RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 NISCHQ9Y2I1 1504 aa47.15■■■■■ 5.14
COL20A1-204ENST00000455906 CCDC180Q9P1Z9 1646 aa42.32■■■■■ 4.37
COL20A1-204ENST00000455906 ABCC9O60706 1549 aa42.27■■■■■ 4.36
COL20A1-204ENST00000455906 RB1CC1Q8TDY2 1594 aa40.25■■■■■ 4.03
COL20A1-204ENST00000455906 NACADO15069 1562 aa39.99■■■■□ 3.99
COL20A1-204ENST00000455906 DCAF8L2P0C7V8 631 aa39.69■■■■□ 3.94
COL20A1-204ENST00000455906 DNAJC5BQ9UF47 199 aa39.67■■■■□ 3.94
COL20A1-204ENST00000455906 MYO15BQ96JP2 1530 aa39.46■■■■□ 3.91
COL20A1-204ENST00000455906 UNC13AQ9UPW8 1703 aa39.41■■■■□ 3.9
COL20A1-204ENST00000455906 PABPN1Q86U42 306 aaKnown RBP eCLIP39.34■■■■□ 3.89
COL20A1-204ENST00000455906 BICRAQ9NZM4 1560 aa39.13■■■■□ 3.85
COL20A1-204ENST00000455906 ZCCHC6Q5VYS8 1495 aaKnown RBP39.1■■■■□ 3.85
COL20A1-204ENST00000455906 DCAF1Q9Y4B6 1507 aa38.97■■■■□ 3.83
COL20A1-204ENST00000455906 SHROOM4Q9ULL8 1493 aa38.57■■■■□ 3.76
COL20A1-204ENST00000455906 SCRIBQ14160 1630 aa38.54■■■■□ 3.76
COL20A1-204ENST00000455906 CC2D2AQ9P2K1 1620 aa38.21■■■■□ 3.71
COL20A1-204ENST00000455906 EIF4G1Q04637 1599 aaKnown RBP38.14■■■■□ 3.7
COL20A1-204ENST00000455906 CECR2Q9BXF3 1484 aa38.08■■■■□ 3.69
COL20A1-204ENST00000455906 NCAPD3P42695 1498 aa36.92■■■■□ 3.5
COL20A1-204ENST00000455906 ATAD2BQ9ULI0 1458 aa36.82■■■■□ 3.48
COL20A1-204ENST00000455906 SMARCA4P51532 1647 aa36.79■■■■□ 3.48
COL20A1-204ENST00000455906 SMARCA2P51531 1590 aa36.7■■■■□ 3.46
COL20A1-204ENST00000455906 HMGXB3Q12766 1538 aa36.65■■■■□ 3.46
COL20A1-204ENST00000455906 BAZ1AQ9NRL2 1556 aaPredicted RBP36.59■■■■□ 3.45
COL20A1-204ENST00000455906 ERCC6Q03468 1493 aa36.46■■■■□ 3.43
COL20A1-204ENST00000455906 PEG3Q9GZU2 1588 aa36.45■■■■□ 3.43
COL20A1-204ENST00000455906 CUX2O14529 1486 aa36.43■■■■□ 3.42
COL20A1-204ENST00000455906 BAZ1BQ9UIG0 1483 aaKnown RBP36.43■■■■□ 3.42
COL20A1-204ENST00000455906 DNAJC5Q9H3Z4 198 aa36.38■■■■□ 3.41
COL20A1-204ENST00000455906 NESP48681 1621 aa36.34■■■■□ 3.41
COL20A1-204ENST00000455906 MROH2BQ7Z745 1585 aa36.34■■■■□ 3.41
COL20A1-204ENST00000455906 LAMC3Q9Y6N6 1575 aa36.08■■■■□ 3.37
COL20A1-204ENST00000455906 THOC2Q8NI27 1593 aaKnown RBP36■■■■□ 3.35
COL20A1-204ENST00000455906 WIZO95785 1651 aa35.91■■■■□ 3.34
COL20A1-204ENST00000455906 KIF21AQ7Z4S6 1674 aa35.89■■■■□ 3.34
COL20A1-204ENST00000455906 PDS5BQ9NTI5 1447 aa35.84■■■■□ 3.33
COL20A1-204ENST00000455906 CADPSQ9ULU8 1353 aa35.78■■■■□ 3.32
COL20A1-204ENST00000455906 RSF1Q96T23 1441 aaPredicted RBP35.58■■■■□ 3.29
COL20A1-204ENST00000455906 MRC2Q9UBG0 1479 aa35.55■■■■□ 3.28
COL20A1-204ENST00000455906 WDR62O43379 1518 aa35.49■■■■□ 3.27
COL20A1-204ENST00000455906 TOP2AP11388 1531 aaKnown RBP35.45■■■■□ 3.27
COL20A1-204ENST00000455906 CEP164Q9UPV0 1460 aa35.41■■■■□ 3.26
COL20A1-204ENST00000455906 CFTRP13569 1480 aa35.4■■■■□ 3.26
COL20A1-204ENST00000455906 FANCD2Q9BXW9 1451 aa35.38■■■■□ 3.25
COL20A1-204ENST00000455906 URB2Q14146 1524 aaKnown RBP35.11■■■■□ 3.21
COL20A1-204ENST00000455906 PRDM2Q13029 1718 aa35.07■■■■□ 3.2
COL20A1-204ENST00000455906 CCDC88BA6NC98 1476 aa35.04■■■■□ 3.2
COL20A1-204ENST00000455906 TRIM41Q8WV44 630 aa34.75■■■■□ 3.15
COL20A1-204ENST00000455906 OSCARQ8IYS5 282 aa34.73■■■■□ 3.15
COL20A1-204ENST00000455906 TOPBP1Q92547 1522 aa34.72■■■■□ 3.15
COL20A1-204ENST00000455906 IFT140Q96RY7 1462 aa34.7■■■■□ 3.15
COL20A1-204ENST00000455906 ZNF608Q9ULD9 1512 aaPredicted RBP34.67■■■■□ 3.14
COL20A1-204ENST00000455906 ABCC8Q09428 1581 aa34.62■■■■□ 3.13
COL20A1-204ENST00000455906 DNMBPQ6XZF7 1577 aa34.6■■■■□ 3.13
COL20A1-204ENST00000455906 EIF4G3O43432 1585 aaKnown RBP34.49■■■■□ 3.11
COL20A1-204ENST00000455906 TARBP1Q13395 1621 aaKnown RBP34.44■■■■□ 3.1
COL20A1-204ENST00000455906 POLA1P09884 1462 aaPredicted RBP34.38■■■■□ 3.09
COL20A1-204ENST00000455906 AQRO60306 1485 aaKnown RBP eCLIP34.34■■■■□ 3.09
COL20A1-204ENST00000455906 RIMBP3CA6NJZ7 1639 aa34.33■■■■□ 3.09
COL20A1-204ENST00000455906 RIMBP3BA6NNM3 1639 aa34.33■■■■□ 3.09
COL20A1-204ENST00000455906 RIMBP3Q9UFD9 1639 aa34.33■■■■□ 3.09
COL20A1-204ENST00000455906 RAD54L2Q9Y4B4 1467 aa34.24■■■■□ 3.07
COL20A1-204ENST00000455906 CHD1O14646 1710 aa34.23■■■■□ 3.07
COL20A1-204ENST00000455906 ARHGEF11O15085 1522 aa34.23■■■■□ 3.07
COL20A1-204ENST00000455906 SOGA1O94964 1423 aa34.18■■■■□ 3.06
COL20A1-204ENST00000455906 FGD5Q6ZNL6 1462 aa34.15■■■■□ 3.06
COL20A1-204ENST00000455906 CUX1P39880 1505 aa34.14■■■■□ 3.06
COL20A1-204ENST00000455906 TDRD9Q8NDG6 1382 aaKnown RBP34.11■■■■□ 3.05
COL20A1-204ENST00000455906 WDR97A6NE52 1622 aa34.08■■■■□ 3.05
COL20A1-204ENST00000455906 FBLN2P98095 1184 aa34.04■■■■□ 3.04
COL20A1-204ENST00000455906 SNAPC4Q5SXM2 1469 aa33.99■■■■□ 3.03
COL20A1-204ENST00000455906 SUPT5HO00267 1087 aaKnown RBP33.94■■■■□ 3.02
COL20A1-204ENST00000455906 CYB5RLQ6IPT4 315 aa33.92■■■■□ 3.02
COL20A1-204ENST00000455906 MAGI1Q96QZ7 1491 aaPredicted RBP33.9■■■■□ 3.02
COL20A1-204ENST00000455906 GRIN2BQ13224 1484 aa33.89■■■■□ 3.02
COL20A1-204ENST00000455906 ARAP1Q96P48 1450 aa33.89■■■■□ 3.02
COL20A1-204ENST00000455906 CLASP1Q7Z460 1538 aa33.85■■■■□ 3.01
COL20A1-204ENST00000455906 CHMP7Q8WUX9 453 aaPredicted RBP33.81■■■■□ 3
COL20A1-204ENST00000455906 PBRM1Q86U86 1689 aa33.8■■■■□ 3
COL20A1-204ENST00000455906 SYNJ2O15056 1496 aa33.79■■■■□ 3
COL20A1-204ENST00000455906 SYNJ1O43426 1573 aa33.78■■■■□ 3
COL20A1-204ENST00000455906 GAPVD1Q14C86 1478 aa33.78■■■■□ 3
COL20A1-204ENST00000455906 ABCA10Q8WWZ4 1543 aa33.77■■■■□ 3
COL20A1-204ENST00000455906 ABCA5Q8WWZ7 1642 aa33.75■■■□□ 2.99
COL20A1-204ENST00000455906 BIVM-ERCC5R4GMW8 1640 aa33.61■■■□□ 2.97
COL20A1-204ENST00000455906 WRNQ14191 1432 aaPredicted RBP eCLIP33.61■■■□□ 2.97
COL20A1-204ENST00000455906 TOP2BQ02880 1626 aa33.6■■■□□ 2.97
COL20A1-204ENST00000455906 TRHP20396 242 aaPredicted RBP33.5■■■□□ 2.95
COL20A1-204ENST00000455906 GRIN2AQ12879 1464 aa33.48■■■□□ 2.95
COL20A1-204ENST00000455906 ADAMTS12P58397 1594 aa33.47■■■□□ 2.95
COL20A1-204ENST00000455906 NUP160Q12769 1436 aa33.38■■■□□ 2.93
COL20A1-204ENST00000455906 CEP170Q5SW79 1584 aa33.38■■■□□ 2.93
COL20A1-204ENST00000455906 FHAD1B1AJZ9 1412 aa33.35■■■□□ 2.93
COL20A1-204ENST00000455906 ERICH3Q5RHP9 1530 aa33.34■■■□□ 2.93
COL20A1-204ENST00000455906 ERCC6L2Q5T890 1561 aa33.33■■■□□ 2.93
COL20A1-204ENST00000455906 SHROOM2Q13796 1616 aa33.24■■■□□ 2.91
COL20A1-204ENST00000455906 RUSC2Q8N2Y8 1516 aa33.02■■■□□ 2.88
COL20A1-204ENST00000455906 PRG4Q92954 1404 aaPredicted RBP33.02■■■□□ 2.88
COL20A1-204ENST00000455906 JPH4Q96JJ6 628 aa32.99■■■□□ 2.87
COL20A1-204ENST00000455906 IGF1RP08069 1367 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms