RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 NISCHQ9Y2I1 1504 aa34.08■■■■□ 3.05
EPCAM-204ENST00000456133 ABCC9O60706 1549 aa31.15■■■□□ 2.58
EPCAM-204ENST00000456133 CCDC180Q9P1Z9 1646 aa30.79■■■□□ 2.52
EPCAM-204ENST00000456133 DNAJC5BQ9UF47 199 aa29.56■■■□□ 2.32
EPCAM-204ENST00000456133 RB1CC1Q8TDY2 1594 aa29.47■■■□□ 2.31
EPCAM-204ENST00000456133 NACADO15069 1562 aa29.16■■■□□ 2.26
EPCAM-204ENST00000456133 DCAF8L2P0C7V8 631 aa28.94■■■□□ 2.22
EPCAM-204ENST00000456133 PABPN1Q86U42 306 aaKnown RBP eCLIP28.93■■■□□ 2.22
EPCAM-204ENST00000456133 UNC13AQ9UPW8 1703 aa28.92■■■□□ 2.22
EPCAM-204ENST00000456133 BICRAQ9NZM4 1560 aa28.66■■■□□ 2.18
EPCAM-204ENST00000456133 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
EPCAM-204ENST00000456133 ZCCHC6Q5VYS8 1495 aaKnown RBP28.15■■■□□ 2.1
EPCAM-204ENST00000456133 SHROOM4Q9ULL8 1493 aa28.14■■■□□ 2.1
EPCAM-204ENST00000456133 CC2D2AQ9P2K1 1620 aa28.14■■■□□ 2.09
EPCAM-204ENST00000456133 DCAF1Q9Y4B6 1507 aa28.1■■■□□ 2.09
EPCAM-204ENST00000456133 CECR2Q9BXF3 1484 aa28.08■■■□□ 2.09
EPCAM-204ENST00000456133 SCRIBQ14160 1630 aa28.04■■■□□ 2.08
EPCAM-204ENST00000456133 EIF4G1Q04637 1599 aaKnown RBP27.96■■■□□ 2.07
EPCAM-204ENST00000456133 DNAJC5Q9H3Z4 198 aa27.4■■□□□ 1.98
EPCAM-204ENST00000456133 CUX2O14529 1486 aa26.97■■□□□ 1.91
EPCAM-204ENST00000456133 NCAPD3P42695 1498 aa26.91■■□□□ 1.9
EPCAM-204ENST00000456133 ERCC6Q03468 1493 aa26.91■■□□□ 1.9
EPCAM-204ENST00000456133 ATAD2BQ9ULI0 1458 aa26.78■■□□□ 1.88
EPCAM-204ENST00000456133 SMARCA4P51532 1647 aa26.7■■□□□ 1.86
EPCAM-204ENST00000456133 SMARCA2P51531 1590 aa26.69■■□□□ 1.86
EPCAM-204ENST00000456133 HMGXB3Q12766 1538 aa26.69■■□□□ 1.86
EPCAM-204ENST00000456133 NESP48681 1621 aa26.66■■□□□ 1.86
EPCAM-204ENST00000456133 BAZ1BQ9UIG0 1483 aaKnown RBP26.51■■□□□ 1.83
EPCAM-204ENST00000456133 THOC2Q8NI27 1593 aaKnown RBP26.48■■□□□ 1.83
EPCAM-204ENST00000456133 BAZ1AQ9NRL2 1556 aaPredicted RBP26.48■■□□□ 1.83
EPCAM-204ENST00000456133 PEG3Q9GZU2 1588 aa26.4■■□□□ 1.82
EPCAM-204ENST00000456133 LAMC3Q9Y6N6 1575 aa26.4■■□□□ 1.82
EPCAM-204ENST00000456133 KIF21AQ7Z4S6 1674 aa26.36■■□□□ 1.81
EPCAM-204ENST00000456133 MROH2BQ7Z745 1585 aa26.27■■□□□ 1.8
EPCAM-204ENST00000456133 PDS5BQ9NTI5 1447 aa26.22■■□□□ 1.79
EPCAM-204ENST00000456133 TRIM41Q8WV44 630 aa26.08■■□□□ 1.77
EPCAM-204ENST00000456133 CADPSQ9ULU8 1353 aa26.06■■□□□ 1.76
EPCAM-204ENST00000456133 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
EPCAM-204ENST00000456133 WDR62O43379 1518 aa25.99■■□□□ 1.75
EPCAM-204ENST00000456133 WIZO95785 1651 aa25.98■■□□□ 1.75
EPCAM-204ENST00000456133 CEP164Q9UPV0 1460 aa25.87■■□□□ 1.73
EPCAM-204ENST00000456133 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
EPCAM-204ENST00000456133 CFTRP13569 1480 aa25.69■■□□□ 1.7
EPCAM-204ENST00000456133 OSCARQ8IYS5 282 aa25.67■■□□□ 1.7
EPCAM-204ENST00000456133 URB2Q14146 1524 aaKnown RBP25.63■■□□□ 1.69
EPCAM-204ENST00000456133 TOP2AP11388 1531 aaKnown RBP25.58■■□□□ 1.68
EPCAM-204ENST00000456133 RSF1Q96T23 1441 aaPredicted RBP25.56■■□□□ 1.68
EPCAM-204ENST00000456133 PRDM2Q13029 1718 aa25.53■■□□□ 1.68
EPCAM-204ENST00000456133 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.67
EPCAM-204ENST00000456133 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.67
EPCAM-204ENST00000456133 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.67
EPCAM-204ENST00000456133 ZNF608Q9ULD9 1512 aaPredicted RBP25.37■■□□□ 1.65
EPCAM-204ENST00000456133 IFT140Q96RY7 1462 aa25.35■■□□□ 1.65
EPCAM-204ENST00000456133 ARHGEF11O15085 1522 aa25.29■■□□□ 1.64
EPCAM-204ENST00000456133 CCDC88BA6NC98 1476 aa25.29■■□□□ 1.64
EPCAM-204ENST00000456133 TOPBP1Q92547 1522 aa25.28■■□□□ 1.64
EPCAM-204ENST00000456133 EIF4G3O43432 1585 aaKnown RBP25.23■■□□□ 1.63
EPCAM-204ENST00000456133 CHD1O14646 1710 aa25.18■■□□□ 1.62
EPCAM-204ENST00000456133 ABCC8Q09428 1581 aa25.16■■□□□ 1.62
EPCAM-204ENST00000456133 DNMBPQ6XZF7 1577 aa25.16■■□□□ 1.62
EPCAM-204ENST00000456133 CYB5RLQ6IPT4 315 aa25.12■■□□□ 1.61
EPCAM-204ENST00000456133 TARBP1Q13395 1621 aaKnown RBP25.1■■□□□ 1.61
EPCAM-204ENST00000456133 AQRO60306 1485 aaKnown RBP eCLIP25.08■■□□□ 1.618e-7■■■□□ 16.1
EPCAM-204ENST00000456133 ARAP1Q96P48 1450 aa25.02■■□□□ 1.6
EPCAM-204ENST00000456133 FBLN2P98095 1184 aa25■■□□□ 1.59
EPCAM-204ENST00000456133 POLA1P09884 1462 aaPredicted RBP24.98■■□□□ 1.59
EPCAM-204ENST00000456133 TRHP20396 242 aaPredicted RBP24.97■■□□□ 1.59
EPCAM-204ENST00000456133 RAD54L2Q9Y4B4 1467 aa24.92■■□□□ 1.58
EPCAM-204ENST00000456133 TDRD9Q8NDG6 1382 aaKnown RBP24.86■■□□□ 1.57
EPCAM-204ENST00000456133 SOGA1O94964 1423 aa24.86■■□□□ 1.57
EPCAM-204ENST00000456133 SNAPC4Q5SXM2 1469 aa24.82■■□□□ 1.56
EPCAM-204ENST00000456133 CLASP1Q7Z460 1538 aa24.8■■□□□ 1.56
EPCAM-204ENST00000456133 WDR97A6NE52 1622 aa24.78■■□□□ 1.56
EPCAM-204ENST00000456133 FGD5Q6ZNL6 1462 aa24.78■■□□□ 1.56
EPCAM-204ENST00000456133 SYNJ1O43426 1573 aa24.75■■□□□ 1.55
EPCAM-204ENST00000456133 CHMP7Q8WUX9 453 aaPredicted RBP24.73■■□□□ 1.55
EPCAM-204ENST00000456133 MAGI1Q96QZ7 1491 aaPredicted RBP24.72■■□□□ 1.55
EPCAM-204ENST00000456133 CUX1P39880 1505 aa24.71■■□□□ 1.55
EPCAM-204ENST00000456133 GRIN2BQ13224 1484 aa24.68■■□□□ 1.54
EPCAM-204ENST00000456133 PBRM1Q86U86 1689 aa24.65■■□□□ 1.54
EPCAM-204ENST00000456133 SYNJ2O15056 1496 aa24.64■■□□□ 1.54
EPCAM-204ENST00000456133 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
EPCAM-204ENST00000456133 AEBP2Q6ZN18 517 aaPredicted RBP24.53■■□□□ 1.52
EPCAM-204ENST00000456133 ABCA5Q8WWZ7 1642 aa24.49■■□□□ 1.51
EPCAM-204ENST00000456133 ABCA10Q8WWZ4 1543 aa24.46■■□□□ 1.51
EPCAM-204ENST00000456133 ERCC6L2Q5T890 1561 aa24.42■■□□□ 1.5
EPCAM-204ENST00000456133 GRIN2AQ12879 1464 aa24.37■■□□□ 1.49
EPCAM-204ENST00000456133 ADAMTS12P58397 1594 aa24.33■■□□□ 1.49
EPCAM-204ENST00000456133 CEP170Q5SW79 1584 aa24.33■■□□□ 1.49
EPCAM-204ENST00000456133 NUP160Q12769 1436 aa24.29■■□□□ 1.48
EPCAM-204ENST00000456133 SHROOM2Q13796 1616 aa24.27■■□□□ 1.48
EPCAM-204ENST00000456133 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
EPCAM-204ENST00000456133 BIVM-ERCC5R4GMW8 1640 aa24.24■■□□□ 1.47
EPCAM-204ENST00000456133 KIF13AQ9H1H9 1805 aa24.23■■□□□ 1.47
EPCAM-204ENST00000456133 FHAD1B1AJZ9 1412 aa24.21■■□□□ 1.47
EPCAM-204ENST00000456133 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
EPCAM-204ENST00000456133 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
EPCAM-204ENST00000456133 ERICH3Q5RHP9 1530 aa24.14■■□□□ 1.46
EPCAM-204ENST00000456133 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
EPCAM-204ENST00000456133 JPH4Q96JJ6 628 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms