RNA–Protein interactions for RNA: ENST00000456291.1

PHF19-207, Transcript of PHD finger protein 19, humanhuman

TSL 3

Gene PHF19, Length 888 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF19-207ENST00000456291 NISCHQ9Y2I1 1504 aa59.39■■■■■ 7.1
PHF19-207ENST00000456291 CCDC180Q9P1Z9 1646 aa53.24■■■■■ 6.11
PHF19-207ENST00000456291 ABCC9O60706 1549 aa53.22■■■■■ 6.11
PHF19-207ENST00000456291 RB1CC1Q8TDY2 1594 aa50.66■■■■■ 5.7
PHF19-207ENST00000456291 NACADO15069 1562 aa50.35■■■■■ 5.65
PHF19-207ENST00000456291 DCAF8L2P0C7V8 631 aa50.03■■■■■ 5.6
PHF19-207ENST00000456291 DNAJC5BQ9UF47 199 aa50.03■■■■■ 5.6
PHF19-207ENST00000456291 MYO15BQ96JP2 1530 aa49.7■■■■■ 5.55
PHF19-207ENST00000456291 UNC13AQ9UPW8 1703 aa49.58■■■■■ 5.53
PHF19-207ENST00000456291 PABPN1Q86U42 306 aaKnown RBP eCLIP49.58■■■■■ 5.53
PHF19-207ENST00000456291 BICRAQ9NZM4 1560 aa49.28■■■■■ 5.48
PHF19-207ENST00000456291 ZCCHC6Q5VYS8 1495 aaKnown RBP49.21■■■■■ 5.47
PHF19-207ENST00000456291 DCAF1Q9Y4B6 1507 aa49.08■■■■■ 5.45
PHF19-207ENST00000456291 SHROOM4Q9ULL8 1493 aa48.55■■■■■ 5.36
PHF19-207ENST00000456291 SCRIBQ14160 1630 aa48.48■■■■■ 5.35
PHF19-207ENST00000456291 CC2D2AQ9P2K1 1620 aa48.1■■■■■ 5.29
PHF19-207ENST00000456291 EIF4G1Q04637 1599 aaKnown RBP48■■■■■ 5.28
PHF19-207ENST00000456291 CECR2Q9BXF3 1484 aa47.95■■■■■ 5.27
PHF19-207ENST00000456291 NCAPD3P42695 1498 aa46.52■■■■■ 5.04
PHF19-207ENST00000456291 ATAD2BQ9ULI0 1458 aa46.37■■■■■ 5.01
PHF19-207ENST00000456291 SMARCA4P51532 1647 aa46.3■■■■■ 5
PHF19-207ENST00000456291 SMARCA2P51531 1590 aa46.19■■■■■ 4.99
PHF19-207ENST00000456291 HMGXB3Q12766 1538 aa46.13■■■■■ 4.98
PHF19-207ENST00000456291 BAZ1AQ9NRL2 1556 aaPredicted RBP46.05■■■■■ 4.96
PHF19-207ENST00000456291 PEG3Q9GZU2 1588 aa45.9■■■■■ 4.94
PHF19-207ENST00000456291 DNAJC5Q9H3Z4 198 aa45.9■■■■■ 4.94
PHF19-207ENST00000456291 ERCC6Q03468 1493 aa45.89■■■■■ 4.94
PHF19-207ENST00000456291 CUX2O14529 1486 aa45.87■■■■■ 4.93
PHF19-207ENST00000456291 BAZ1BQ9UIG0 1483 aaKnown RBP45.87■■■■■ 4.93
PHF19-207ENST00000456291 MROH2BQ7Z745 1585 aa45.76■■■■■ 4.92
PHF19-207ENST00000456291 NESP48681 1621 aa45.76■■■■■ 4.92
PHF19-207ENST00000456291 LAMC3Q9Y6N6 1575 aa45.42■■■■■ 4.86
PHF19-207ENST00000456291 THOC2Q8NI27 1593 aaKnown RBP45.28■■■■■ 4.84
PHF19-207ENST00000456291 WIZO95785 1651 aa45.2■■■■■ 4.83
PHF19-207ENST00000456291 KIF21AQ7Z4S6 1674 aa45.15■■■■■ 4.82
PHF19-207ENST00000456291 PDS5BQ9NTI5 1447 aa45.15■■■■■ 4.82
PHF19-207ENST00000456291 CADPSQ9ULU8 1353 aa45.08■■■■■ 4.81
PHF19-207ENST00000456291 RSF1Q96T23 1441 aaPredicted RBP44.84■■■■■ 4.77
PHF19-207ENST00000456291 MRC2Q9UBG0 1479 aa44.76■■■■■ 4.76
PHF19-207ENST00000456291 WDR62O43379 1518 aa44.66■■■■■ 4.74
PHF19-207ENST00000456291 TOP2AP11388 1531 aaKnown RBP44.6■■■■■ 4.73
PHF19-207ENST00000456291 CFTRP13569 1480 aa44.59■■■■■ 4.73
PHF19-207ENST00000456291 CEP164Q9UPV0 1460 aa44.57■■■■■ 4.73
PHF19-207ENST00000456291 FANCD2Q9BXW9 1451 aa44.54■■■■■ 4.72
PHF19-207ENST00000456291 URB2Q14146 1524 aaKnown RBP44.21■■■■■ 4.67
PHF19-207ENST00000456291 CCDC88BA6NC98 1476 aa44.15■■■■■ 4.66
PHF19-207ENST00000456291 PRDM2Q13029 1718 aa44.1■■■■■ 4.65
PHF19-207ENST00000456291 OSCARQ8IYS5 282 aa43.79■■■■■ 4.6
PHF19-207ENST00000456291 TRIM41Q8WV44 630 aa43.78■■■■■ 4.6
PHF19-207ENST00000456291 TOPBP1Q92547 1522 aa43.72■■■■■ 4.59
PHF19-207ENST00000456291 IFT140Q96RY7 1462 aa43.7■■■■■ 4.59
PHF19-207ENST00000456291 ZNF608Q9ULD9 1512 aaPredicted RBP43.66■■■■■ 4.58
PHF19-207ENST00000456291 ABCC8Q09428 1581 aa43.61■■■■■ 4.57
PHF19-207ENST00000456291 DNMBPQ6XZF7 1577 aa43.54■■■■■ 4.56
PHF19-207ENST00000456291 EIF4G3O43432 1585 aaKnown RBP43.37■■■■■ 4.53
PHF19-207ENST00000456291 TARBP1Q13395 1621 aaKnown RBP43.36■■■■■ 4.53
PHF19-207ENST00000456291 POLA1P09884 1462 aaPredicted RBP43.27■■■■■ 4.52
PHF19-207ENST00000456291 AQRO60306 1485 aaKnown RBP eCLIP43.25■■■■■ 4.516e-7■■■□□ 19
PHF19-207ENST00000456291 RIMBP3CA6NJZ7 1639 aa43.22■■■■■ 4.51
PHF19-207ENST00000456291 RIMBP3BA6NNM3 1639 aa43.22■■■■■ 4.51
PHF19-207ENST00000456291 RIMBP3Q9UFD9 1639 aa43.22■■■■■ 4.51
PHF19-207ENST00000456291 RAD54L2Q9Y4B4 1467 aa43.12■■■■■ 4.49
PHF19-207ENST00000456291 ARHGEF11O15085 1522 aa43.07■■■■■ 4.49
PHF19-207ENST00000456291 SOGA1O94964 1423 aa43.07■■■■■ 4.49
PHF19-207ENST00000456291 CHD1O14646 1710 aa43.06■■■■■ 4.48
PHF19-207ENST00000456291 TDRD9Q8NDG6 1382 aaKnown RBP42.99■■■■■ 4.47
PHF19-207ENST00000456291 FGD5Q6ZNL6 1462 aa42.99■■■■■ 4.47
PHF19-207ENST00000456291 CUX1P39880 1505 aa42.98■■■■■ 4.47
PHF19-207ENST00000456291 FBLN2P98095 1184 aa42.9■■■■■ 4.46
PHF19-207ENST00000456291 WDR97A6NE52 1622 aa42.87■■■■■ 4.45
PHF19-207ENST00000456291 SUPT5HO00267 1087 aaKnown RBP42.78■■■■■ 4.44
PHF19-207ENST00000456291 SNAPC4Q5SXM2 1469 aa42.78■■■■■ 4.44
PHF19-207ENST00000456291 CYB5RLQ6IPT4 315 aa42.76■■■■■ 4.44
PHF19-207ENST00000456291 GRIN2BQ13224 1484 aa42.68■■■■■ 4.42
PHF19-207ENST00000456291 MAGI1Q96QZ7 1491 aaPredicted RBP42.68■■■■■ 4.42
PHF19-207ENST00000456291 ARAP1Q96P48 1450 aa42.68■■■■■ 4.42
PHF19-207ENST00000456291 CHMP7Q8WUX9 453 aaPredicted RBP42.62■■■■■ 4.41
PHF19-207ENST00000456291 CLASP1Q7Z460 1538 aa42.6■■■■■ 4.41
PHF19-207ENST00000456291 SYNJ2O15056 1496 aa42.55■■■■■ 4.4
PHF19-207ENST00000456291 GAPVD1Q14C86 1478 aa42.55■■■■■ 4.4
PHF19-207ENST00000456291 ABCA10Q8WWZ4 1543 aa42.52■■■■■ 4.4
PHF19-207ENST00000456291 SYNJ1O43426 1573 aa42.52■■■■■ 4.4
PHF19-207ENST00000456291 PBRM1Q86U86 1689 aa42.51■■■■■ 4.39
PHF19-207ENST00000456291 ABCA5Q8WWZ7 1642 aa42.45■■■■■ 4.39
PHF19-207ENST00000456291 WRNQ14191 1432 aaPredicted RBP eCLIP42.33■■■■■ 4.37
PHF19-207ENST00000456291 TOP2BQ02880 1626 aa42.29■■■■■ 4.36
PHF19-207ENST00000456291 BIVM-ERCC5R4GMW8 1640 aa42.29■■■■■ 4.36
PHF19-207ENST00000456291 TRHP20396 242 aaPredicted RBP42.22■■■■■ 4.35
PHF19-207ENST00000456291 GRIN2AQ12879 1464 aa42.14■■■■■ 4.34
PHF19-207ENST00000456291 ADAMTS12P58397 1594 aa42.1■■■■■ 4.33
PHF19-207ENST00000456291 NUP160Q12769 1436 aa42.03■■■■■ 4.32
PHF19-207ENST00000456291 FHAD1B1AJZ9 1412 aa42.01■■■■■ 4.32
PHF19-207ENST00000456291 CEP170Q5SW79 1584 aa42■■■■■ 4.31
PHF19-207ENST00000456291 ERICH3Q5RHP9 1530 aa41.98■■■■■ 4.31
PHF19-207ENST00000456291 ERCC6L2Q5T890 1561 aa41.95■■■■■ 4.31
PHF19-207ENST00000456291 SHROOM2Q13796 1616 aa41.84■■■■■ 4.29
PHF19-207ENST00000456291 JPH4Q96JJ6 628 aa41.61■■■■■ 4.25
PHF19-207ENST00000456291 PRG4Q92954 1404 aaPredicted RBP41.59■■■■■ 4.25
PHF19-207ENST00000456291 RUSC2Q8N2Y8 1516 aa41.51■■■■■ 4.24
PHF19-207ENST00000456291 IGF1RP08069 1367 aa41.5■■■■■ 4.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms