RNA–Protein interactions for RNA: ENST00000456554.2

SNX18P4-201, Transcript of sorting nexin 18 pseudogene 4, humanhuman

BASIC

Gene SNX18P4, Length 838 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18P4-201ENST00000456554 NISCHQ9Y2I1 1504 aa20.78■□□□□ 0.92
SNX18P4-201ENST00000456554 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
SNX18P4-201ENST00000456554 CCDC180Q9P1Z9 1646 aa18.39■□□□□ 0.53
SNX18P4-201ENST00000456554 CHIC1Q5VXU3 224 aa17.97■□□□□ 0.47
SNX18P4-201ENST00000456554 ZCCHC6Q5VYS8 1495 aaKnown RBP17.39■□□□□ 0.37
SNX18P4-201ENST00000456554 ABCC9O60706 1549 aa17.39■□□□□ 0.37
SNX18P4-201ENST00000456554 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
SNX18P4-201ENST00000456554 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
SNX18P4-201ENST00000456554 NACADO15069 1562 aa17.2■□□□□ 0.34
SNX18P4-201ENST00000456554 RB1CC1Q8TDY2 1594 aa17.06■□□□□ 0.32
SNX18P4-201ENST00000456554 DCAF8L2P0C7V8 631 aa16.87■□□□□ 0.29
SNX18P4-201ENST00000456554 UNC13AQ9UPW8 1703 aa16.65■□□□□ 0.26
SNX18P4-201ENST00000456554 SHROOM4Q9ULL8 1493 aa16.59■□□□□ 0.25
SNX18P4-201ENST00000456554 BICRAQ9NZM4 1560 aa16.55■□□□□ 0.24
SNX18P4-201ENST00000456554 SCRIBQ14160 1630 aa16.55■□□□□ 0.24
SNX18P4-201ENST00000456554 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
SNX18P4-201ENST00000456554 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
SNX18P4-201ENST00000456554 PHF23Q9BUL5 403 aaPredicted RBP16.13■□□□□ 0.17
SNX18P4-201ENST00000456554 BAZ1AQ9NRL2 1556 aaPredicted RBP16.08■□□□□ 0.16
SNX18P4-201ENST00000456554 CECR2Q9BXF3 1484 aa16.05■□□□□ 0.16
SNX18P4-201ENST00000456554 EIF4G1Q04637 1599 aaKnown RBP16.04■□□□□ 0.16
SNX18P4-201ENST00000456554 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
SNX18P4-201ENST00000456554 PEG3Q9GZU2 1588 aa16■□□□□ 0.15
SNX18P4-201ENST00000456554 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
SNX18P4-201ENST00000456554 RSF1Q96T23 1441 aaPredicted RBP15.93■□□□□ 0.14
SNX18P4-201ENST00000456554 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
SNX18P4-201ENST00000456554 SMARCA2P51531 1590 aa15.88■□□□□ 0.13
SNX18P4-201ENST00000456554 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
SNX18P4-201ENST00000456554 ATAD2BQ9ULI0 1458 aa15.85■□□□□ 0.13
SNX18P4-201ENST00000456554 HMGXB3Q12766 1538 aa15.82■□□□□ 0.12
SNX18P4-201ENST00000456554 WIZO95785 1651 aa15.75■□□□□ 0.11
SNX18P4-201ENST00000456554 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
SNX18P4-201ENST00000456554 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
SNX18P4-201ENST00000456554 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
SNX18P4-201ENST00000456554 SUPT5HO00267 1087 aaKnown RBP15.51■□□□□ 0.07
SNX18P4-201ENST00000456554 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
SNX18P4-201ENST00000456554 CFTRP13569 1480 aa15.39■□□□□ 0.05
SNX18P4-201ENST00000456554 CADPSQ9ULU8 1353 aa15.36■□□□□ 0.05
SNX18P4-201ENST00000456554 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
SNX18P4-201ENST00000456554 FOXD1Q16676 465 aa15.32■□□□□ 0.04
SNX18P4-201ENST00000456554 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
SNX18P4-201ENST00000456554 PDS5BQ9NTI5 1447 aa15.21■□□□□ 0.03
SNX18P4-201ENST00000456554 NESP48681 1621 aa15.17■□□□□ 0.02
SNX18P4-201ENST00000456554 FANCD2Q9BXW9 1451 aa15.12■□□□□ 0.01
SNX18P4-201ENST00000456554 ABCC8Q09428 1581 aa15.07■□□□□ 0
SNX18P4-201ENST00000456554 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
SNX18P4-201ENST00000456554 POTEDQ86YR6 584 aa15.05■□□□□ -0
SNX18P4-201ENST00000456554 KIF21AQ7Z4S6 1674 aa15.05■□□□□ -0
SNX18P4-201ENST00000456554 MRC2Q9UBG0 1479 aa15□□□□□ -0.01
SNX18P4-201ENST00000456554 WDR62O43379 1518 aa14.99□□□□□ -0.01
SNX18P4-201ENST00000456554 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
SNX18P4-201ENST00000456554 DNMBPQ6XZF7 1577 aa14.98□□□□□ -0.01
SNX18P4-201ENST00000456554 WRNQ14191 1432 aaPredicted RBP eCLIP14.97□□□□□ -0.01
SNX18P4-201ENST00000456554 ERCC6Q03468 1493 aa14.96□□□□□ -0.01
SNX18P4-201ENST00000456554 BIVM-ERCC5R4GMW8 1640 aa14.96□□□□□ -0.01
SNX18P4-201ENST00000456554 TOP2BQ02880 1626 aa14.95□□□□□ -0.02
SNX18P4-201ENST00000456554 URB2Q14146 1524 aaKnown RBP14.95□□□□□ -0.02
SNX18P4-201ENST00000456554 TOPBP1Q92547 1522 aa14.94□□□□□ -0.02
SNX18P4-201ENST00000456554 CUX1P39880 1505 aa14.93□□□□□ -0.02
SNX18P4-201ENST00000456554 CUX2O14529 1486 aa14.89□□□□□ -0.03
SNX18P4-201ENST00000456554 SYNJ1O43426 1573 aa14.88□□□□□ -0.03
SNX18P4-201ENST00000456554 POLA1P09884 1462 aaPredicted RBP14.83□□□□□ -0.03
SNX18P4-201ENST00000456554 WDR97A6NE52 1622 aa14.82□□□□□ -0.04
SNX18P4-201ENST00000456554 FGD5Q6ZNL6 1462 aa14.81□□□□□ -0.04
SNX18P4-201ENST00000456554 TARBP1Q13395 1621 aaKnown RBP14.79□□□□□ -0.04
SNX18P4-201ENST00000456554 ABCA10Q8WWZ4 1543 aa14.79□□□□□ -0.04
SNX18P4-201ENST00000456554 IFT140Q96RY7 1462 aa14.79□□□□□ -0.04
SNX18P4-201ENST00000456554 SOGA1O94964 1423 aa14.76□□□□□ -0.05
SNX18P4-201ENST00000456554 TRIM41Q8WV44 630 aa14.75□□□□□ -0.05
SNX18P4-201ENST00000456554 EEA1Q15075 1411 aa14.69□□□□□ -0.06
SNX18P4-201ENST00000456554 RAD54L2Q9Y4B4 1467 aa14.68□□□□□ -0.06
SNX18P4-201ENST00000456554 ABCA5Q8WWZ7 1642 aa14.66□□□□□ -0.06
SNX18P4-201ENST00000456554 MSH5O43196 834 aa14.65□□□□□ -0.06
SNX18P4-201ENST00000456554 KIF27Q86VH2 1401 aa14.65□□□□□ -0.06
SNX18P4-201ENST00000456554 ERICH3Q5RHP9 1530 aa14.62□□□□□ -0.07
SNX18P4-201ENST00000456554 GAPVD1Q14C86 1478 aa14.6□□□□□ -0.07
SNX18P4-201ENST00000456554 ZNF608Q9ULD9 1512 aaPredicted RBP14.6□□□□□ -0.07
SNX18P4-201ENST00000456554 GRIN2BQ13224 1484 aa14.58□□□□□ -0.08
SNX18P4-201ENST00000456554 EIF4G3O43432 1585 aaKnown RBP14.58□□□□□ -0.08
SNX18P4-201ENST00000456554 IGF1RP08069 1367 aa14.58□□□□□ -0.08
SNX18P4-201ENST00000456554 TDRD9Q8NDG6 1382 aaKnown RBP14.57□□□□□ -0.08
SNX18P4-201ENST00000456554 AQRO60306 1485 aaKnown RBP eCLIP14.55□□□□□ -0.08
SNX18P4-201ENST00000456554 MAGI1Q96QZ7 1491 aaPredicted RBP14.55□□□□□ -0.08
SNX18P4-201ENST00000456554 CUL7Q14999 1698 aa14.52□□□□□ -0.08
SNX18P4-201ENST00000456554 PBRM1Q86U86 1689 aa14.52□□□□□ -0.08
SNX18P4-201ENST00000456554 RUSC2Q8N2Y8 1516 aa14.52□□□□□ -0.08
SNX18P4-201ENST00000456554 PRXQ9BXM0 1461 aa14.52□□□□□ -0.08
SNX18P4-201ENST00000456554 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
SNX18P4-201ENST00000456554 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
SNX18P4-201ENST00000456554 SYNJ2O15056 1496 aa14.46□□□□□ -0.09
SNX18P4-201ENST00000456554 ADAMTS12P58397 1594 aa14.46□□□□□ -0.09
SNX18P4-201ENST00000456554 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.1
SNX18P4-201ENST00000456554 KIF21BO75037 1637 aa14.45□□□□□ -0.1
SNX18P4-201ENST00000456554 SNAPC4Q5SXM2 1469 aa14.43□□□□□ -0.1
SNX18P4-201ENST00000456554 RAPGEF2Q9Y4G8 1499 aa14.42□□□□□ -0.1
SNX18P4-201ENST00000456554 GRIN2AQ12879 1464 aa14.38□□□□□ -0.11
SNX18P4-201ENST00000456554 NUP160Q12769 1436 aa14.37□□□□□ -0.11
SNX18P4-201ENST00000456554 GOLGA3Q08378 1498 aa14.32□□□□□ -0.12
SNX18P4-201ENST00000456554 CHMP7Q8WUX9 453 aaPredicted RBP14.31□□□□□ -0.12
SNX18P4-201ENST00000456554 CHD1O14646 1710 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms