RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 NISCHQ9Y2I1 1504 aa54.38■■■■■ 6.3
SEC22C-213ENST00000456222 CCDC180Q9P1Z9 1646 aa48.65■■■■■ 5.38
SEC22C-213ENST00000456222 ABCC9O60706 1549 aa48.48■■■■■ 5.35
SEC22C-213ENST00000456222 RB1CC1Q8TDY2 1594 aa46.18■■■■■ 4.98
SEC22C-213ENST00000456222 NACADO15069 1562 aa45.92■■■■■ 4.94
SEC22C-213ENST00000456222 DCAF8L2P0C7V8 631 aa45.75■■■■■ 4.91
SEC22C-213ENST00000456222 MYO15BQ96JP2 1530 aa45.34■■■■■ 4.85
SEC22C-213ENST00000456222 DNAJC5BQ9UF47 199 aa45.32■■■■■ 4.85
SEC22C-213ENST00000456222 UNC13AQ9UPW8 1703 aa45.29■■■■■ 4.84
SEC22C-213ENST00000456222 PABPN1Q86U42 306 aaKnown RBP eCLIP45.18■■■■■ 4.82
SEC22C-213ENST00000456222 ZCCHC6Q5VYS8 1495 aaKnown RBP45.13■■■■■ 4.82
SEC22C-213ENST00000456222 BICRAQ9NZM4 1560 aa44.94■■■■■ 4.79
SEC22C-213ENST00000456222 DCAF1Q9Y4B6 1507 aa44.88■■■■■ 4.78
SEC22C-213ENST00000456222 SCRIBQ14160 1630 aa44.43■■■■■ 4.7
SEC22C-213ENST00000456222 SHROOM4Q9ULL8 1493 aa44.18■■■■■ 4.66
SEC22C-213ENST00000456222 CC2D2AQ9P2K1 1620 aa43.81■■■■■ 4.6
SEC22C-213ENST00000456222 EIF4G1Q04637 1599 aaKnown RBP43.76■■■■■ 4.6
SEC22C-213ENST00000456222 CECR2Q9BXF3 1484 aa43.6■■■■■ 4.57
SEC22C-213ENST00000456222 NCAPD3P42695 1498 aa42.41■■■■■ 4.38
SEC22C-213ENST00000456222 SMARCA4P51532 1647 aa42.38■■■■■ 4.38
SEC22C-213ENST00000456222 ATAD2BQ9ULI0 1458 aa42.35■■■■■ 4.37
SEC22C-213ENST00000456222 SMARCA2P51531 1590 aa42.18■■■■■ 4.34
SEC22C-213ENST00000456222 BAZ1AQ9NRL2 1556 aaPredicted RBP42.15■■■■■ 4.34
SEC22C-213ENST00000456222 HMGXB3Q12766 1538 aa42.11■■■■■ 4.33
SEC22C-213ENST00000456222 MROH2BQ7Z745 1585 aa41.96■■■■■ 4.31
SEC22C-213ENST00000456222 PEG3Q9GZU2 1588 aa41.94■■■■■ 4.3
SEC22C-213ENST00000456222 BAZ1BQ9UIG0 1483 aaKnown RBP41.92■■■■■ 4.3
SEC22C-213ENST00000456222 NESP48681 1621 aa41.77■■■■■ 4.28
SEC22C-213ENST00000456222 ERCC6Q03468 1493 aa41.75■■■■■ 4.27
SEC22C-213ENST00000456222 CUX2O14529 1486 aa41.58■■■■■ 4.25
SEC22C-213ENST00000456222 WIZO95785 1651 aa41.49■■■■■ 4.23
SEC22C-213ENST00000456222 LAMC3Q9Y6N6 1575 aa41.4■■■■■ 4.22
SEC22C-213ENST00000456222 DNAJC5Q9H3Z4 198 aa41.3■■■■■ 4.2
SEC22C-213ENST00000456222 THOC2Q8NI27 1593 aaKnown RBP41.26■■■■■ 4.2
SEC22C-213ENST00000456222 KIF21AQ7Z4S6 1674 aa41.23■■■■■ 4.19
SEC22C-213ENST00000456222 RSF1Q96T23 1441 aaPredicted RBP41.15■■■■■ 4.18
SEC22C-213ENST00000456222 CADPSQ9ULU8 1353 aa41.12■■■■■ 4.17
SEC22C-213ENST00000456222 PDS5BQ9NTI5 1447 aa41.11■■■■■ 4.17
SEC22C-213ENST00000456222 TOP2AP11388 1531 aaKnown RBP40.91■■■■■ 4.14
SEC22C-213ENST00000456222 MRC2Q9UBG0 1479 aa40.79■■■■■ 4.12
SEC22C-213ENST00000456222 CFTRP13569 1480 aa40.73■■■■■ 4.11
SEC22C-213ENST00000456222 WDR62O43379 1518 aa40.71■■■■■ 4.11
SEC22C-213ENST00000456222 FANCD2Q9BXW9 1451 aa40.68■■■■■ 4.1
SEC22C-213ENST00000456222 CEP164Q9UPV0 1460 aa40.68■■■■■ 4.1
SEC22C-213ENST00000456222 CCDC88BA6NC98 1476 aa40.47■■■■■ 4.07
SEC22C-213ENST00000456222 URB2Q14146 1524 aaKnown RBP40.39■■■■■ 4.06
SEC22C-213ENST00000456222 PRDM2Q13029 1718 aa40.37■■■■■ 4.05
SEC22C-213ENST00000456222 TOPBP1Q92547 1522 aa39.96■■■■□ 3.99
SEC22C-213ENST00000456222 ZNF608Q9ULD9 1512 aaPredicted RBP39.86■■■■□ 3.97
SEC22C-213ENST00000456222 IFT140Q96RY7 1462 aa39.84■■■■□ 3.97
SEC22C-213ENST00000456222 DNMBPQ6XZF7 1577 aa39.81■■■■□ 3.96
SEC22C-213ENST00000456222 ABCC8Q09428 1581 aa39.77■■■■□ 3.96
SEC22C-213ENST00000456222 OSCARQ8IYS5 282 aa39.71■■■■□ 3.95
SEC22C-213ENST00000456222 EIF4G3O43432 1585 aaKnown RBP39.63■■■■□ 3.93
SEC22C-213ENST00000456222 TARBP1Q13395 1621 aaKnown RBP39.62■■■■□ 3.93
SEC22C-213ENST00000456222 TRIM41Q8WV44 630 aa39.62■■■■□ 3.93
SEC22C-213ENST00000456222 POLA1P09884 1462 aaPredicted RBP39.57■■■■□ 3.93
SEC22C-213ENST00000456222 SUPT5HO00267 1087 aaKnown RBP39.5■■■■□ 3.91
SEC22C-213ENST00000456222 AQRO60306 1485 aaKnown RBP eCLIP39.49■■■■□ 3.91
SEC22C-213ENST00000456222 RAD54L2Q9Y4B4 1467 aa39.46■■■■□ 3.91
SEC22C-213ENST00000456222 CUX1P39880 1505 aa39.4■■■■□ 3.9
SEC22C-213ENST00000456222 FGD5Q6ZNL6 1462 aa39.37■■■■□ 3.89
SEC22C-213ENST00000456222 SOGA1O94964 1423 aa39.35■■■■□ 3.89
SEC22C-213ENST00000456222 CHD1O14646 1710 aa39.31■■■■□ 3.88
SEC22C-213ENST00000456222 TDRD9Q8NDG6 1382 aaKnown RBP39.29■■■■□ 3.88
SEC22C-213ENST00000456222 RIMBP3CA6NJZ7 1639 aa39.28■■■■□ 3.88
SEC22C-213ENST00000456222 RIMBP3BA6NNM3 1639 aa39.28■■■■□ 3.88
SEC22C-213ENST00000456222 RIMBP3Q9UFD9 1639 aa39.28■■■■□ 3.88
SEC22C-213ENST00000456222 ARHGEF11O15085 1522 aa39.15■■■■□ 3.86
SEC22C-213ENST00000456222 FBLN2P98095 1184 aa39.12■■■■□ 3.85
SEC22C-213ENST00000456222 WDR97A6NE52 1622 aa39.11■■■■□ 3.85
SEC22C-213ENST00000456222 SNAPC4Q5SXM2 1469 aa39.09■■■■□ 3.85
SEC22C-213ENST00000456222 GRIN2BQ13224 1484 aa38.98■■■■□ 3.83
SEC22C-213ENST00000456222 MAGI1Q96QZ7 1491 aaPredicted RBP38.94■■■■□ 3.82
SEC22C-213ENST00000456222 PBRM1Q86U86 1689 aa38.91■■■■□ 3.82
SEC22C-213ENST00000456222 ABCA10Q8WWZ4 1543 aa38.9■■■■□ 3.82
SEC22C-213ENST00000456222 GAPVD1Q14C86 1478 aa38.89■■■■□ 3.82
SEC22C-213ENST00000456222 ABCA5Q8WWZ7 1642 aa38.86■■■■□ 3.81
SEC22C-213ENST00000456222 CHMP7Q8WUX9 453 aaPredicted RBP38.84■■■■□ 3.81
SEC22C-213ENST00000456222 CLASP1Q7Z460 1538 aa38.84■■■■□ 3.81
SEC22C-213ENST00000456222 SYNJ2O15056 1496 aa38.82■■■■□ 3.81
SEC22C-213ENST00000456222 ARAP1Q96P48 1450 aa38.82■■■■□ 3.81
SEC22C-213ENST00000456222 CYB5RLQ6IPT4 315 aa38.82■■■■□ 3.8
SEC22C-213ENST00000456222 SYNJ1O43426 1573 aa38.82■■■■□ 3.8
SEC22C-213ENST00000456222 BIVM-ERCC5R4GMW8 1640 aa38.81■■■■□ 3.8
SEC22C-213ENST00000456222 TOP2BQ02880 1626 aa38.79■■■■□ 3.8
SEC22C-213ENST00000456222 WRNQ14191 1432 aaPredicted RBP eCLIP38.77■■■■□ 3.8
SEC22C-213ENST00000456222 ADAMTS12P58397 1594 aa38.55■■■■□ 3.76
SEC22C-213ENST00000456222 GRIN2AQ12879 1464 aa38.51■■■■□ 3.76
SEC22C-213ENST00000456222 CEP170Q5SW79 1584 aa38.4■■■■□ 3.74
SEC22C-213ENST00000456222 ERICH3Q5RHP9 1530 aa38.39■■■■□ 3.74
SEC22C-213ENST00000456222 FHAD1B1AJZ9 1412 aa38.38■■■■□ 3.74
SEC22C-213ENST00000456222 NUP160Q12769 1436 aa38.37■■■■□ 3.73
SEC22C-213ENST00000456222 ERCC6L2Q5T890 1561 aa38.33■■■■□ 3.73
SEC22C-213ENST00000456222 TRHP20396 242 aaPredicted RBP38.26■■■■□ 3.72
SEC22C-213ENST00000456222 SHROOM2Q13796 1616 aa38.2■■■■□ 3.7
SEC22C-213ENST00000456222 IGF1RP08069 1367 aa38■■■■□ 3.67
SEC22C-213ENST00000456222 RUSC2Q8N2Y8 1516 aa38■■■■□ 3.67
SEC22C-213ENST00000456222 KIF27Q86VH2 1401 aa37.99■■■■□ 3.67
SEC22C-213ENST00000456222 PRG4Q92954 1404 aaPredicted RBP37.96■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms