UF47 199 aa31.69■■■□□ 2.66
LINC00029-203ENST00000456634 EIF4G1Q04637 1599 aaKnown RBP31.21■■■□□ 2.59
LINC00029-203ENST00000456634 CC2D2AQ9P2K1 1620 aa31.13■■■□□ 2.57
LINC00029-203ENST00000456634 CECR2Q9BXF3 1484 aa30.98■■■□□ 2.55
LINC00029-203ENST00000456634 SMARCA4P51532 1647 aa30.48■■■□□ 2.47
LINC00029-203ENST00000456634 BAZ1AQ9NRL2 1556 aaPredicted RBP30.45■■■□□ 2.47
LINC00029-203ENST00000456634 NCAPD3P42695 1498 aa30.39■■■□□ 2.46
LINC00029-203ENST00000456634 SMARCA2P51531 1590 aa30.39■■■□□ 2.46
LINC00029-203ENST00000456634 ATAD2BQ9ULI0 1458 aa30.35■■■□□ 2.45
LINC00029-203ENST00000456634 HMGXB3Q12766 1538 aa30.25■■■□□ 2.43
LINC00029-203ENST00000456634 PEG3Q9GZU2 1588 aa30.18■■■□□ 2.42
LINC00029-203ENST00000456634 MROH2BQ7Z745 1585 aa30.16■■■□□ 2.42
LINC00029-203ENST00000456634 BAZ1BQ9UIG0 1483 aaKnown RBP30.15■■■□□ 2.42
LINC00029-203ENST00000456634 WIZO95785 1651 aa29.85■■■□□ 2.37
LINC00029-203ENST00000456634 ERCC6Q03468 1493 aa29.78■■■□□ 2.36
LINC00029-203ENST00000456634 RSF1Q96T23 1441 aaPredicted RBP29.76■■■□□ 2.35
LINC00029-203ENST00000456634 LAMC3Q9Y6N6 1575 aa29.68■■■□□ 2.34
LINC00029-203ENST00000456634 NESP48681 1621 aa29.67■■■□□ 2.34
LINC00029-203ENST00000456634 TOP2AP11388 1531 aaKnown RBP29.55■■■□□ 2.32
LINC00029-203ENST00000456634 CUX2O14529 1486 aa29.53■■■□□ 2.32
LINC00029-203ENST00000456634 PDS5BQ9NTI5 1447 aa29.52■■■□□ 2.32
LINC00029-203ENST00000456634 CADPSQ9ULU8 1353 aa29.52■■■□□ 2.32
LINC00029-203ENST00000456634 KIF21AQ7Z4S6 1674 aa29.37■■■□□ 2.29
LINC00029-203ENST00000456634 THOC2Q8NI27 1593 aaKnown RBP29.3■■■□□ 2.28
LINC00029-203ENST00000456634 CFTRP13569 1480 aa29.27■■■□□ 2.28
LINC00029-203ENST00000456634 CEP164Q9UPV0 1460 aa29.19■■■□□ 2.26
LINC00029-203ENST00000456634 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
LINC00029-203ENST00000456634 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
LINC00029-203ENST00000456634 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
LINC00029-203ENST00000456634 PRDM2Q13029 1718 aa29.1■■■□□ 2.25
LINC00029-203ENST00000456634 WDR62O43379 1518 aa29.05■■■□□ 2.24
LINC00029-203ENST00000456634 SUPT5HO00267 1087 aaKnown RBP28.88■■■□□ 2.21
LINC00029-203ENST00000456634 DNAJC5Q9H3Z4 198 aa28.86■■■□□ 2.21
LINC00029-203ENST00000456634 URB2Q14146 1524 aaKnown RBP28.84■■■□□ 2.21
LINC00029-203ENST00000456634 ABCC8Q09428 1581 aa28.76■■■□□ 2.19
LINC00029-203ENST00000456634 TOPBP1Q92547 1522 aa28.66■■■□□ 2.18
LINC00029-203ENST00000456634 DNMBPQ6XZF7 1577 aa28.64■■■□□ 2.18
LINC00029-203ENST00000456634 IFT140Q96RY7 1462 aa28.59■■■□□ 2.17
LINC00029-203ENST00000456634 POLA1P09884 1462 aaPredicted RBP28.4■■■□□ 2.14
LINC00029-203ENST00000456634 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
LINC00029-203ENST00000456634 TARBP1Q13395 1621 aaKnown RBP28.35■■■□□ 2.13
LINC00029-203ENST00000456634 CUX1P39880 1505 aa28.33■■■□□ 2.13
LINC00029-203ENST00000456634 SOGA1O94964 1423 aa28.32■■■□□ 2.12
LINC00029-203ENST00000456634 EIF4G3O43432 1585 aaKnown RBP28.31■■■□□ 2.12
LINC00029-203ENST00000456634 FGD5Q6ZNL6 1462 aa28.3■■■□□ 2.12
LINC00029-203ENST00000456634 OSCARQ8IYS5 282 aa28.29■■■□□ 2.12
LINC00029-203ENST00000456634 RAD54L2Q9Y4B4 1467 aa28.24■■■□□ 2.11
LINC00029-203ENST00000456634 WDR97A6NE52 1622 aa28.22■■■□□ 2.11
LINC00029-203ENST00000456634 AQRO60306 1485 aaKnown RBP eCLIP28.21■■■□□ 2.11
LINC00029-203ENST00000456634 TDRD9Q8NDG6 1382 aaKnown RBP28.14■■■□□ 2.1
LINC00029-203ENST00000456634 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.09
LINC00029-203ENST00000456634 TOP2BQ02880 1626 aa28.07■■■□□ 2.08
LINC00029-203ENST00000456634 BIVM-ERCC5R4GMW8 1640 aa28.07■■■□□ 2.08
LINC00029-203ENST00000456634 GRIN2BQ13224 1484 aa28.03■■■□□ 2.08
LINC00029-203ENST00000456634 ABCA10Q8WWZ4 1543 aa28.02■■■□□ 2.08
LINC00029-203ENST00000456634 CHD1O14646 1710 aa28.02■■■□□ 2.08
LINC00029-203ENST00000456634 FBLN2P98095 1184 aa28.02■■■□□ 2.08
LINC00029-203ENST00000456634 SYNJ1O43426 1573 aa28■■■□□ 2.07
LINC00029-203ENST00000456634 GAPVD1Q14C86 1478 aa27.99■■■□□ 2.07
LINC00029-203ENST00000456634 MAGI1Q96QZ7 1491 aaPredicted RBP27.99■■■□□ 2.07
LINC00029-203ENST00000456634 SNAPC4Q5SXM2 1469 aa27.98■■■□□ 2.07
LINC00029-203ENST00000456634 PBRM1Q86U86 1689 aa27.94■■■□□ 2.06
LINC00029-203ENST00000456634 CHMP7Q8WUX9 453 aaPredicted RBP27.93■■■□□ 2.06
LINC00029-203ENST00000456634 ABCA5Q8WWZ7 1642 aa27.92■■■□□ 2.06
LINC00029-203ENST00000456634 SYNJ2O15056 1496 aa27.86■■■□□ 2.05
LINC00029-203ENST00000456634 TRIM41Q8WV44 630 aa27.83■■■□□ 2.05
LINC00029-203ENST00000456634 RIMBP3CA6NJZ7 1639 aa27.78■■■□□ 2.04
LINC00029-203ENST00000456634 RIMBP3BA6NNM3 1639 aa27.78■■■□□ 2.04
LINC00029-203ENST00000456634 RIMBP3Q9UFD9 1639 aa27.78■■■□□ 2.04
LINC00029-203ENST00000456634 ARHGEF11O15085 1522 aa27.76■■■□□ 2.03
LINC00029-203ENST00000456634 ERICH3Q5RHP9 1530 aa27.72■■■□□ 2.03
LINC00029-203ENST00000456634 ADAMTS12P58397 1594 aa27.68■■■□□ 2.02
LINC00029-203ENST00000456634 CLASP1Q7Z460 1538 aa27.67■■■□□ 2.02
LINC00029-203ENST00000456634 FHAD1B1AJZ9 1412 aa27.67■■■□□ 2.02
LINC00029-203ENST00000456634 GRIN2AQ12879 1464 aa27.64■■■□□ 2.01
LINC00029-203ENST00000456634 KIF27Q86VH2 1401 aa27.59■■■□□ 2.01
LINC00029-203ENST00000456634 CYB5RLQ6IPT4 315 aa27.55■■■□□ 2
LINC00029-203ENST00000456634 NUP160Q12769 1436 aa27.5■■□□□ 1.99
LINC00029-203ENST00000456634 ARAP1Q96P48 1450 aa27.49■■□□□ 1.99
LINC00029-203ENST00000456634 CEP170Q5SW79 1584 aa27.47■■□□□ 1.99
LINC00029-203ENST00000456634 CUL7Q14999 1698 aa27.46■■□□□ 1.99
LINC00029-203ENST00000456634 IGF1RP08069 1367 aa27.43■■□□□ 1.98
LINC00029-203ENST00000456634 SHROOM2Q13796 1616 aa27.32■■□□□ 1.96
LINC00029-203ENST00000456634 CARMIL1Q5VZK9 1371 aa27.31■■□□□ 1.96
LINC00029-203ENST00000456634 JPH4Q96JJ6 628 aa27.27■■□□□ 1.96
LINC00029-203ENST00000456634 RUSC2Q8N2Y8 1516 aa27.26■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms