RNA–Protein interactions for RNA: ENST00000456374.2

STAG3L1-202, Transcript of stromal antigen 3-like 1 (pseudogene), humanhuman

BASIC

Gene STAG3L1, Length 894 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3L1-202ENST00000456374 NISCHQ9Y2I1 1504 aa27.02■■□□□ 1.92
STAG3L1-202ENST00000456374 CCDC180Q9P1Z9 1646 aa24.04■■□□□ 1.44
STAG3L1-202ENST00000456374 ABCC9O60706 1549 aa23.22■■□□□ 1.31
STAG3L1-202ENST00000456374 ZCCHC6Q5VYS8 1495 aaKnown RBP22.59■■□□□ 1.21
STAG3L1-202ENST00000456374 NACADO15069 1562 aa22.46■■□□□ 1.19
STAG3L1-202ENST00000456374 RB1CC1Q8TDY2 1594 aa22.45■■□□□ 1.18
STAG3L1-202ENST00000456374 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
STAG3L1-202ENST00000456374 DCAF1Q9Y4B6 1507 aa22.37■■□□□ 1.17
STAG3L1-202ENST00000456374 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
STAG3L1-202ENST00000456374 UNC13AQ9UPW8 1703 aa22.05■■□□□ 1.12
STAG3L1-202ENST00000456374 SCRIBQ14160 1630 aa21.93■■□□□ 1.1
STAG3L1-202ENST00000456374 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
STAG3L1-202ENST00000456374 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
STAG3L1-202ENST00000456374 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.05
STAG3L1-202ENST00000456374 SHROOM4Q9ULL8 1493 aa21.53■■□□□ 1.04
STAG3L1-202ENST00000456374 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.98
STAG3L1-202ENST00000456374 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
STAG3L1-202ENST00000456374 CECR2Q9BXF3 1484 aa20.99■□□□□ 0.95
STAG3L1-202ENST00000456374 SMARCA4P51532 1647 aa20.98■□□□□ 0.95
STAG3L1-202ENST00000456374 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
STAG3L1-202ENST00000456374 MROH2BQ7Z745 1585 aa20.82■□□□□ 0.92
STAG3L1-202ENST00000456374 SMARCA2P51531 1590 aa20.77■□□□□ 0.92
STAG3L1-202ENST00000456374 PEG3Q9GZU2 1588 aa20.73■□□□□ 0.91
STAG3L1-202ENST00000456374 ATAD2BQ9ULI0 1458 aa20.71■□□□□ 0.91
STAG3L1-202ENST00000456374 WIZO95785 1651 aa20.68■□□□□ 0.9
STAG3L1-202ENST00000456374 HMGXB3Q12766 1538 aa20.66■□□□□ 0.9
STAG3L1-202ENST00000456374 NCAPD3P42695 1498 aa20.64■□□□□ 0.89
STAG3L1-202ENST00000456374 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.89
STAG3L1-202ENST00000456374 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
STAG3L1-202ENST00000456374 TOP2AP11388 1531 aaKnown RBP20.47■□□□□ 0.87
STAG3L1-202ENST00000456374 SUPT5HO00267 1087 aaKnown RBP20.32■□□□□ 0.84
STAG3L1-202ENST00000456374 LAMC3Q9Y6N6 1575 aa20.16■□□□□ 0.82
STAG3L1-202ENST00000456374 CCDC88BA6NC98 1476 aa20.15■□□□□ 0.82
STAG3L1-202ENST00000456374 PRDM2Q13029 1718 aa20.12■□□□□ 0.81
STAG3L1-202ENST00000456374 NESP48681 1621 aa20.1■□□□□ 0.81
STAG3L1-202ENST00000456374 CADPSQ9ULU8 1353 aa20.05■□□□□ 0.8
STAG3L1-202ENST00000456374 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
STAG3L1-202ENST00000456374 CFTRP13569 1480 aa20■□□□□ 0.79
STAG3L1-202ENST00000456374 ERCC6Q03468 1493 aa19.99■□□□□ 0.79
STAG3L1-202ENST00000456374 PDS5BQ9NTI5 1447 aa19.94■□□□□ 0.78
STAG3L1-202ENST00000456374 CUX2O14529 1486 aa19.88■□□□□ 0.77
STAG3L1-202ENST00000456374 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
STAG3L1-202ENST00000456374 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
STAG3L1-202ENST00000456374 THOC2Q8NI27 1593 aaKnown RBP19.86■□□□□ 0.77
STAG3L1-202ENST00000456374 MRC2Q9UBG0 1479 aa19.76■□□□□ 0.75
STAG3L1-202ENST00000456374 WDR62O43379 1518 aa19.71■□□□□ 0.75
STAG3L1-202ENST00000456374 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
STAG3L1-202ENST00000456374 DNMBPQ6XZF7 1577 aa19.64■□□□□ 0.73
STAG3L1-202ENST00000456374 ABCC8Q09428 1581 aa19.61■□□□□ 0.73
STAG3L1-202ENST00000456374 TOPBP1Q92547 1522 aa19.6■□□□□ 0.73
STAG3L1-202ENST00000456374 DNAJC5Q9H3Z4 198 aa19.59■□□□□ 0.73
STAG3L1-202ENST00000456374 CUX1P39880 1505 aa19.54■□□□□ 0.72
STAG3L1-202ENST00000456374 BIVM-ERCC5R4GMW8 1640 aa19.51■□□□□ 0.71
STAG3L1-202ENST00000456374 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
STAG3L1-202ENST00000456374 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
STAG3L1-202ENST00000456374 TOP2BQ02880 1626 aa19.48■□□□□ 0.71
STAG3L1-202ENST00000456374 FGD5Q6ZNL6 1462 aa19.45■□□□□ 0.7
STAG3L1-202ENST00000456374 POLA1P09884 1462 aaPredicted RBP19.43■□□□□ 0.7
STAG3L1-202ENST00000456374 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
STAG3L1-202ENST00000456374 TARBP1Q13395 1621 aaKnown RBP19.38■□□□□ 0.69
STAG3L1-202ENST00000456374 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
STAG3L1-202ENST00000456374 RAD54L2Q9Y4B4 1467 aa19.33■□□□□ 0.68
STAG3L1-202ENST00000456374 SOGA1O94964 1423 aa19.33■□□□□ 0.68
STAG3L1-202ENST00000456374 EIF4G3O43432 1585 aaKnown RBP19.32■□□□□ 0.68
STAG3L1-202ENST00000456374 ZNF608Q9ULD9 1512 aaPredicted RBP19.26■□□□□ 0.67
STAG3L1-202ENST00000456374 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
STAG3L1-202ENST00000456374 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
STAG3L1-202ENST00000456374 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
STAG3L1-202ENST00000456374 TRIM41Q8WV44 630 aa19.19■□□□□ 0.66
STAG3L1-202ENST00000456374 AQRO60306 1485 aaKnown RBP eCLIP19.17■□□□□ 0.66
STAG3L1-202ENST00000456374 TDRD9Q8NDG6 1382 aaKnown RBP19.17■□□□□ 0.66
STAG3L1-202ENST00000456374 GAPVD1Q14C86 1478 aa19.14■□□□□ 0.65
STAG3L1-202ENST00000456374 GRIN2BQ13224 1484 aa19.1■□□□□ 0.65
STAG3L1-202ENST00000456374 KIF27Q86VH2 1401 aa19.08■□□□□ 0.65
STAG3L1-202ENST00000456374 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
STAG3L1-202ENST00000456374 CHD1O14646 1710 aa19.07■□□□□ 0.64
STAG3L1-202ENST00000456374 SNAPC4Q5SXM2 1469 aa19.07■□□□□ 0.64
STAG3L1-202ENST00000456374 ERICH3Q5RHP9 1530 aa19.05■□□□□ 0.64
STAG3L1-202ENST00000456374 MAGI1Q96QZ7 1491 aaPredicted RBP19.05■□□□□ 0.64
STAG3L1-202ENST00000456374 ADAMTS12P58397 1594 aa19.02■□□□□ 0.64
STAG3L1-202ENST00000456374 CUL7Q14999 1698 aa19.01■□□□□ 0.63
STAG3L1-202ENST00000456374 SYNJ2O15056 1496 aa18.96■□□□□ 0.63
STAG3L1-202ENST00000456374 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
STAG3L1-202ENST00000456374 OSCARQ8IYS5 282 aa18.92■□□□□ 0.62
STAG3L1-202ENST00000456374 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
STAG3L1-202ENST00000456374 FBLN2P98095 1184 aa18.91■□□□□ 0.62
STAG3L1-202ENST00000456374 EEA1Q15075 1411 aa18.9■□□□□ 0.62
STAG3L1-202ENST00000456374 CHMP7Q8WUX9 453 aaPredicted RBP18.88■□□□□ 0.61
STAG3L1-202ENST00000456374 GRIN2AQ12879 1464 aa18.88■□□□□ 0.61
STAG3L1-202ENST00000456374 IGF1RP08069 1367 aa18.87■□□□□ 0.61
STAG3L1-202ENST00000456374 CARMIL1Q5VZK9 1371 aa18.81■□□□□ 0.6
STAG3L1-202ENST00000456374 RIMBP3CA6NJZ7 1639 aa18.81■□□□□ 0.6
STAG3L1-202ENST00000456374 RIMBP3BA6NNM3 1639 aa18.81■□□□□ 0.6
STAG3L1-202ENST00000456374 RIMBP3Q9UFD9 1639 aa18.81■□□□□ 0.6
STAG3L1-202ENST00000456374 CEP170Q5SW79 1584 aa18.8■□□□□ 0.6
STAG3L1-202ENST00000456374 RAPGEF2Q9Y4G8 1499 aa18.78■□□□□ 0.6
STAG3L1-202ENST00000456374 FAM9AQ8IZU1 332 aaPredicted RBP18.78■□□□□ 0.6
STAG3L1-202ENST00000456374 CLASP1Q7Z460 1538 aa18.76■□□□□ 0.59
STAG3L1-202ENST00000456374 CTTNBP2Q8WZ74 1663 aa18.76■□□□□ 0.59
STAG3L1-202ENST00000456374 ARHGEF11O15085 1522 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 1034.8 ms