RNA–Protein interactions for RNA: ENST00000456423.1

CLDN16-202, Transcript of claudin 16, humanhuman

TSL 1 (best) BASIC

Gene CLDN16, Length 430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16-202ENST00000456423 NISCHQ9Y2I1 1504 aa29.33■■■□□ 2.29
CLDN16-202ENST00000456423 ABCC9O60706 1549 aa26.33■■□□□ 1.81
CLDN16-202ENST00000456423 CCDC180Q9P1Z9 1646 aa26.25■■□□□ 1.79
CLDN16-202ENST00000456423 RB1CC1Q8TDY2 1594 aa24.98■■□□□ 1.59
CLDN16-202ENST00000456423 NACADO15069 1562 aa24.8■■□□□ 1.56
CLDN16-202ENST00000456423 DCAF8L2P0C7V8 631 aa24.8■■□□□ 1.56
CLDN16-202ENST00000456423 DNAJC5BQ9UF47 199 aa24.7■■□□□ 1.54
CLDN16-202ENST00000456423 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
CLDN16-202ENST00000456423 UNC13AQ9UPW8 1703 aa24.5■■□□□ 1.51
CLDN16-202ENST00000456423 MYO15BQ96JP2 1530 aa24.42■■□□□ 1.5
CLDN16-202ENST00000456423 BICRAQ9NZM4 1560 aa24.33■■□□□ 1.48
CLDN16-202ENST00000456423 ZCCHC6Q5VYS8 1495 aaKnown RBP24.32■■□□□ 1.48
CLDN16-202ENST00000456423 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
CLDN16-202ENST00000456423 SCRIBQ14160 1630 aa24.03■■□□□ 1.44
CLDN16-202ENST00000456423 SHROOM4Q9ULL8 1493 aa23.85■■□□□ 1.41
CLDN16-202ENST00000456423 CC2D2AQ9P2K1 1620 aa23.76■■□□□ 1.39
CLDN16-202ENST00000456423 EIF4G1Q04637 1599 aaKnown RBP23.7■■□□□ 1.38
CLDN16-202ENST00000456423 CECR2Q9BXF3 1484 aa23.67■■□□□ 1.38
CLDN16-202ENST00000456423 NCAPD3P42695 1498 aa22.91■■□□□ 1.26
CLDN16-202ENST00000456423 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
CLDN16-202ENST00000456423 SMARCA4P51532 1647 aa22.89■■□□□ 1.25
CLDN16-202ENST00000456423 SMARCA2P51531 1590 aa22.78■■□□□ 1.24
CLDN16-202ENST00000456423 HMGXB3Q12766 1538 aa22.75■■□□□ 1.23
CLDN16-202ENST00000456423 BAZ1AQ9NRL2 1556 aaPredicted RBP22.73■■□□□ 1.23
CLDN16-202ENST00000456423 ERCC6Q03468 1493 aa22.68■■□□□ 1.22
CLDN16-202ENST00000456423 BAZ1BQ9UIG0 1483 aaKnown RBP22.66■■□□□ 1.22
CLDN16-202ENST00000456423 NESP48681 1621 aa22.65■■□□□ 1.22
CLDN16-202ENST00000456423 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
CLDN16-202ENST00000456423 PEG3Q9GZU2 1588 aa22.61■■□□□ 1.21
CLDN16-202ENST00000456423 CUX2O14529 1486 aa22.58■■□□□ 1.2
CLDN16-202ENST00000456423 DNAJC5Q9H3Z4 198 aa22.55■■□□□ 1.2
CLDN16-202ENST00000456423 WIZO95785 1651 aa22.39■■□□□ 1.18
CLDN16-202ENST00000456423 LAMC3Q9Y6N6 1575 aa22.38■■□□□ 1.17
CLDN16-202ENST00000456423 THOC2Q8NI27 1593 aaKnown RBP22.37■■□□□ 1.17
CLDN16-202ENST00000456423 KIF21AQ7Z4S6 1674 aa22.34■■□□□ 1.17
CLDN16-202ENST00000456423 PDS5BQ9NTI5 1447 aa22.24■■□□□ 1.15
CLDN16-202ENST00000456423 CADPSQ9ULU8 1353 aa22.23■■□□□ 1.15
CLDN16-202ENST00000456423 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
CLDN16-202ENST00000456423 MRC2Q9UBG0 1479 aa22.09■■□□□ 1.13
CLDN16-202ENST00000456423 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
CLDN16-202ENST00000456423 WDR62O43379 1518 aa22.04■■□□□ 1.12
CLDN16-202ENST00000456423 FANCD2Q9BXW9 1451 aa22.01■■□□□ 1.11
CLDN16-202ENST00000456423 CEP164Q9UPV0 1460 aa22.01■■□□□ 1.11
CLDN16-202ENST00000456423 CFTRP13569 1480 aa21.99■■□□□ 1.11
CLDN16-202ENST00000456423 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
CLDN16-202ENST00000456423 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.09
CLDN16-202ENST00000456423 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
CLDN16-202ENST00000456423 TRIM41Q8WV44 630 aa21.66■■□□□ 1.06
CLDN16-202ENST00000456423 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
CLDN16-202ENST00000456423 ZNF608Q9ULD9 1512 aaPredicted RBP21.6■■□□□ 1.05
CLDN16-202ENST00000456423 OSCARQ8IYS5 282 aa21.56■■□□□ 1.04
CLDN16-202ENST00000456423 IFT140Q96RY7 1462 aa21.55■■□□□ 1.04
CLDN16-202ENST00000456423 DNMBPQ6XZF7 1577 aa21.51■■□□□ 1.03
CLDN16-202ENST00000456423 EIF4G3O43432 1585 aaKnown RBP21.45■■□□□ 1.02
CLDN16-202ENST00000456423 ABCC8Q09428 1581 aa21.45■■□□□ 1.02
CLDN16-202ENST00000456423 TARBP1Q13395 1621 aaKnown RBP21.41■■□□□ 1.02
CLDN16-202ENST00000456423 AQRO60306 1485 aaKnown RBP eCLIP21.39■■□□□ 1.02
CLDN16-202ENST00000456423 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.01
CLDN16-202ENST00000456423 RAD54L2Q9Y4B4 1467 aa21.35■■□□□ 1.01
CLDN16-202ENST00000456423 RIMBP3CA6NJZ7 1639 aa21.34■■□□□ 1.01
CLDN16-202ENST00000456423 RIMBP3BA6NNM3 1639 aa21.34■■□□□ 1.01
CLDN16-202ENST00000456423 RIMBP3Q9UFD9 1639 aa21.34■■□□□ 1.01
CLDN16-202ENST00000456423 CHD1O14646 1710 aa21.3■■□□□ 1
CLDN16-202ENST00000456423 SOGA1O94964 1423 aa21.28■■□□□ 1
CLDN16-202ENST00000456423 TDRD9Q8NDG6 1382 aaKnown RBP21.27■■□□□ 1
CLDN16-202ENST00000456423 SUPT5HO00267 1087 aaKnown RBP21.27■■□□□ 1
CLDN16-202ENST00000456423 ARHGEF11O15085 1522 aa21.27■■□□□ 1
CLDN16-202ENST00000456423 CUX1P39880 1505 aa21.27■■□□□ 1
CLDN16-202ENST00000456423 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
CLDN16-202ENST00000456423 FBLN2P98095 1184 aa21.24■□□□□ 0.99
CLDN16-202ENST00000456423 SNAPC4Q5SXM2 1469 aa21.16■□□□□ 0.98
CLDN16-202ENST00000456423 CYB5RLQ6IPT4 315 aa21.12■□□□□ 0.97
CLDN16-202ENST00000456423 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
CLDN16-202ENST00000456423 ARAP1Q96P48 1450 aa21.07■□□□□ 0.96
CLDN16-202ENST00000456423 GRIN2BQ13224 1484 aa21.07■□□□□ 0.96
CLDN16-202ENST00000456423 CHMP7Q8WUX9 453 aaPredicted RBP21.04■□□□□ 0.96
CLDN16-202ENST00000456423 MAGI1Q96QZ7 1491 aaPredicted RBP21.04■□□□□ 0.96
CLDN16-202ENST00000456423 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
CLDN16-202ENST00000456423 CLASP1Q7Z460 1538 aa21.03■□□□□ 0.96
CLDN16-202ENST00000456423 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
CLDN16-202ENST00000456423 SYNJ2O15056 1496 aa21■□□□□ 0.95
CLDN16-202ENST00000456423 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
CLDN16-202ENST00000456423 SYNJ1O43426 1573 aa20.98■□□□□ 0.95
CLDN16-202ENST00000456423 ABCA5Q8WWZ7 1642 aa20.98■□□□□ 0.95
CLDN16-202ENST00000456423 TOP2BQ02880 1626 aa20.9■□□□□ 0.94
CLDN16-202ENST00000456423 BIVM-ERCC5R4GMW8 1640 aa20.9■□□□□ 0.94
CLDN16-202ENST00000456423 WRNQ14191 1432 aaPredicted RBP eCLIP20.9■□□□□ 0.94
CLDN16-202ENST00000456423 TRHP20396 242 aaPredicted RBP20.87■□□□□ 0.93
CLDN16-202ENST00000456423 ADAMTS12P58397 1594 aa20.82■□□□□ 0.92
CLDN16-202ENST00000456423 GRIN2AQ12879 1464 aa20.81■□□□□ 0.92
CLDN16-202ENST00000456423 CEP170Q5SW79 1584 aa20.78■□□□□ 0.92
CLDN16-202ENST00000456423 ERCC6L2Q5T890 1561 aa20.78■□□□□ 0.92
CLDN16-202ENST00000456423 NUP160Q12769 1436 aa20.73■□□□□ 0.91
CLDN16-202ENST00000456423 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
CLDN16-202ENST00000456423 ERICH3Q5RHP9 1530 aa20.71■□□□□ 0.91
CLDN16-202ENST00000456423 SHROOM2Q13796 1616 aa20.64■□□□□ 0.9
CLDN16-202ENST00000456423 PRG4Q92954 1404 aaPredicted RBP20.55■□□□□ 0.88
CLDN16-202ENST00000456423 RUSC2Q8N2Y8 1516 aa20.53■□□□□ 0.88
CLDN16-202ENST00000456423 JPH4Q96JJ6 628 aa20.52■□□□□ 0.88
CLDN16-202ENST00000456423 IGF1RP08069 1367 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms