RNA–Protein interactions for RNA: ENST00000456079.1

PLOD3-207, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-207ENST00000456079 NISCHQ9Y2I1 1504 aa36.34■■■■□ 3.41
PLOD3-207ENST00000456079 CCDC180Q9P1Z9 1646 aa32.16■■■□□ 2.74
PLOD3-207ENST00000456079 ABCC9O60706 1549 aa31.63■■■□□ 2.65
PLOD3-207ENST00000456079 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
PLOD3-207ENST00000456079 RB1CC1Q8TDY2 1594 aa30.28■■■□□ 2.44
PLOD3-207ENST00000456079 ZCCHC6Q5VYS8 1495 aaKnown RBP30.27■■■□□ 2.44
PLOD3-207ENST00000456079 NACADO15069 1562 aa30.27■■■□□ 2.44
PLOD3-207ENST00000456079 MYO15BQ96JP2 1530 aa30.09■■■□□ 2.41
PLOD3-207ENST00000456079 DCAF1Q9Y4B6 1507 aa29.99■■■□□ 2.39
PLOD3-207ENST00000456079 UNC13AQ9UPW8 1703 aa29.68■■■□□ 2.34
PLOD3-207ENST00000456079 PABPN1Q86U42 306 aaKnown RBP eCLIP29.64■■■□□ 2.34
PLOD3-207ENST00000456079 BICRAQ9NZM4 1560 aa29.54■■■□□ 2.32
PLOD3-207ENST00000456079 SCRIBQ14160 1630 aa29.48■■■□□ 2.31
PLOD3-207ENST00000456079 DNAJC5BQ9UF47 199 aa29.2■■■□□ 2.26
PLOD3-207ENST00000456079 SHROOM4Q9ULL8 1493 aa29■■■□□ 2.23
PLOD3-207ENST00000456079 EIF4G1Q04637 1599 aaKnown RBP28.68■■■□□ 2.18
PLOD3-207ENST00000456079 CC2D2AQ9P2K1 1620 aa28.57■■■□□ 2.16
PLOD3-207ENST00000456079 CECR2Q9BXF3 1484 aa28.42■■■□□ 2.14
PLOD3-207ENST00000456079 SMARCA4P51532 1647 aa28.17■■■□□ 2.1
PLOD3-207ENST00000456079 BAZ1AQ9NRL2 1556 aaPredicted RBP28.08■■■□□ 2.09
PLOD3-207ENST00000456079 MROH2BQ7Z745 1585 aa28.07■■■□□ 2.08
PLOD3-207ENST00000456079 ATAD2BQ9ULI0 1458 aa28.05■■■□□ 2.08
PLOD3-207ENST00000456079 NCAPD3P42695 1498 aa28.01■■■□□ 2.07
PLOD3-207ENST00000456079 SMARCA2P51531 1590 aa27.9■■■□□ 2.06
PLOD3-207ENST00000456079 PEG3Q9GZU2 1588 aa27.88■■■□□ 2.05
PLOD3-207ENST00000456079 HMGXB3Q12766 1538 aa27.81■■■□□ 2.04
PLOD3-207ENST00000456079 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
PLOD3-207ENST00000456079 BAZ1BQ9UIG0 1483 aaKnown RBP27.75■■■□□ 2.03
PLOD3-207ENST00000456079 WIZO95785 1651 aa27.74■■■□□ 2.03
PLOD3-207ENST00000456079 NESP48681 1621 aa27.44■■□□□ 1.98
PLOD3-207ENST00000456079 TOP2AP11388 1531 aaKnown RBP27.38■■□□□ 1.97
PLOD3-207ENST00000456079 CADPSQ9ULU8 1353 aa27.2■■□□□ 1.94
PLOD3-207ENST00000456079 LAMC3Q9Y6N6 1575 aa27.18■■□□□ 1.94
PLOD3-207ENST00000456079 CCDC88BA6NC98 1476 aa27.14■■□□□ 1.94
PLOD3-207ENST00000456079 ERCC6Q03468 1493 aa27.14■■□□□ 1.94
PLOD3-207ENST00000456079 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
PLOD3-207ENST00000456079 CFTRP13569 1480 aa27.05■■□□□ 1.92
PLOD3-207ENST00000456079 PDS5BQ9NTI5 1447 aa27■■□□□ 1.91
PLOD3-207ENST00000456079 KIF21AQ7Z4S6 1674 aa26.99■■□□□ 1.91
PLOD3-207ENST00000456079 THOC2Q8NI27 1593 aaKnown RBP26.92■■□□□ 1.9
PLOD3-207ENST00000456079 FANCD2Q9BXW9 1451 aa26.87■■□□□ 1.89
PLOD3-207ENST00000456079 CUX2O14529 1486 aa26.84■■□□□ 1.89
PLOD3-207ENST00000456079 CEP164Q9UPV0 1460 aa26.79■■□□□ 1.88
PLOD3-207ENST00000456079 MRC2Q9UBG0 1479 aa26.77■■□□□ 1.88
PLOD3-207ENST00000456079 WDR62O43379 1518 aa26.7■■□□□ 1.86
PLOD3-207ENST00000456079 PRDM2Q13029 1718 aa26.68■■□□□ 1.86
PLOD3-207ENST00000456079 URB2Q14146 1524 aaKnown RBP26.67■■□□□ 1.86
PLOD3-207ENST00000456079 TOPBP1Q92547 1522 aa26.46■■□□□ 1.83
PLOD3-207ENST00000456079 DNMBPQ6XZF7 1577 aa26.38■■□□□ 1.81
PLOD3-207ENST00000456079 CUX1P39880 1505 aa26.32■■□□□ 1.8
PLOD3-207ENST00000456079 ABCC8Q09428 1581 aa26.32■■□□□ 1.8
PLOD3-207ENST00000456079 ZNF608Q9ULD9 1512 aaPredicted RBP26.25■■□□□ 1.79
PLOD3-207ENST00000456079 POLA1P09884 1462 aaPredicted RBP26.25■■□□□ 1.79
PLOD3-207ENST00000456079 IFT140Q96RY7 1462 aa26.23■■□□□ 1.79
PLOD3-207ENST00000456079 RAD54L2Q9Y4B4 1467 aa26.2■■□□□ 1.78
PLOD3-207ENST00000456079 TARBP1Q13395 1621 aaKnown RBP26.19■■□□□ 1.78
PLOD3-207ENST00000456079 FGD5Q6ZNL6 1462 aa26.18■■□□□ 1.78
PLOD3-207ENST00000456079 SOGA1O94964 1423 aa26.13■■□□□ 1.77
PLOD3-207ENST00000456079 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
PLOD3-207ENST00000456079 AQRO60306 1485 aaKnown RBP eCLIP26.1■■□□□ 1.778e-6■■■■□ 23.2
PLOD3-207ENST00000456079 SYNJ1O43426 1573 aa26.09■■□□□ 1.77
PLOD3-207ENST00000456079 WRNQ14191 1432 aaPredicted RBP eCLIP26.08■■□□□ 1.77
PLOD3-207ENST00000456079 EIF4G3O43432 1585 aaKnown RBP26.04■■□□□ 1.76
PLOD3-207ENST00000456079 TDRD9Q8NDG6 1382 aaKnown RBP26.04■■□□□ 1.76
PLOD3-207ENST00000456079 TOP2BQ02880 1626 aa26.02■■□□□ 1.76
PLOD3-207ENST00000456079 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
PLOD3-207ENST00000456079 WDR97A6NE52 1622 aa25.93■■□□□ 1.74
PLOD3-207ENST00000456079 ABCA10Q8WWZ4 1543 aa25.9■■□□□ 1.74
PLOD3-207ENST00000456079 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
PLOD3-207ENST00000456079 GAPVD1Q14C86 1478 aa25.8■■□□□ 1.72
PLOD3-207ENST00000456079 SNAPC4Q5SXM2 1469 aa25.79■■□□□ 1.72
PLOD3-207ENST00000456079 OSCARQ8IYS5 282 aa25.78■■□□□ 1.72
PLOD3-207ENST00000456079 GRIN2BQ13224 1484 aa25.78■■□□□ 1.72
PLOD3-207ENST00000456079 FBLN2P98095 1184 aa25.7■■□□□ 1.7
PLOD3-207ENST00000456079 PBRM1Q86U86 1689 aa25.7■■□□□ 1.7
PLOD3-207ENST00000456079 CHD1O14646 1710 aa25.69■■□□□ 1.7
PLOD3-207ENST00000456079 MAGI1Q96QZ7 1491 aaPredicted RBP25.68■■□□□ 1.7
PLOD3-207ENST00000456079 SYNJ2O15056 1496 aa25.61■■□□□ 1.69
PLOD3-207ENST00000456079 CHMP7Q8WUX9 453 aaPredicted RBP25.6■■□□□ 1.69
PLOD3-207ENST00000456079 ERICH3Q5RHP9 1530 aa25.55■■□□□ 1.68
PLOD3-207ENST00000456079 ADAMTS12P58397 1594 aa25.55■■□□□ 1.68
PLOD3-207ENST00000456079 IGF1RP08069 1367 aa25.52■■□□□ 1.68
PLOD3-207ENST00000456079 FHAD1B1AJZ9 1412 aa25.49■■□□□ 1.67
PLOD3-207ENST00000456079 KIF27Q86VH2 1401 aa25.49■■□□□ 1.67
PLOD3-207ENST00000456079 RUSC2Q8N2Y8 1516 aa25.47■■□□□ 1.67
PLOD3-207ENST00000456079 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
PLOD3-207ENST00000456079 TRIM41Q8WV44 630 aa25.47■■□□□ 1.67
PLOD3-207ENST00000456079 CLASP1Q7Z460 1538 aa25.47■■□□□ 1.67
PLOD3-207ENST00000456079 RIMBP3CA6NJZ7 1639 aa25.4■■□□□ 1.66
PLOD3-207ENST00000456079 RIMBP3BA6NNM3 1639 aa25.4■■□□□ 1.66
PLOD3-207ENST00000456079 RIMBP3Q9UFD9 1639 aa25.4■■□□□ 1.66
PLOD3-207ENST00000456079 CEP170Q5SW79 1584 aa25.39■■□□□ 1.66
PLOD3-207ENST00000456079 ARHGEF11O15085 1522 aa25.39■■□□□ 1.66
PLOD3-207ENST00000456079 NUP160Q12769 1436 aa25.38■■□□□ 1.65
PLOD3-207ENST00000456079 CARMIL1Q5VZK9 1371 aa25.3■■□□□ 1.64
PLOD3-207ENST00000456079 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
PLOD3-207ENST00000456079 CUL7Q14999 1698 aa25.27■■□□□ 1.64
PLOD3-207ENST00000456079 ARAP1Q96P48 1450 aa25.23■■□□□ 1.63
PLOD3-207ENST00000456079 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
PLOD3-207ENST00000456079 CYB5RLQ6IPT4 315 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms