RNA–Protein interactions for RNA: ENST00000456119.5

LINC00954-203, long intergenic non-protein coding RNA 954, humanhuman

TSL 4

Gene LINC00954, Length 522 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-203ENST00000456119 NISCHQ9Y2I1 1504 aa29.23■■■□□ 2.27
LINC00954-203ENST00000456119 ABCC9O60706 1549 aa26.26■■□□□ 1.79
LINC00954-203ENST00000456119 CCDC180Q9P1Z9 1646 aa26.17■■□□□ 1.78
LINC00954-203ENST00000456119 RB1CC1Q8TDY2 1594 aa24.93■■□□□ 1.58
LINC00954-203ENST00000456119 NACADO15069 1562 aa24.78■■□□□ 1.56
LINC00954-203ENST00000456119 DNAJC5BQ9UF47 199 aa24.76■■□□□ 1.55
LINC00954-203ENST00000456119 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
LINC00954-203ENST00000456119 MYO15BQ96JP2 1530 aa24.47■■□□□ 1.51
LINC00954-203ENST00000456119 PABPN1Q86U42 306 aaKnown RBP eCLIP24.47■■□□□ 1.51
LINC00954-203ENST00000456119 UNC13AQ9UPW8 1703 aa24.37■■□□□ 1.49
LINC00954-203ENST00000456119 BICRAQ9NZM4 1560 aa24.3■■□□□ 1.48
LINC00954-203ENST00000456119 ZCCHC6Q5VYS8 1495 aaKnown RBP24.23■■□□□ 1.47
LINC00954-203ENST00000456119 DCAF1Q9Y4B6 1507 aa24.14■■□□□ 1.45
LINC00954-203ENST00000456119 SHROOM4Q9ULL8 1493 aa23.91■■□□□ 1.42
LINC00954-203ENST00000456119 SCRIBQ14160 1630 aa23.88■■□□□ 1.41
LINC00954-203ENST00000456119 CC2D2AQ9P2K1 1620 aa23.71■■□□□ 1.39
LINC00954-203ENST00000456119 EIF4G1Q04637 1599 aaKnown RBP23.67■■□□□ 1.38
LINC00954-203ENST00000456119 CECR2Q9BXF3 1484 aa23.66■■□□□ 1.38
LINC00954-203ENST00000456119 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
LINC00954-203ENST00000456119 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
LINC00954-203ENST00000456119 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
LINC00954-203ENST00000456119 SMARCA2P51531 1590 aa22.72■■□□□ 1.23
LINC00954-203ENST00000456119 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
LINC00954-203ENST00000456119 DNAJC5Q9H3Z4 198 aa22.69■■□□□ 1.22
LINC00954-203ENST00000456119 BAZ1AQ9NRL2 1556 aaPredicted RBP22.65■■□□□ 1.22
LINC00954-203ENST00000456119 CUX2O14529 1486 aa22.63■■□□□ 1.21
LINC00954-203ENST00000456119 ERCC6Q03468 1493 aa22.62■■□□□ 1.21
LINC00954-203ENST00000456119 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
LINC00954-203ENST00000456119 NESP48681 1621 aa22.58■■□□□ 1.21
LINC00954-203ENST00000456119 BAZ1BQ9UIG0 1483 aaKnown RBP22.58■■□□□ 1.2
LINC00954-203ENST00000456119 MROH2BQ7Z745 1585 aa22.54■■□□□ 1.2
LINC00954-203ENST00000456119 LAMC3Q9Y6N6 1575 aa22.36■■□□□ 1.17
LINC00954-203ENST00000456119 THOC2Q8NI27 1593 aaKnown RBP22.33■■□□□ 1.17
LINC00954-203ENST00000456119 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
LINC00954-203ENST00000456119 WIZO95785 1651 aa22.23■■□□□ 1.15
LINC00954-203ENST00000456119 KIF21AQ7Z4S6 1674 aa22.22■■□□□ 1.15
LINC00954-203ENST00000456119 CADPSQ9ULU8 1353 aa22.22■■□□□ 1.15
LINC00954-203ENST00000456119 RSF1Q96T23 1441 aaPredicted RBP22.07■■□□□ 1.12
LINC00954-203ENST00000456119 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
LINC00954-203ENST00000456119 WDR62O43379 1518 aa22.03■■□□□ 1.12
LINC00954-203ENST00000456119 CFTRP13569 1480 aa21.96■■□□□ 1.11
LINC00954-203ENST00000456119 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
LINC00954-203ENST00000456119 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
LINC00954-203ENST00000456119 CEP164Q9UPV0 1460 aa21.95■■□□□ 1.1
LINC00954-203ENST00000456119 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
LINC00954-203ENST00000456119 CCDC88BA6NC98 1476 aa21.73■■□□□ 1.07
LINC00954-203ENST00000456119 TRIM41Q8WV44 630 aa21.63■■□□□ 1.05
LINC00954-203ENST00000456119 PRDM2Q13029 1718 aa21.62■■□□□ 1.05
LINC00954-203ENST00000456119 OSCARQ8IYS5 282 aa21.58■■□□□ 1.05
LINC00954-203ENST00000456119 ZNF608Q9ULD9 1512 aaPredicted RBP21.55■■□□□ 1.04
LINC00954-203ENST00000456119 TOPBP1Q92547 1522 aa21.54■■□□□ 1.04
LINC00954-203ENST00000456119 IFT140Q96RY7 1462 aa21.53■■□□□ 1.04
LINC00954-203ENST00000456119 ABCC8Q09428 1581 aa21.43■■□□□ 1.02
LINC00954-203ENST00000456119 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
LINC00954-203ENST00000456119 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
LINC00954-203ENST00000456119 TARBP1Q13395 1621 aaKnown RBP21.35■■□□□ 1.01
LINC00954-203ENST00000456119 AQRO60306 1485 aaKnown RBP eCLIP21.33■■□□□ 1.01
LINC00954-203ENST00000456119 POLA1P09884 1462 aaPredicted RBP21.32■■□□□ 1
LINC00954-203ENST00000456119 RIMBP3CA6NJZ7 1639 aa21.32■■□□□ 1
LINC00954-203ENST00000456119 RIMBP3BA6NNM3 1639 aa21.32■■□□□ 1
LINC00954-203ENST00000456119 RIMBP3Q9UFD9 1639 aa21.32■■□□□ 1
LINC00954-203ENST00000456119 ARHGEF11O15085 1522 aa21.26■□□□□ 0.99
LINC00954-203ENST00000456119 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
LINC00954-203ENST00000456119 SOGA1O94964 1423 aa21.21■□□□□ 0.99
LINC00954-203ENST00000456119 TDRD9Q8NDG6 1382 aaKnown RBP21.19■□□□□ 0.98
LINC00954-203ENST00000456119 CHD1O14646 1710 aa21.18■□□□□ 0.98
LINC00954-203ENST00000456119 FGD5Q6ZNL6 1462 aa21.18■□□□□ 0.98
LINC00954-203ENST00000456119 CUX1P39880 1505 aa21.17■□□□□ 0.98
LINC00954-203ENST00000456119 FBLN2P98095 1184 aa21.13■□□□□ 0.97
LINC00954-203ENST00000456119 SNAPC4Q5SXM2 1469 aa21.1■□□□□ 0.97
LINC00954-203ENST00000456119 CYB5RLQ6IPT4 315 aa21.09■□□□□ 0.97
LINC00954-203ENST00000456119 ARAP1Q96P48 1450 aa21.08■□□□□ 0.97
LINC00954-203ENST00000456119 WDR97A6NE52 1622 aa21.08■□□□□ 0.97
LINC00954-203ENST00000456119 GRIN2BQ13224 1484 aa21.02■□□□□ 0.96
LINC00954-203ENST00000456119 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
LINC00954-203ENST00000456119 CLASP1Q7Z460 1538 aa21.01■□□□□ 0.95
LINC00954-203ENST00000456119 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
LINC00954-203ENST00000456119 CHMP7Q8WUX9 453 aaPredicted RBP20.98■□□□□ 0.95
LINC00954-203ENST00000456119 SYNJ2O15056 1496 aa20.96■□□□□ 0.95
LINC00954-203ENST00000456119 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
LINC00954-203ENST00000456119 ABCA10Q8WWZ4 1543 aa20.94■□□□□ 0.94
LINC00954-203ENST00000456119 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
LINC00954-203ENST00000456119 ABCA5Q8WWZ7 1642 aa20.9■□□□□ 0.94
LINC00954-203ENST00000456119 PBRM1Q86U86 1689 aa20.89■□□□□ 0.93
LINC00954-203ENST00000456119 WRNQ14191 1432 aaPredicted RBP eCLIP20.82■□□□□ 0.92
LINC00954-203ENST00000456119 TRHP20396 242 aaPredicted RBP20.82■□□□□ 0.92
LINC00954-203ENST00000456119 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
LINC00954-203ENST00000456119 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
LINC00954-203ENST00000456119 GRIN2AQ12879 1464 aa20.76■□□□□ 0.91
LINC00954-203ENST00000456119 ADAMTS12P58397 1594 aa20.75■□□□□ 0.91
LINC00954-203ENST00000456119 NUP160Q12769 1436 aa20.72■□□□□ 0.91
LINC00954-203ENST00000456119 CEP170Q5SW79 1584 aa20.71■□□□□ 0.91
LINC00954-203ENST00000456119 ERCC6L2Q5T890 1561 aa20.71■□□□□ 0.91
LINC00954-203ENST00000456119 FHAD1B1AJZ9 1412 aa20.69■□□□□ 0.9
LINC00954-203ENST00000456119 ERICH3Q5RHP9 1530 aa20.65■□□□□ 0.9
LINC00954-203ENST00000456119 SHROOM2Q13796 1616 aa20.61■□□□□ 0.89
LINC00954-203ENST00000456119 PRG4Q92954 1404 aaPredicted RBP20.49■□□□□ 0.87
LINC00954-203ENST00000456119 JPH4Q96JJ6 628 aa20.48■□□□□ 0.87
LINC00954-203ENST00000456119 RUSC2Q8N2Y8 1516 aa20.46■□□□□ 0.87
LINC00954-203ENST00000456119 IGF1RP08069 1367 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms