RNA–Protein interactions for RNA: ENST00000456164.5

FBXO42-203, Transcript of F-box protein 42, humanhuman

TSL 2

Gene FBXO42, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42-203ENST00000456164 NISCHQ9Y2I1 1504 aa31.37■■■□□ 2.61
FBXO42-203ENST00000456164 ABCC9O60706 1549 aa28.21■■■□□ 2.11
FBXO42-203ENST00000456164 CCDC180Q9P1Z9 1646 aa28.17■■■□□ 2.1
FBXO42-203ENST00000456164 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
FBXO42-203ENST00000456164 NACADO15069 1562 aa26.66■■□□□ 1.86
FBXO42-203ENST00000456164 DCAF8L2P0C7V8 631 aa26.64■■□□□ 1.86
FBXO42-203ENST00000456164 DNAJC5BQ9UF47 199 aa26.34■■□□□ 1.81
FBXO42-203ENST00000456164 PABPN1Q86U42 306 aaKnown RBP eCLIP26.26■■□□□ 1.79
FBXO42-203ENST00000456164 MYO15BQ96JP2 1530 aa26.25■■□□□ 1.79
FBXO42-203ENST00000456164 UNC13AQ9UPW8 1703 aa26.1■■□□□ 1.77
FBXO42-203ENST00000456164 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
FBXO42-203ENST00000456164 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.74
FBXO42-203ENST00000456164 DCAF1Q9Y4B6 1507 aa25.9■■□□□ 1.74
FBXO42-203ENST00000456164 SHROOM4Q9ULL8 1493 aa25.73■■□□□ 1.71
FBXO42-203ENST00000456164 SCRIBQ14160 1630 aa25.69■■□□□ 1.7
FBXO42-203ENST00000456164 CC2D2AQ9P2K1 1620 aa25.45■■□□□ 1.66
FBXO42-203ENST00000456164 CECR2Q9BXF3 1484 aa25.42■■□□□ 1.66
FBXO42-203ENST00000456164 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.66
FBXO42-203ENST00000456164 NCAPD3P42695 1498 aa24.58■■□□□ 1.52
FBXO42-203ENST00000456164 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
FBXO42-203ENST00000456164 SMARCA2P51531 1590 aa24.49■■□□□ 1.51
FBXO42-203ENST00000456164 SMARCA4P51532 1647 aa24.47■■□□□ 1.51
FBXO42-203ENST00000456164 ERCC6Q03468 1493 aa24.45■■□□□ 1.51
FBXO42-203ENST00000456164 HMGXB3Q12766 1538 aa24.4■■□□□ 1.5
FBXO42-203ENST00000456164 BAZ1AQ9NRL2 1556 aaPredicted RBP24.4■■□□□ 1.5
FBXO42-203ENST00000456164 CUX2O14529 1486 aa24.34■■□□□ 1.49
FBXO42-203ENST00000456164 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.49
FBXO42-203ENST00000456164 DNAJC5Q9H3Z4 198 aa24.3■■□□□ 1.48
FBXO42-203ENST00000456164 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.47
FBXO42-203ENST00000456164 NESP48681 1621 aa24.17■■□□□ 1.46
FBXO42-203ENST00000456164 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
FBXO42-203ENST00000456164 LAMC3Q9Y6N6 1575 aa24.07■■□□□ 1.44
FBXO42-203ENST00000456164 PDS5BQ9NTI5 1447 aa23.98■■□□□ 1.43
FBXO42-203ENST00000456164 THOC2Q8NI27 1593 aaKnown RBP23.92■■□□□ 1.42
FBXO42-203ENST00000456164 CADPSQ9ULU8 1353 aa23.87■■□□□ 1.41
FBXO42-203ENST00000456164 WIZO95785 1651 aa23.86■■□□□ 1.41
FBXO42-203ENST00000456164 KIF21AQ7Z4S6 1674 aa23.86■■□□□ 1.41
FBXO42-203ENST00000456164 MRC2Q9UBG0 1479 aa23.74■■□□□ 1.39
FBXO42-203ENST00000456164 CEP164Q9UPV0 1460 aa23.66■■□□□ 1.38
FBXO42-203ENST00000456164 RSF1Q96T23 1441 aaPredicted RBP23.66■■□□□ 1.38
FBXO42-203ENST00000456164 WDR62O43379 1518 aa23.63■■□□□ 1.37
FBXO42-203ENST00000456164 FANCD2Q9BXW9 1451 aa23.61■■□□□ 1.37
FBXO42-203ENST00000456164 TOP2AP11388 1531 aaKnown RBP23.6■■□□□ 1.37
FBXO42-203ENST00000456164 CFTRP13569 1480 aa23.56■■□□□ 1.36
FBXO42-203ENST00000456164 URB2Q14146 1524 aaKnown RBP23.35■■□□□ 1.33
FBXO42-203ENST00000456164 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
FBXO42-203ENST00000456164 CCDC88BA6NC98 1476 aa23.31■■□□□ 1.32
FBXO42-203ENST00000456164 PRDM2Q13029 1718 aa23.3■■□□□ 1.32
FBXO42-203ENST00000456164 OSCARQ8IYS5 282 aa23.26■■□□□ 1.31
FBXO42-203ENST00000456164 IFT140Q96RY7 1462 aa23.17■■□□□ 1.3
FBXO42-203ENST00000456164 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
FBXO42-203ENST00000456164 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
FBXO42-203ENST00000456164 ZNF608Q9ULD9 1512 aaPredicted RBP23.07■■□□□ 1.28
FBXO42-203ENST00000456164 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
FBXO42-203ENST00000456164 EIF4G3O43432 1585 aaKnown RBP22.97■■□□□ 1.27
FBXO42-203ENST00000456164 AQRO60306 1485 aaKnown RBP eCLIP22.89■■□□□ 1.251e-6■■■■□ 21.3
FBXO42-203ENST00000456164 POLA1P09884 1462 aaPredicted RBP22.88■■□□□ 1.25
FBXO42-203ENST00000456164 RIMBP3CA6NJZ7 1639 aa22.87■■□□□ 1.25
FBXO42-203ENST00000456164 RIMBP3BA6NNM3 1639 aa22.87■■□□□ 1.25
FBXO42-203ENST00000456164 TARBP1Q13395 1621 aaKnown RBP22.87■■□□□ 1.25
FBXO42-203ENST00000456164 RIMBP3Q9UFD9 1639 aa22.87■■□□□ 1.25
FBXO42-203ENST00000456164 FBLN2P98095 1184 aa22.87■■□□□ 1.25
FBXO42-203ENST00000456164 SOGA1O94964 1423 aa22.83■■□□□ 1.25
FBXO42-203ENST00000456164 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
FBXO42-203ENST00000456164 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
FBXO42-203ENST00000456164 CHD1O14646 1710 aa22.77■■□□□ 1.24
FBXO42-203ENST00000456164 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
FBXO42-203ENST00000456164 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
FBXO42-203ENST00000456164 WDR97A6NE52 1622 aa22.73■■□□□ 1.23
FBXO42-203ENST00000456164 SUPT5HO00267 1087 aaKnown RBP22.72■■□□□ 1.23
FBXO42-203ENST00000456164 CYB5RLQ6IPT4 315 aa22.71■■□□□ 1.23
FBXO42-203ENST00000456164 CUX1P39880 1505 aa22.69■■□□□ 1.22
FBXO42-203ENST00000456164 SNAPC4Q5SXM2 1469 aa22.68■■□□□ 1.22
FBXO42-203ENST00000456164 CHMP7Q8WUX9 453 aaPredicted RBP22.68■■□□□ 1.22
FBXO42-203ENST00000456164 GRIN2BQ13224 1484 aa22.64■■□□□ 1.21
FBXO42-203ENST00000456164 MAGI1Q96QZ7 1491 aaPredicted RBP22.64■■□□□ 1.21
FBXO42-203ENST00000456164 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
FBXO42-203ENST00000456164 ARAP1Q96P48 1450 aa22.57■■□□□ 1.2
FBXO42-203ENST00000456164 SYNJ2O15056 1496 aa22.55■■□□□ 1.2
FBXO42-203ENST00000456164 TRHP20396 242 aaPredicted RBP22.55■■□□□ 1.2
FBXO42-203ENST00000456164 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
FBXO42-203ENST00000456164 CLASP1Q7Z460 1538 aa22.51■■□□□ 1.19
FBXO42-203ENST00000456164 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
FBXO42-203ENST00000456164 ABCA10Q8WWZ4 1543 aa22.49■■□□□ 1.19
FBXO42-203ENST00000456164 WRNQ14191 1432 aaPredicted RBP eCLIP22.47■■□□□ 1.19
FBXO42-203ENST00000456164 ABCA5Q8WWZ7 1642 aa22.43■■□□□ 1.18
FBXO42-203ENST00000456164 TOP2BQ02880 1626 aa22.35■■□□□ 1.17
FBXO42-203ENST00000456164 BIVM-ERCC5R4GMW8 1640 aa22.34■■□□□ 1.17
FBXO42-203ENST00000456164 GRIN2AQ12879 1464 aa22.33■■□□□ 1.16
FBXO42-203ENST00000456164 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
FBXO42-203ENST00000456164 FHAD1B1AJZ9 1412 aa22.27■■□□□ 1.16
FBXO42-203ENST00000456164 ERICH3Q5RHP9 1530 aa22.23■■□□□ 1.15
FBXO42-203ENST00000456164 NUP160Q12769 1436 aa22.22■■□□□ 1.15
FBXO42-203ENST00000456164 CEP170Q5SW79 1584 aa22.2■■□□□ 1.14
FBXO42-203ENST00000456164 ERCC6L2Q5T890 1561 aa22.12■■□□□ 1.13
FBXO42-203ENST00000456164 SHROOM2Q13796 1616 aa22.09■■□□□ 1.13
FBXO42-203ENST00000456164 PRG4Q92954 1404 aaPredicted RBP22.06■■□□□ 1.12
FBXO42-203ENST00000456164 JPH4Q96JJ6 628 aa22.04■■□□□ 1.12
FBXO42-203ENST00000456164 KIF27Q86VH2 1401 aa22■■□□□ 1.11
FBXO42-203ENST00000456164 RUSC2Q8N2Y8 1516 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms