RNA–Protein interactions for RNA: ENST00000455987.5

SYCP1-203, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best)

Gene SYCP1, Length 2,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-203ENST00000455987 NISCHQ9Y2I1 1504 aa15.13■□□□□ 0.01
SYCP1-203ENST00000455987 ABCC9O60706 1549 aa13.88□□□□□ -0.19
SYCP1-203ENST00000455987 CCDC180Q9P1Z9 1646 aa13.72□□□□□ -0.21
SYCP1-203ENST00000455987 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
SYCP1-203ENST00000455987 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
SYCP1-203ENST00000455987 NACADO15069 1562 aa13.01□□□□□ -0.33
SYCP1-203ENST00000455987 UNC13AQ9UPW8 1703 aa12.87□□□□□ -0.35
SYCP1-203ENST00000455987 PABPN1Q86U42 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
SYCP1-203ENST00000455987 DCAF8L2P0C7V8 631 aa12.79□□□□□ -0.36
SYCP1-203ENST00000455987 BICRAQ9NZM4 1560 aa12.77□□□□□ -0.36
SYCP1-203ENST00000455987 MYO15BQ96JP2 1530 aa12.77□□□□□ -0.36
SYCP1-203ENST00000455987 SHROOM4Q9ULL8 1493 aa12.61□□□□□ -0.39
SYCP1-203ENST00000455987 CC2D2AQ9P2K1 1620 aa12.56□□□□□ -0.4
SYCP1-203ENST00000455987 CECR2Q9BXF3 1484 aa12.54□□□□□ -0.4
SYCP1-203ENST00000455987 DCAF1Q9Y4B6 1507 aa12.51□□□□□ -0.41
SYCP1-203ENST00000455987 ZCCHC6Q5VYS8 1495 aaKnown RBP12.49□□□□□ -0.41
SYCP1-203ENST00000455987 EIF4G1Q04637 1599 aaKnown RBP12.47□□□□□ -0.41
SYCP1-203ENST00000455987 SCRIBQ14160 1630 aa12.43□□□□□ -0.42
SYCP1-203ENST00000455987 DNAJC5Q9H3Z4 198 aa12.34□□□□□ -0.43
SYCP1-203ENST00000455987 CUX2O14529 1486 aa12.1□□□□□ -0.47
SYCP1-203ENST00000455987 ERCC6Q03468 1493 aa12.01□□□□□ -0.49
SYCP1-203ENST00000455987 NCAPD3P42695 1498 aa12□□□□□ -0.49
SYCP1-203ENST00000455987 ATAD2BQ9ULI0 1458 aa11.92□□□□□ -0.5
SYCP1-203ENST00000455987 HMGXB3Q12766 1538 aa11.9□□□□□ -0.5
SYCP1-203ENST00000455987 SMARCA2P51531 1590 aa11.89□□□□□ -0.51
SYCP1-203ENST00000455987 NESP48681 1621 aa11.86□□□□□ -0.51
SYCP1-203ENST00000455987 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
SYCP1-203ENST00000455987 THOC2Q8NI27 1593 aaKnown RBP11.82□□□□□ -0.52
SYCP1-203ENST00000455987 BAZ1BQ9UIG0 1483 aaKnown RBP11.79□□□□□ -0.52
SYCP1-203ENST00000455987 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
SYCP1-203ENST00000455987 BAZ1AQ9NRL2 1556 aaPredicted RBP11.77□□□□□ -0.53
SYCP1-203ENST00000455987 PEG3Q9GZU2 1588 aa11.76□□□□□ -0.53
SYCP1-203ENST00000455987 KIF21AQ7Z4S6 1674 aa11.73□□□□□ -0.53
SYCP1-203ENST00000455987 PDS5BQ9NTI5 1447 aa11.7□□□□□ -0.54
SYCP1-203ENST00000455987 TRIM41Q8WV44 630 aa11.66□□□□□ -0.54
SYCP1-203ENST00000455987 MROH2BQ7Z745 1585 aa11.64□□□□□ -0.55
SYCP1-203ENST00000455987 MRC2Q9UBG0 1479 aa11.61□□□□□ -0.55
SYCP1-203ENST00000455987 CADPSQ9ULU8 1353 aa11.61□□□□□ -0.55
SYCP1-203ENST00000455987 WDR62O43379 1518 aa11.61□□□□□ -0.55
SYCP1-203ENST00000455987 CEP164Q9UPV0 1460 aa11.52□□□□□ -0.57
SYCP1-203ENST00000455987 WIZO95785 1651 aa11.49□□□□□ -0.57
SYCP1-203ENST00000455987 FANCD2Q9BXW9 1451 aa11.48□□□□□ -0.57
SYCP1-203ENST00000455987 OSCARQ8IYS5 282 aa11.47□□□□□ -0.57
SYCP1-203ENST00000455987 CFTRP13569 1480 aa11.44□□□□□ -0.58
SYCP1-203ENST00000455987 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.58
SYCP1-203ENST00000455987 RIMBP3CA6NJZ7 1639 aa11.37□□□□□ -0.59
SYCP1-203ENST00000455987 RIMBP3BA6NNM3 1639 aa11.37□□□□□ -0.59
SYCP1-203ENST00000455987 RIMBP3Q9UFD9 1639 aa11.37□□□□□ -0.59
SYCP1-203ENST00000455987 TOP2AP11388 1531 aaKnown RBP11.34□□□□□ -0.59
SYCP1-203ENST00000455987 PRDM2Q13029 1718 aa11.34□□□□□ -0.59
SYCP1-203ENST00000455987 RSF1Q96T23 1441 aaPredicted RBP11.31□□□□□ -0.6
SYCP1-203ENST00000455987 ARHGEF11O15085 1522 aa11.31□□□□□ -0.6
SYCP1-203ENST00000455987 IFT140Q96RY7 1462 aa11.3□□□□□ -0.6
SYCP1-203ENST00000455987 ZNF608Q9ULD9 1512 aaPredicted RBP11.29□□□□□ -0.6
SYCP1-203ENST00000455987 TOPBP1Q92547 1522 aa11.24□□□□□ -0.61
SYCP1-203ENST00000455987 EIF4G3O43432 1585 aaKnown RBP11.24□□□□□ -0.61
SYCP1-203ENST00000455987 ABCC8Q09428 1581 aa11.22□□□□□ -0.61
SYCP1-203ENST00000455987 CHD1O14646 1710 aa11.21□□□□□ -0.62
SYCP1-203ENST00000455987 CCDC88BA6NC98 1476 aa11.2□□□□□ -0.62
SYCP1-203ENST00000455987 CYB5RLQ6IPT4 315 aa11.2□□□□□ -0.62
SYCP1-203ENST00000455987 DNMBPQ6XZF7 1577 aa11.19□□□□□ -0.62
SYCP1-203ENST00000455987 ARAP1Q96P48 1450 aa11.18□□□□□ -0.62
SYCP1-203ENST00000455987 TARBP1Q13395 1621 aaKnown RBP11.17□□□□□ -0.62
SYCP1-203ENST00000455987 AQRO60306 1485 aaKnown RBP eCLIP11.15□□□□□ -0.62
SYCP1-203ENST00000455987 TRHP20396 242 aaPredicted RBP11.15□□□□□ -0.63
SYCP1-203ENST00000455987 POLA1P09884 1462 aaPredicted RBP11.11□□□□□ -0.63
SYCP1-203ENST00000455987 FBLN2P98095 1184 aa11.1□□□□□ -0.63
SYCP1-203ENST00000455987 CLASP1Q7Z460 1538 aa11.07□□□□□ -0.64
SYCP1-203ENST00000455987 WDR97A6NE52 1622 aa11.06□□□□□ -0.64
SYCP1-203ENST00000455987 RAD54L2Q9Y4B4 1467 aa11.05□□□□□ -0.64
SYCP1-203ENST00000455987 SYNJ1O43426 1573 aa11.04□□□□□ -0.64
SYCP1-203ENST00000455987 SNAPC4Q5SXM2 1469 aa11.04□□□□□ -0.64
SYCP1-203ENST00000455987 TDRD9Q8NDG6 1382 aaKnown RBP11.04□□□□□ -0.64
SYCP1-203ENST00000455987 SOGA1O94964 1423 aa11.04□□□□□ -0.64
SYCP1-203ENST00000455987 MAGI1Q96QZ7 1491 aaPredicted RBP11.02□□□□□ -0.65
SYCP1-203ENST00000455987 FGD5Q6ZNL6 1462 aa11□□□□□ -0.65
SYCP1-203ENST00000455987 AEBP2Q6ZN18 517 aaPredicted RBP11□□□□□ -0.65
SYCP1-203ENST00000455987 CHMP7Q8WUX9 453 aaPredicted RBP10.99□□□□□ -0.65
SYCP1-203ENST00000455987 GRIN2BQ13224 1484 aa10.99□□□□□ -0.65
SYCP1-203ENST00000455987 SYNJ2O15056 1496 aa10.98□□□□□ -0.65
SYCP1-203ENST00000455987 CUX1P39880 1505 aa10.95□□□□□ -0.66
SYCP1-203ENST00000455987 GAPVD1Q14C86 1478 aa10.95□□□□□ -0.66
SYCP1-203ENST00000455987 PBRM1Q86U86 1689 aa10.94□□□□□ -0.66
SYCP1-203ENST00000455987 ABCA5Q8WWZ7 1642 aa10.89□□□□□ -0.67
SYCP1-203ENST00000455987 ABCA10Q8WWZ4 1543 aa10.88□□□□□ -0.67
SYCP1-203ENST00000455987 ERCC6L2Q5T890 1561 aa10.85□□□□□ -0.67
SYCP1-203ENST00000455987 GRIN2AQ12879 1464 aa10.85□□□□□ -0.67
SYCP1-203ENST00000455987 CEP170Q5SW79 1584 aa10.83□□□□□ -0.68
SYCP1-203ENST00000455987 NUP160Q12769 1436 aa10.83□□□□□ -0.68
SYCP1-203ENST00000455987 SHROOM2Q13796 1616 aa10.82□□□□□ -0.68
SYCP1-203ENST00000455987 ADAMTS12P58397 1594 aa10.82□□□□□ -0.68
SYCP1-203ENST00000455987 KIF13AQ9H1H9 1805 aa10.81□□□□□ -0.68
SYCP1-203ENST00000455987 FHAD1B1AJZ9 1412 aa10.77□□□□□ -0.69
SYCP1-203ENST00000455987 WRNQ14191 1432 aaPredicted RBP eCLIP10.77□□□□□ -0.69
SYCP1-203ENST00000455987 BIVM-ERCC5R4GMW8 1640 aa10.74□□□□□ -0.69
SYCP1-203ENST00000455987 ERICH3Q5RHP9 1530 aa10.74□□□□□ -0.69
SYCP1-203ENST00000455987 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
SYCP1-203ENST00000455987 PRG4Q92954 1404 aaPredicted RBP10.72□□□□□ -0.69
SYCP1-203ENST00000455987 ABCC10Q5T3U5 1492 aa10.7□□□□□ -0.7
SYCP1-203ENST00000455987 MAPKBP1O60336 1514 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms