RNA–Protein interactions for RNA: ENST00000456027.1

HERC2P3-213, Transcript of hect domain and RLD 2 pseudogene 3, humanhuman

TSL 2

Gene HERC2P3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3-213ENST00000456027 NISCHQ9Y2I1 1504 aa20.41■□□□□ 0.86
HERC2P3-213ENST00000456027 CCDC180Q9P1Z9 1646 aa17.9■□□□□ 0.46
HERC2P3-213ENST00000456027 ZCCHC6Q5VYS8 1495 aaKnown RBP17.25■□□□□ 0.35
HERC2P3-213ENST00000456027 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
HERC2P3-213ENST00000456027 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.28
HERC2P3-213ENST00000456027 ABCC9O60706 1549 aa16.54■□□□□ 0.24
HERC2P3-213ENST00000456027 NACADO15069 1562 aa16.53■□□□□ 0.24
HERC2P3-213ENST00000456027 SHROOM4Q9ULL8 1493 aa16.44■□□□□ 0.22
HERC2P3-213ENST00000456027 RB1CC1Q8TDY2 1594 aa16.34■□□□□ 0.21
HERC2P3-213ENST00000456027 DCAF8L2P0C7V8 631 aa16.32■□□□□ 0.2
HERC2P3-213ENST00000456027 SCRIBQ14160 1630 aa16.3■□□□□ 0.2
HERC2P3-213ENST00000456027 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.17
HERC2P3-213ENST00000456027 BICRAQ9NZM4 1560 aa15.9■□□□□ 0.14
HERC2P3-213ENST00000456027 RSF1Q96T23 1441 aaPredicted RBP15.82■□□□□ 0.12
HERC2P3-213ENST00000456027 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
HERC2P3-213ENST00000456027 SUPT5HO00267 1087 aaKnown RBP15.77■□□□□ 0.12
HERC2P3-213ENST00000456027 BAZ1AQ9NRL2 1556 aaPredicted RBP15.76■□□□□ 0.11
HERC2P3-213ENST00000456027 MROH2BQ7Z745 1585 aa15.74■□□□□ 0.11
HERC2P3-213ENST00000456027 SMARCA4P51532 1647 aa15.71■□□□□ 0.11
HERC2P3-213ENST00000456027 WIZO95785 1651 aa15.61■□□□□ 0.09
HERC2P3-213ENST00000456027 PEG3Q9GZU2 1588 aa15.59■□□□□ 0.09
HERC2P3-213ENST00000456027 TOP2AP11388 1531 aaKnown RBP15.54■□□□□ 0.08
HERC2P3-213ENST00000456027 EIF4G1Q04637 1599 aaKnown RBP15.47■□□□□ 0.07
HERC2P3-213ENST00000456027 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
HERC2P3-213ENST00000456027 SMARCA2P51531 1590 aa15.39■□□□□ 0.05
HERC2P3-213ENST00000456027 ATAD2BQ9ULI0 1458 aa15.36■□□□□ 0.05
HERC2P3-213ENST00000456027 HMGXB3Q12766 1538 aa15.31■□□□□ 0.04
HERC2P3-213ENST00000456027 CHIC1Q5VXU3 224 aa15.29■□□□□ 0.04
HERC2P3-213ENST00000456027 CCDC88BA6NC98 1476 aa15.26■□□□□ 0.03
HERC2P3-213ENST00000456027 BAZ1BQ9UIG0 1483 aaKnown RBP15.25■□□□□ 0.03
HERC2P3-213ENST00000456027 NCAPD3P42695 1498 aa15.21■□□□□ 0.03
HERC2P3-213ENST00000456027 CC2D2AQ9P2K1 1620 aa15.08■□□□□ 0
HERC2P3-213ENST00000456027 PRDM2Q13029 1718 aa14.99□□□□□ -0.01
HERC2P3-213ENST00000456027 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
HERC2P3-213ENST00000456027 CFTRP13569 1480 aa14.91□□□□□ -0.02
HERC2P3-213ENST00000456027 SYNJ1O43426 1573 aa14.9□□□□□ -0.02
HERC2P3-213ENST00000456027 TRIM41Q8WV44 630 aa14.88□□□□□ -0.03
HERC2P3-213ENST00000456027 BIVM-ERCC5R4GMW8 1640 aa14.88□□□□□ -0.03
HERC2P3-213ENST00000456027 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
HERC2P3-213ENST00000456027 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
HERC2P3-213ENST00000456027 EEA1Q15075 1411 aa14.75□□□□□ -0.05
HERC2P3-213ENST00000456027 CADPSQ9ULU8 1353 aa14.75□□□□□ -0.05
HERC2P3-213ENST00000456027 CUX1P39880 1505 aa14.74□□□□□ -0.05
HERC2P3-213ENST00000456027 LAMC3Q9Y6N6 1575 aa14.72□□□□□ -0.05
HERC2P3-213ENST00000456027 SOGA1O94964 1423 aa14.66□□□□□ -0.06
HERC2P3-213ENST00000456027 KIF21BO75037 1637 aa14.65□□□□□ -0.06
HERC2P3-213ENST00000456027 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
HERC2P3-213ENST00000456027 DNMBPQ6XZF7 1577 aa14.61□□□□□ -0.07
HERC2P3-213ENST00000456027 RUSC2Q8N2Y8 1516 aa14.61□□□□□ -0.07
HERC2P3-213ENST00000456027 NESP48681 1621 aa14.59□□□□□ -0.07
HERC2P3-213ENST00000456027 LOC105371045A0A1W2PR82 267 aa14.57□□□□□ -0.08
HERC2P3-213ENST00000456027 GOLGA3Q08378 1498 aa14.55□□□□□ -0.08
HERC2P3-213ENST00000456027 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
HERC2P3-213ENST00000456027 KIF21AQ7Z4S6 1674 aa14.53□□□□□ -0.08
HERC2P3-213ENST00000456027 WDR97A6NE52 1622 aa14.52□□□□□ -0.08
HERC2P3-213ENST00000456027 ERICH3Q5RHP9 1530 aa14.52□□□□□ -0.08
HERC2P3-213ENST00000456027 FGD5Q6ZNL6 1462 aa14.52□□□□□ -0.08
HERC2P3-213ENST00000456027 TOPBP1Q92547 1522 aa14.51□□□□□ -0.09
HERC2P3-213ENST00000456027 FAM9AQ8IZU1 332 aaPredicted RBP14.51□□□□□ -0.09
HERC2P3-213ENST00000456027 URB2Q14146 1524 aaKnown RBP14.48□□□□□ -0.09
HERC2P3-213ENST00000456027 PRXQ9BXM0 1461 aa14.48□□□□□ -0.09
HERC2P3-213ENST00000456027 PDS5BQ9NTI5 1447 aa14.48□□□□□ -0.09
HERC2P3-213ENST00000456027 TNIKQ9UKE5 1360 aa14.47□□□□□ -0.09
HERC2P3-213ENST00000456027 POLA1P09884 1462 aaPredicted RBP14.46□□□□□ -0.09
HERC2P3-213ENST00000456027 DNAJC5BQ9UF47 199 aa14.46□□□□□ -0.09
HERC2P3-213ENST00000456027 KIF27Q86VH2 1401 aa14.46□□□□□ -0.09
HERC2P3-213ENST00000456027 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
HERC2P3-213ENST00000456027 ABCA10Q8WWZ4 1543 aa14.45□□□□□ -0.1
HERC2P3-213ENST00000456027 CEP162Q5TB80 1403 aa14.41□□□□□ -0.1
HERC2P3-213ENST00000456027 RAPGEF2Q9Y4G8 1499 aa14.41□□□□□ -0.1
HERC2P3-213ENST00000456027 ABCA5Q8WWZ7 1642 aa14.41□□□□□ -0.1
HERC2P3-213ENST00000456027 CUX2O14529 1486 aa14.39□□□□□ -0.11
HERC2P3-213ENST00000456027 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
HERC2P3-213ENST00000456027 WDR62O43379 1518 aa14.37□□□□□ -0.11
HERC2P3-213ENST00000456027 TARBP1Q13395 1621 aaKnown RBP14.36□□□□□ -0.11
HERC2P3-213ENST00000456027 CUL7Q14999 1698 aa14.35□□□□□ -0.11
HERC2P3-213ENST00000456027 THOC2Q8NI27 1593 aaKnown RBP14.34□□□□□ -0.11
HERC2P3-213ENST00000456027 RAD54L2Q9Y4B4 1467 aa14.32□□□□□ -0.12
HERC2P3-213ENST00000456027 IGF1RP08069 1367 aa14.28□□□□□ -0.12
HERC2P3-213ENST00000456027 CLIP1P30622 1438 aa14.24□□□□□ -0.13
HERC2P3-213ENST00000456027 PBRM1Q86U86 1689 aa14.24□□□□□ -0.13
HERC2P3-213ENST00000456027 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.13
HERC2P3-213ENST00000456027 CTTNBP2Q8WZ74 1663 aa14.2□□□□□ -0.14
HERC2P3-213ENST00000456027 IFT140Q96RY7 1462 aa14.2□□□□□ -0.14
HERC2P3-213ENST00000456027 ADAMTS12P58397 1594 aa14.2□□□□□ -0.14
HERC2P3-213ENST00000456027 GAPVD1Q14C86 1478 aa14.19□□□□□ -0.14
HERC2P3-213ENST00000456027 ARAP1Q96P48 1450 aa14.19□□□□□ -0.14
HERC2P3-213ENST00000456027 VPS8Q8N3P4 1428 aa14.19□□□□□ -0.14
HERC2P3-213ENST00000456027 CARMIL1Q5VZK9 1371 aa14.19□□□□□ -0.14
HERC2P3-213ENST00000456027 UBTFP17480 764 aaKnown RBP14.17□□□□□ -0.14
HERC2P3-213ENST00000456027 EIF4G3O43432 1585 aaKnown RBP14.15□□□□□ -0.14
HERC2P3-213ENST00000456027 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
HERC2P3-213ENST00000456027 ARHGAP35Q9NRY4 1499 aa14.14□□□□□ -0.15
HERC2P3-213ENST00000456027 EFCAB5A4FU69 1503 aa14.13□□□□□ -0.15
HERC2P3-213ENST00000456027 GRIN2BQ13224 1484 aa14.1□□□□□ -0.15
HERC2P3-213ENST00000456027 TDRD9Q8NDG6 1382 aaKnown RBP14.09□□□□□ -0.15
HERC2P3-213ENST00000456027 SAMD9Q5K651 1589 aa14.09□□□□□ -0.15
HERC2P3-213ENST00000456027 ZNF608Q9ULD9 1512 aaPredicted RBP14.07□□□□□ -0.16
HERC2P3-213ENST00000456027 FHAD1B1AJZ9 1412 aa14.07□□□□□ -0.16
HERC2P3-213ENST00000456027 TRIM26Q12899 539 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms